RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 KIF7Q2M1P5 1343 aa9.26□□□□□ -0.93
LDHA-223ENST00000545215 CLSPNQ9HAW4 1339 aa9.26□□□□□ -0.93
LDHA-223ENST00000545215 TCIRG1Q13488 830 aa9.26□□□□□ -0.93
LDHA-223ENST00000545215 MTMR2Q13614 643 aa9.26□□□□□ -0.93
LDHA-223ENST00000545215 HDGFL1Q5TGJ6 251 aa9.26□□□□□ -0.93
LDHA-223ENST00000545215 NBPF5PQ86XG9 351 aaPredicted RBP9.26□□□□□ -0.93
LDHA-223ENST00000545215 USP38Q8NB14 1042 aa9.26□□□□□ -0.93
LDHA-223ENST00000545215 EPHX3Q9H6B9 360 aa9.26□□□□□ -0.93
LDHA-223ENST00000545215 GGA3Q9NZ52 723 aa9.26□□□□□ -0.93
LDHA-223ENST00000545215 NCOR1O75376 2440 aa9.25□□□□□ -0.93
LDHA-223ENST00000545215 KRT37O76014 449 aa9.25□□□□□ -0.93
LDHA-223ENST00000545215 AEBP1Q8IUX7 1158 aa9.25□□□□□ -0.93
LDHA-223ENST00000545215 RABGEF1Q9UJ41 708 aa9.25□□□□□ -0.93
LDHA-223ENST00000545215 SSC5DA1L4H1 1573 aa9.25□□□□□ -0.93
LDHA-223ENST00000545215 SCN7AQ01118 1682 aa9.24□□□□□ -0.93
LDHA-223ENST00000545215 ASTN2O75129 1339 aaPredicted RBP9.24□□□□□ -0.93
LDHA-223ENST00000545215 CFAP99D6REC4 459 aa9.24□□□□□ -0.93
LDHA-223ENST00000545215 RGS20O76081 388 aa9.24□□□□□ -0.93
LDHA-223ENST00000545215 CCL5P13501 91 aa9.24□□□□□ -0.93
LDHA-223ENST00000545215 NHLH1Q02575 133 aa9.24□□□□□ -0.93
LDHA-223ENST00000545215 C7orf61Q8IZ16 206 aa9.24□□□□□ -0.93
LDHA-223ENST00000545215 HELBQ8NG08 1087 aaPredicted RBP9.24□□□□□ -0.93
LDHA-223ENST00000545215 U2AF1L4Q8WU68 220 aaKnown RBP9.24□□□□□ -0.93
LDHA-223ENST00000545215 LRRN4Q8WUT4 740 aa9.24□□□□□ -0.93
LDHA-223ENST00000545215 SLC12A5Q9H2X9 1139 aa9.24□□□□□ -0.93
LDHA-223ENST00000545215 TERF2IPQ9NYB0 399 aa9.24□□□□□ -0.93
LDHA-223ENST00000545215 FLT4P35916 1363 aa9.24□□□□□ -0.93
LDHA-223ENST00000545215 ALPK3Q96L96 1907 aa9.24□□□□□ -0.93
LDHA-223ENST00000545215 SYN1P17600 705 aa9.23□□□□□ -0.93
LDHA-223ENST00000545215 CAPN2P17655 700 aa9.23□□□□□ -0.93
LDHA-223ENST00000545215 PTPN12Q05209 780 aaKnown RBP9.23□□□□□ -0.93
LDHA-223ENST00000545215 MAP3K11Q16584 847 aa9.23□□□□□ -0.93
LDHA-223ENST00000545215 PBXIP1Q96AQ6 731 aa9.23□□□□□ -0.93
LDHA-223ENST00000545215 SLC4A5Q9BY07 1137 aa9.23□□□□□ -0.93
LDHA-223ENST00000545215 RTFDC1Q9BY42 306 aaPredicted RBP9.23□□□□□ -0.93
LDHA-223ENST00000545215 RNF208Q9H0X6 261 aa9.23□□□□□ -0.93
LDHA-223ENST00000545215 KIF24Q5T7B8 1368 aa9.23□□□□□ -0.93
LDHA-223ENST00000545215 YDJCA8MPS7 323 aa9.22□□□□□ -0.93
LDHA-223ENST00000545215 ST18O60284 1047 aa9.22□□□□□ -0.93
LDHA-223ENST00000545215 CAMTA2O94983 1202 aa9.22□□□□□ -0.93
LDHA-223ENST00000545215 SGPL1O95470 568 aa9.22□□□□□ -0.93
LDHA-223ENST00000545215 PSEN2P49810 448 aa9.22□□□□□ -0.93
LDHA-223ENST00000545215 MRPS5P82675 430 aaKnown RBP9.22□□□□□ -0.93
LDHA-223ENST00000545215 KIF4BQ2VIQ3 1234 aa9.22□□□□□ -0.93
LDHA-223ENST00000545215 CRY2Q49AN0 593 aa9.22□□□□□ -0.93
LDHA-223ENST00000545215 OTUD7BQ6GQQ9 843 aa9.22□□□□□ -0.93
LDHA-223ENST00000545215 TPTE2Q6XPS3 522 aa9.22□□□□□ -0.93
LDHA-223ENST00000545215 SLC51AQ86UW1 340 aa9.22□□□□□ -0.93
LDHA-223ENST00000545215 TMC1Q8TDI8 760 aa9.22□□□□□ -0.93
LDHA-223ENST00000545215 TTYH1Q9H313 450 aaPredicted RBP9.22□□□□□ -0.93
LDHA-223ENST00000545215 C11orf16Q9NQ32 467 aa9.22□□□□□ -0.93
LDHA-223ENST00000545215 RPS12P25398 132 aaKnown RBP9.21□□□□□ -0.94
LDHA-223ENST00000545215 HOXA10P31260 410 aaPredicted RBP9.21□□□□□ -0.94
LDHA-223ENST00000545215 PRMT2P55345 433 aa9.21□□□□□ -0.94
LDHA-223ENST00000545215 PDE4CQ08493 712 aa9.21□□□□□ -0.94
LDHA-223ENST00000545215 KIAA2012Q0VF49 1180 aa9.21□□□□□ -0.94
LDHA-223ENST00000545215 ANGEL2Q5VTE6 544 aaKnown RBP9.21□□□□□ -0.94
LDHA-223ENST00000545215 SUPT20HQ8NEM7 779 aa9.21□□□□□ -0.94
LDHA-223ENST00000545215 ALG2Q9H553 416 aa9.21□□□□□ -0.94
LDHA-223ENST00000545215 SEPT9Q9UHD8 586 aaPredicted RBP9.21□□□□□ -0.94
LDHA-223ENST00000545215 FAM205AQ6ZU69 1335 aa9.2□□□□□ -0.94
LDHA-223ENST00000545215 ST20-MTHFSA0A0A6YYL1 179 aa9.2□□□□□ -0.94
LDHA-223ENST00000545215 GNRH1P01148 92 aa9.2□□□□□ -0.94
LDHA-223ENST00000545215 MTHFSP49914 203 aa9.2□□□□□ -0.94
LDHA-223ENST00000545215 VAC14Q08AM6 782 aa9.2□□□□□ -0.94
LDHA-223ENST00000545215 FUT2Q10981 343 aa9.2□□□□□ -0.94
LDHA-223ENST00000545215 LDLRAD1Q5T700 205 aa9.2□□□□□ -0.94
LDHA-223ENST00000545215 C6orf229H3BNL8 230 aa9.19□□□□□ -0.94
LDHA-223ENST00000545215 SMIM22K7EJ46 135 aa9.19□□□□□ -0.94
LDHA-223ENST00000545215 PSMD14O00487 310 aa9.19□□□□□ -0.94
LDHA-223ENST00000545215 ZBTB48P10074 688 aaPredicted RBP9.19□□□□□ -0.94
LDHA-223ENST00000545215 SCARF1Q14162 830 aa9.19□□□□□ -0.94
LDHA-223ENST00000545215 POTEEQ6S8J3 1075 aa9.19□□□□□ -0.94
LDHA-223ENST00000545215 SLF2Q8IX21 1173 aa9.19□□□□□ -0.94
LDHA-223ENST00000545215 EPS8L1Q8TE68 723 aa9.19□□□□□ -0.94
LDHA-223ENST00000545215 PAWRQ96IZ0 340 aaKnown RBP9.19□□□□□ -0.94
LDHA-223ENST00000545215 NECAB3Q96P71 396 aaPredicted RBP9.19□□□□□ -0.94
LDHA-223ENST00000545215 PPP1R12CQ9BZL4 782 aa9.19□□□□□ -0.94
LDHA-223ENST00000545215 THEGQ9P2T0 379 aa9.19□□□□□ -0.94
LDHA-223ENST00000545215 ARHGAP33O14559 1287 aa9.18□□□□□ -0.94
LDHA-223ENST00000545215 CFHP08603 1231 aa9.18□□□□□ -0.94
LDHA-223ENST00000545215 GRK4P32298 578 aa9.18□□□□□ -0.94
LDHA-223ENST00000545215 PRAMEF18Q5VWM3 479 aa9.18□□□□□ -0.94
LDHA-223ENST00000545215 CCER1Q8TC90 406 aaPredicted RBP9.18□□□□□ -0.94
LDHA-223ENST00000545215 TSC1Q92574 1164 aa9.18□□□□□ -0.94
LDHA-223ENST00000545215 PTPN18Q99952 460 aa9.18□□□□□ -0.94
LDHA-223ENST00000545215 ARHGAP39Q9C0H5 1083 aa9.18□□□□□ -0.94
LDHA-223ENST00000545215 LAMB1P07942 1786 aa9.18□□□□□ -0.94
LDHA-223ENST00000545215 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.17□□□□□ -0.94
LDHA-223ENST00000545215 TCERG1O14776 1098 aaKnown RBP9.17□□□□□ -0.94
LDHA-223ENST00000545215 STARD3NLO95772 234 aa9.17□□□□□ -0.94
LDHA-223ENST00000545215 TFRCP02786 760 aaKnown RBP9.17□□□□□ -0.94
LDHA-223ENST00000545215 IL6STP40189 918 aaPredicted RBP9.17□□□□□ -0.94
LDHA-223ENST00000545215 SLC4A3P48751 1232 aa9.17□□□□□ -0.94
LDHA-223ENST00000545215 KCTD2Q14681 263 aa9.17□□□□□ -0.94
LDHA-223ENST00000545215 CLEC4GQ6UXB4 293 aa9.17□□□□□ -0.94
LDHA-223ENST00000545215 NECAB2Q7Z6G3 386 aa9.17□□□□□ -0.94
LDHA-223ENST00000545215 SLC10A4Q96EP9 437 aa9.17□□□□□ -0.94
LDHA-223ENST00000545215 CDH23Q9H251 3354 aa9.17□□□□□ -0.94
LDHA-223ENST00000545215 RFX1P22670 979 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms