RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 EDARADDQ8WWZ3 215 aa12.65□□□□□ -0.38
MRPS35-204ENST00000542199 FRMD6Q96NE9 622 aa12.65□□□□□ -0.38
MRPS35-204ENST00000542199 RBSNQ9H1K0 784 aa12.65□□□□□ -0.38
MRPS35-204ENST00000542199 SIGLEC1Q9BZZ2 1709 aa12.65□□□□□ -0.38
MRPS35-204ENST00000542199 C9orf84Q5VXU9 1444 aa12.64□□□□□ -0.39
MRPS35-204ENST00000542199 ALBP02768 609 aa12.64□□□□□ -0.39
MRPS35-204ENST00000542199 VAMP1P23763 118 aa12.64□□□□□ -0.39
MRPS35-204ENST00000542199 LDLRAD1Q5T700 205 aa12.64□□□□□ -0.39
MRPS35-204ENST00000542199 CEP135Q66GS9 1140 aa12.64□□□□□ -0.39
MRPS35-204ENST00000542199 PRPF40BQ6NWY9 871 aaKnown RBP12.64□□□□□ -0.39
MRPS35-204ENST00000542199 TMEM102Q8N9M5 508 aaPredicted RBP12.64□□□□□ -0.39
MRPS35-204ENST00000542199 NXPE3Q969Y0 559 aa12.64□□□□□ -0.39
MRPS35-204ENST00000542199 POP1Q99575 1024 aaKnown RBP12.64□□□□□ -0.39
MRPS35-204ENST00000542199 TRIM33Q9UPN9 1127 aa12.64□□□□□ -0.39
MRPS35-204ENST00000542199 PDE2AO00408 941 aaPredicted RBP12.63□□□□□ -0.39
MRPS35-204ENST00000542199 OIP5O43482 229 aa12.63□□□□□ -0.39
MRPS35-204ENST00000542199 CELA2BP08218 269 aaPredicted RBP12.63□□□□□ -0.39
MRPS35-204ENST00000542199 USP17L7P0C7H9 530 aa12.63□□□□□ -0.39
MRPS35-204ENST00000542199 ALAS2P22557 587 aa12.63□□□□□ -0.39
MRPS35-204ENST00000542199 GRIA4P48058 902 aa12.63□□□□□ -0.39
MRPS35-204ENST00000542199 BACH2Q9BYV9 841 aa12.63□□□□□ -0.39
MRPS35-204ENST00000542199 ARHGEF12Q9NZN5 1544 aa12.62□□□□□ -0.39
MRPS35-204ENST00000542199 PREX2Q70Z35 1606 aa12.62□□□□□ -0.39
MRPS35-204ENST00000542199 MLH3Q9UHC1 1453 aa12.62□□□□□ -0.39
MRPS35-204ENST00000542199 GIPC1O14908 333 aa12.62□□□□□ -0.39
MRPS35-204ENST00000542199 BCRP11274 1271 aa12.62□□□□□ -0.39
MRPS35-204ENST00000542199 FCGRTP55899 365 aa12.62□□□□□ -0.39
MRPS35-204ENST00000542199 SPRED3Q2MJR0 410 aa12.62□□□□□ -0.39
MRPS35-204ENST00000542199 BHLHE41Q9C0J9 482 aaPredicted RBP12.62□□□□□ -0.39
MRPS35-204ENST00000542199 BCL11AQ9H165 835 aa12.62□□□□□ -0.39
MRPS35-204ENST00000542199 TRAK1Q9UPV9 953 aa12.62□□□□□ -0.39
MRPS35-204ENST00000542199 CDC42BPBQ9Y5S2 1711 aa12.62□□□□□ -0.39
MRPS35-204ENST00000542199 ABCC1P33527 1531 aa12.62□□□□□ -0.39
MRPS35-204ENST00000542199 TRAPPC8Q9Y2L5 1435 aa12.62□□□□□ -0.39
MRPS35-204ENST00000542199 C8orf86Q6ZUL3 223 aa12.61□□□□□ -0.39
MRPS35-204ENST00000542199 CHSY3Q70JA7 882 aa12.61□□□□□ -0.39
MRPS35-204ENST00000542199 MICALL1Q8N3F8 863 aa12.61□□□□□ -0.39
MRPS35-204ENST00000542199 ASAP3Q8TDY4 903 aa12.61□□□□□ -0.39
MRPS35-204ENST00000542199 LACRTQ9GZZ8 138 aa12.61□□□□□ -0.39
MRPS35-204ENST00000542199 FRRS1LQ9P0K9 344 aa12.61□□□□□ -0.39
MRPS35-204ENST00000542199 GPATCH8Q9UKJ3 1502 aaKnown RBP12.61□□□□□ -0.39
MRPS35-204ENST00000542199 LMTK3Q96Q04 1460 aa12.6□□□□□ -0.39
MRPS35-204ENST00000542199 TMEM238LA0A1B0GVL6 79 aa12.6□□□□□ -0.39
MRPS35-204ENST00000542199 SMNDC1O75940 238 aaKnown RBP eCLIP12.6□□□□□ -0.39
MRPS35-204ENST00000542199 MLECQ14165 292 aa12.6□□□□□ -0.39
MRPS35-204ENST00000542199 C20orf204Q6ZNR8 217 aa12.6□□□□□ -0.39
MRPS35-204ENST00000542199 C3orf58Q8NDZ4 430 aa12.6□□□□□ -0.39
MRPS35-204ENST00000542199 FAM8A1Q9UBU6 413 aa12.6□□□□□ -0.39
MRPS35-204ENST00000542199 CEP162Q5TB80 1403 aa12.6□□□□□ -0.39
MRPS35-204ENST00000542199 RIMS1Q86UR5 1692 aaKnown RBP12.6□□□□□ -0.39
MRPS35-204ENST00000542199 RGS9O75916 674 aaPredicted RBP12.59□□□□□ -0.39
MRPS35-204ENST00000542199 MEI1Q5TIA1 1274 aa12.59□□□□□ -0.39
MRPS35-204ENST00000542199 CRELD1Q96HD1 420 aa12.59□□□□□ -0.39
MRPS35-204ENST00000542199 BTBD6Q96KE9 485 aa12.59□□□□□ -0.39
MRPS35-204ENST00000542199 SRCIN1Q9C0H9 1055 aa12.59□□□□□ -0.39
MRPS35-204ENST00000542199 JPH1Q9HDC5 661 aaPredicted RBP12.59□□□□□ -0.39
MRPS35-204ENST00000542199 DIP2CQ9Y2E4 1556 aa12.59□□□□□ -0.39
MRPS35-204ENST00000542199 M0R082 166 aa12.58□□□□□ -0.4
MRPS35-204ENST00000542199 GRIK5Q16478 980 aa12.58□□□□□ -0.4
MRPS35-204ENST00000542199 ZNF385CQ66K41 422 aaPredicted RBP12.58□□□□□ -0.4
MRPS35-204ENST00000542199 GDF6Q6KF10 455 aaPredicted RBP12.58□□□□□ -0.4
MRPS35-204ENST00000542199 ZNF417Q8TAU3 575 aa12.58□□□□□ -0.4
MRPS35-204ENST00000542199 ZNF587Q96SQ5 575 aaPredicted RBP12.58□□□□□ -0.4
MRPS35-204ENST00000542199 MUC3BQ9H195 1237 aa12.58□□□□□ -0.4
MRPS35-204ENST00000542199 REREQ9P2R6 1566 aa12.58□□□□□ -0.4
MRPS35-204ENST00000542199 A0A096LPE4 126 aa12.57□□□□□ -0.4
MRPS35-204ENST00000542199 A0A1W2PPZ6 126 aa12.57□□□□□ -0.4
MRPS35-204ENST00000542199 CDC42BPAQ5VT25 1732 aa12.57□□□□□ -0.4
MRPS35-204ENST00000542199 MTUS2Q5JR59 1369 aa12.56□□□□□ -0.4
MRPS35-204ENST00000542199 AMPD1P23109 780 aa12.56□□□□□ -0.4
MRPS35-204ENST00000542199 GSTT1P30711 240 aa12.56□□□□□ -0.4
MRPS35-204ENST00000542199 TMEM87AQ8NBN3 555 aa12.56□□□□□ -0.4
MRPS35-204ENST00000542199 CCNB3Q8WWL7 1395 aa12.56□□□□□ -0.4
MRPS35-204ENST00000542199 ABCA6Q8N139 1617 aa12.55□□□□□ -0.4
MRPS35-204ENST00000542199 KIAA1107Q9UPP5 1409 aa12.55□□□□□ -0.4
MRPS35-204ENST00000542199 ITSN2Q9NZM3 1697 aa12.55□□□□□ -0.4
MRPS35-204ENST00000542199 KANK3Q6NY19 840 aa12.55□□□□□ -0.4
MRPS35-204ENST00000542199 DTHD1Q6ZMT9 781 aa12.55□□□□□ -0.4
MRPS35-204ENST00000542199 SH2B1Q9NRF2 756 aaPredicted RBP12.55□□□□□ -0.4
MRPS35-204ENST00000542199 CFDP1Q9UEE9 299 aaPredicted RBP12.55□□□□□ -0.4
MRPS35-204ENST00000542199 AGLP35573 1532 aa12.55□□□□□ -0.4
MRPS35-204ENST00000542199 SAMD9LQ8IVG5 1584 aa12.55□□□□□ -0.4
MRPS35-204ENST00000542199 SYCP2Q9BX26 1530 aa12.54□□□□□ -0.4
MRPS35-204ENST00000542199 PTPRAP18433 802 aa12.54□□□□□ -0.4
MRPS35-204ENST00000542199 ITPKAP23677 461 aa12.54□□□□□ -0.4
MRPS35-204ENST00000542199 AFF1P51825 1210 aaKnown RBP12.54□□□□□ -0.4
MRPS35-204ENST00000542199 SVOPQ8N4V2 548 aa12.54□□□□□ -0.4
MRPS35-204ENST00000542199 TTC9Q92623 222 aa12.54□□□□□ -0.4
MRPS35-204ENST00000542199 IGSF5Q9NSI5 407 aa12.54□□□□□ -0.4
MRPS35-204ENST00000542199 LRRC4BQ9NT99 713 aa12.54□□□□□ -0.4
MRPS35-204ENST00000542199 PPP4R2Q9NY27 417 aa12.54□□□□□ -0.4
MRPS35-204ENST00000542199 SOX13Q9UN79 622 aa12.54□□□□□ -0.4
MRPS35-204ENST00000542199 AKAP2Q9Y2D5 859 aa12.54□□□□□ -0.4
MRPS35-204ENST00000542199 FER1L4A9Z1Z3 1794 aa12.53□□□□□ -0.4
MRPS35-204ENST00000542199 PLEKHH2Q8IVE3 1493 aa12.53□□□□□ -0.4
MRPS35-204ENST00000542199 FBXO24O75426 580 aa12.53□□□□□ -0.4
MRPS35-204ENST00000542199 ITGAEP38570 1179 aa12.53□□□□□ -0.4
MRPS35-204ENST00000542199 BSNDQ8WZ55 320 aa12.53□□□□□ -0.4
MRPS35-204ENST00000542199 ZNF576Q9H609 170 aa12.53□□□□□ -0.4
MRPS35-204ENST00000542199 EHBP1L1Q8N3D4 1523 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms