RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 OTOFQ9HC10 1997 aa14.99□□□□□ -0.01
GABPB1-206ENST00000543881 UTYO14607 1347 aa14.98□□□□□ -0.01
GABPB1-206ENST00000543881 LDHAL6AQ6ZMR3 332 aa14.98□□□□□ -0.01
GABPB1-206ENST00000543881 ZNF804AQ7Z570 1209 aa14.98□□□□□ -0.01
GABPB1-206ENST00000543881 SSH1Q8WYL5 1049 aa14.98□□□□□ -0.01
GABPB1-206ENST00000543881 ELP3Q9H9T3 547 aa14.98□□□□□ -0.01
GABPB1-206ENST00000543881 COLQQ9Y215 455 aaPredicted RBP14.98□□□□□ -0.01
GABPB1-206ENST00000543881 JAG2Q9Y219 1238 aa14.98□□□□□ -0.01
GABPB1-206ENST00000543881 SLC9C1Q4G0N8 1177 aa14.97□□□□□ -0.01
GABPB1-206ENST00000543881 NBPF11Q86T75 865 aa14.97□□□□□ -0.01
GABPB1-206ENST00000543881 MS4A4AQ96JQ5 239 aa14.97□□□□□ -0.01
GABPB1-206ENST00000543881 PLIN1O60240 522 aa14.96□□□□□ -0.01
GABPB1-206ENST00000543881 ARHGEF6Q15052 776 aa14.96□□□□□ -0.01
GABPB1-206ENST00000543881 TAF7LQ5H9L4 462 aa14.96□□□□□ -0.01
GABPB1-206ENST00000543881 PUS3Q9BZE2 481 aaKnown RBP14.96□□□□□ -0.01
GABPB1-206ENST00000543881 PTCH2Q9Y6C5 1203 aa14.96□□□□□ -0.01
GABPB1-206ENST00000543881 TNFAIP1Q13829 316 aa14.95□□□□□ -0.02
GABPB1-206ENST00000543881 TAF1CQ15572 869 aaPredicted RBP14.95□□□□□ -0.02
GABPB1-206ENST00000543881 SLC4A8Q2Y0W8 1093 aa14.95□□□□□ -0.02
GABPB1-206ENST00000543881 BRI3BPQ8WY22 251 aa14.95□□□□□ -0.02
GABPB1-206ENST00000543881 BICC1Q9H694 974 aaKnown RBP14.95□□□□□ -0.02
GABPB1-206ENST00000543881 ZFYVE28Q9HCC9 887 aa14.95□□□□□ -0.02
GABPB1-206ENST00000543881 CNNM1Q9NRU3 951 aa14.95□□□□□ -0.02
GABPB1-206ENST00000543881 PTPRCP08575 1304 aa14.95□□□□□ -0.02
GABPB1-206ENST00000543881 RABL6Q3YEC7 729 aaPredicted RBP14.95□□□□□ -0.02
GABPB1-206ENST00000543881 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.95□□□□□ -0.02
GABPB1-206ENST00000543881 TRMT2AQ8IZ69 625 aaKnown RBP14.95□□□□□ -0.02
GABPB1-206ENST00000543881 ANKRD44Q8N8A2 993 aa14.95□□□□□ -0.02
GABPB1-206ENST00000543881 CNKSR2Q8WXI2 1034 aa14.95□□□□□ -0.02
GABPB1-206ENST00000543881 ZNF70Q9UC06 446 aaPredicted RBP14.95□□□□□ -0.02
GABPB1-206ENST00000543881 CCL15-CCL14A0A0B4J2E2 113 aa14.94□□□□□ -0.02
GABPB1-206ENST00000543881 MYCP01106 439 aaPredicted RBP14.94□□□□□ -0.02
GABPB1-206ENST00000543881 GTF2A2P52657 109 aa14.94□□□□□ -0.02
GABPB1-206ENST00000543881 CCL15Q16663 113 aa14.94□□□□□ -0.02
GABPB1-206ENST00000543881 SPDYE2Q495Y8 402 aa14.94□□□□□ -0.02
GABPB1-206ENST00000543881 TDRD3Q9H7E2 651 aaKnown RBP14.94□□□□□ -0.02
GABPB1-206ENST00000543881 RIPOR2Q9Y4F9 1068 aa14.94□□□□□ -0.02
GABPB1-206ENST00000543881 FAM205AQ6ZU69 1335 aa14.93□□□□□ -0.02
GABPB1-206ENST00000543881 VGLL4Q14135 290 aa14.93□□□□□ -0.02
GABPB1-206ENST00000543881 MFSD14BQ5SR56 506 aa14.93□□□□□ -0.02
GABPB1-206ENST00000543881 CDAN1Q8IWY9 1227 aa14.93□□□□□ -0.02
GABPB1-206ENST00000543881 FAM43AQ8N2R8 423 aa14.93□□□□□ -0.02
GABPB1-206ENST00000543881 TEPSINQ96N21 525 aa14.93□□□□□ -0.02
GABPB1-206ENST00000543881 USP44Q9H0E7 712 aa14.93□□□□□ -0.02
GABPB1-206ENST00000543881 SERPINA10Q9UK55 444 aa14.93□□□□□ -0.02
GABPB1-206ENST00000543881 TCP10L2B9ZVM9 353 aa14.92□□□□□ -0.02
GABPB1-206ENST00000543881 MAP3K9P80192 1104 aa14.92□□□□□ -0.02
GABPB1-206ENST00000543881 TMEM39BQ9GZU3 492 aa14.92□□□□□ -0.02
GABPB1-206ENST00000543881 TTF2Q9UNY4 1162 aaKnown RBP14.92□□□□□ -0.02
GABPB1-206ENST00000543881 H0YGN5 161 aa14.91□□□□□ -0.02
GABPB1-206ENST00000543881 GYG1P46976 350 aa14.91□□□□□ -0.02
GABPB1-206ENST00000543881 UBE4AQ14139 1066 aa14.91□□□□□ -0.02
GABPB1-206ENST00000543881 ALDH1L2Q3SY69 923 aa14.91□□□□□ -0.02
GABPB1-206ENST00000543881 LRRC24Q50LG9 513 aa14.91□□□□□ -0.02
GABPB1-206ENST00000543881 DZIP1LQ8IYY4 767 aaKnown RBP14.91□□□□□ -0.02
GABPB1-206ENST00000543881 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.91□□□□□ -0.02
GABPB1-206ENST00000543881 SH3TC2Q8TF17 1288 aa14.91□□□□□ -0.02
GABPB1-206ENST00000543881 OTUD5Q96G74 571 aa14.91□□□□□ -0.02
GABPB1-206ENST00000543881 FAM84BQ96KN1 310 aaPredicted RBP14.91□□□□□ -0.02
GABPB1-206ENST00000543881 CSADQ9Y600 493 aa14.91□□□□□ -0.02
GABPB1-206ENST00000543881 ARAP2Q8WZ64 1704 aa14.91□□□□□ -0.02
GABPB1-206ENST00000543881 ZSWIM8A7E2V4 1837 aa14.9□□□□□ -0.02
GABPB1-206ENST00000543881 CCER2I3L3R5 266 aa14.9□□□□□ -0.02
GABPB1-206ENST00000543881 WDHD1O75717 1129 aaPredicted RBP14.9□□□□□ -0.02
GABPB1-206ENST00000543881 TNNI2P48788 182 aa14.9□□□□□ -0.02
GABPB1-206ENST00000543881 TDRD7Q8NHU6 1098 aaKnown RBP14.9□□□□□ -0.02
GABPB1-206ENST00000543881 KLHDC4Q8TBB5 520 aa14.9□□□□□ -0.02
GABPB1-206ENST00000543881 ARHGAP39Q9C0H5 1083 aa14.9□□□□□ -0.02
GABPB1-206ENST00000543881 SMC4Q9NTJ3 1288 aa14.9□□□□□ -0.02
GABPB1-206ENST00000543881 TLR2O60603 784 aa14.89□□□□□ -0.03
GABPB1-206ENST00000543881 HIBADHP31937 336 aaKnown RBP14.89□□□□□ -0.03
GABPB1-206ENST00000543881 CRKP46108 304 aa14.89□□□□□ -0.03
GABPB1-206ENST00000543881 KIF22Q14807 665 aa14.89□□□□□ -0.03
GABPB1-206ENST00000543881 MROH5Q6ZUA9 1318 aa14.89□□□□□ -0.03
GABPB1-206ENST00000543881 SPDYE5A6NIY4 337 aa14.89□□□□□ -0.03
GABPB1-206ENST00000543881 LACTBP83111 547 aaPredicted RBP14.89□□□□□ -0.03
GABPB1-206ENST00000543881 VGLL2Q8N8G2 317 aa14.89□□□□□ -0.03
GABPB1-206ENST00000543881 TRIOBPQ9H2D6 2365 aa14.88□□□□□ -0.03
GABPB1-206ENST00000543881 CEP290O15078 2479 aa14.88□□□□□ -0.03
GABPB1-206ENST00000543881 CETPP11597 493 aa14.88□□□□□ -0.03
GABPB1-206ENST00000543881 CHRDL2Q6WN34 429 aa14.88□□□□□ -0.03
GABPB1-206ENST00000543881 FBXO33Q7Z6M2 555 aa14.88□□□□□ -0.03
GABPB1-206ENST00000543881 ZCCHC17Q9NP64 241 aaKnown RBP14.88□□□□□ -0.03
GABPB1-206ENST00000543881 SNCAIPQ9Y6H5 919 aa14.88□□□□□ -0.03
GABPB1-206ENST00000543881 BTBD19C9JJ37 291 aa14.87□□□□□ -0.03
GABPB1-206ENST00000543881 PDE8BO95263 885 aa14.87□□□□□ -0.03
GABPB1-206ENST00000543881 GNRH1P01148 92 aa14.87□□□□□ -0.03
GABPB1-206ENST00000543881 RFX5P48382 616 aaPredicted RBP14.87□□□□□ -0.03
GABPB1-206ENST00000543881 METTL24Q5JXM2 366 aa14.87□□□□□ -0.03
GABPB1-206ENST00000543881 ERO1BQ86YB8 467 aa14.87□□□□□ -0.03
GABPB1-206ENST00000543881 NOB1Q9ULX3 412 aaKnown RBP14.87□□□□□ -0.03
GABPB1-206ENST00000543881 IQSEC3Q9UPP2 1182 aaPredicted RBP14.87□□□□□ -0.03
GABPB1-206ENST00000543881 CACNB3P54284 484 aa14.86□□□□□ -0.03
GABPB1-206ENST00000543881 PRMT2P55345 433 aa14.86□□□□□ -0.03
GABPB1-206ENST00000543881 SNAPC2Q13487 334 aa14.86□□□□□ -0.03
GABPB1-206ENST00000543881 GRIK5Q16478 980 aa14.86□□□□□ -0.03
GABPB1-206ENST00000543881 DPF3Q92784 378 aa14.86□□□□□ -0.03
GABPB1-206ENST00000543881 ZKSCAN4Q969J2 545 aaPredicted RBP14.86□□□□□ -0.03
GABPB1-206ENST00000543881 IRF6O14896 467 aa14.85□□□□□ -0.03
GABPB1-206ENST00000543881 ECM2O94769 699 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms