RNA–Protein interactions for RNA: ENST00000540301.1

KLHL42-203, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-203ENST00000540301 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.65□□□□□ -0.7
KLHL42-203ENST00000540301 CDC5LQ99459 802 aaKnown RBP10.65□□□□□ -0.7
KLHL42-203ENST00000540301 BSDC1Q9NW68 430 aaPredicted RBP10.65□□□□□ -0.7
KLHL42-203ENST00000540301 LEMD3Q9Y2U8 911 aa10.65□□□□□ -0.7
KLHL42-203ENST00000540301 KLRK1P26718 216 aa10.64□□□□□ -0.71
KLHL42-203ENST00000540301 RBM5P52756 815 aaKnown RBP eCLIP10.64□□□□□ -0.71
KLHL42-203ENST00000540301 FCGRTP55899 365 aa10.64□□□□□ -0.71
KLHL42-203ENST00000540301 SNAPC2Q13487 334 aa10.64□□□□□ -0.71
KLHL42-203ENST00000540301 TNFAIP1Q13829 316 aa10.64□□□□□ -0.71
KLHL42-203ENST00000540301 DIS3LQ8TF46 1054 aaKnown RBP10.64□□□□□ -0.71
KLHL42-203ENST00000540301 CRISPLD2Q9H0B8 497 aa10.64□□□□□ -0.71
KLHL42-203ENST00000540301 BABAM1Q9NWV8 329 aa10.64□□□□□ -0.71
KLHL42-203ENST00000540301 IRF6O14896 467 aa10.63□□□□□ -0.71
KLHL42-203ENST00000540301 ADCY3O60266 1144 aa10.63□□□□□ -0.71
KLHL42-203ENST00000540301 INHAP05111 366 aa10.63□□□□□ -0.71
KLHL42-203ENST00000540301 ERO1BQ86YB8 467 aa10.63□□□□□ -0.71
KLHL42-203ENST00000540301 CDAN1Q8IWY9 1227 aa10.63□□□□□ -0.71
KLHL42-203ENST00000540301 MAFAQ8NHW3 353 aaPredicted RBP10.63□□□□□ -0.71
KLHL42-203ENST00000540301 JARID2Q92833 1246 aaPredicted RBP10.63□□□□□ -0.71
KLHL42-203ENST00000540301 PLEKHF1Q96S99 279 aa10.63□□□□□ -0.71
KLHL42-203ENST00000540301 CD209Q9NNX6 404 aa10.63□□□□□ -0.71
KLHL42-203ENST00000540301 SPINK5Q9NQ38 1064 aaPredicted RBP10.63□□□□□ -0.71
KLHL42-203ENST00000540301 PAK6Q9NQU5 681 aaPredicted RBP10.63□□□□□ -0.71
KLHL42-203ENST00000540301 GABRQQ9UN88 632 aa10.63□□□□□ -0.71
KLHL42-203ENST00000540301 FAM205AQ6ZU69 1335 aa10.62□□□□□ -0.71
KLHL42-203ENST00000540301 ADGRA2Q96PE1 1338 aa10.62□□□□□ -0.71
KLHL42-203ENST00000540301 PCCAP05165 728 aaPredicted RBP10.62□□□□□ -0.71
KLHL42-203ENST00000540301 ELNP15502 786 aa10.62□□□□□ -0.71
KLHL42-203ENST00000540301 ZNF697Q5TEC3 545 aa10.62□□□□□ -0.71
KLHL42-203ENST00000540301 RIC3Q7Z5B4 369 aa10.62□□□□□ -0.71
KLHL42-203ENST00000540301 TEPSINQ96N21 525 aa10.62□□□□□ -0.71
KLHL42-203ENST00000540301 DBF4Q9UBU7 674 aaPredicted RBP10.62□□□□□ -0.71
KLHL42-203ENST00000540301 SNCAIPQ9Y6H5 919 aa10.62□□□□□ -0.71
KLHL42-203ENST00000540301 SPTBN5Q9NRC6 3674 aaKnown RBP10.62□□□□□ -0.71
KLHL42-203ENST00000540301 TNFRSF10AO00220 468 aa10.61□□□□□ -0.71
KLHL42-203ENST00000540301 PDHXO00330 501 aa10.61□□□□□ -0.71
KLHL42-203ENST00000540301 PPP2R1AP30153 589 aa10.61□□□□□ -0.71
KLHL42-203ENST00000540301 PPIL2Q13356 520 aa10.61□□□□□ -0.71
KLHL42-203ENST00000540301 KRT24Q2M2I5 525 aa10.61□□□□□ -0.71
KLHL42-203ENST00000540301 SPDYE2Q495Y8 402 aa10.61□□□□□ -0.71
KLHL42-203ENST00000540301 HDGFL1Q5TGJ6 251 aa10.61□□□□□ -0.71
KLHL42-203ENST00000540301 ANKRD23Q86SG2 305 aa10.61□□□□□ -0.71
KLHL42-203ENST00000540301 ANKLE1Q8NAG6 615 aa10.61□□□□□ -0.71
KLHL42-203ENST00000540301 CCDC191Q8NCU4 936 aa10.61□□□□□ -0.71
KLHL42-203ENST00000540301 PXYLP1Q8TE99 480 aa10.61□□□□□ -0.71
KLHL42-203ENST00000540301 CDX2Q99626 313 aaPredicted RBP10.61□□□□□ -0.71
KLHL42-203ENST00000540301 NBPF3Q9H094 633 aa10.61□□□□□ -0.71
KLHL42-203ENST00000540301 ZNF70Q9UC06 446 aaPredicted RBP10.61□□□□□ -0.71
KLHL42-203ENST00000540301 TCP10L2B9ZVM9 353 aa10.6□□□□□ -0.71
KLHL42-203ENST00000540301 KCNJ4P48050 445 aa10.6□□□□□ -0.71
KLHL42-203ENST00000540301 FLT3LGP49771 235 aa10.6□□□□□ -0.71
KLHL42-203ENST00000540301 CTSWP56202 376 aa10.6□□□□□ -0.71
KLHL42-203ENST00000540301 MYD88Q99836 296 aa10.6□□□□□ -0.71
KLHL42-203ENST00000540301 TMEM39BQ9GZU3 492 aa10.6□□□□□ -0.71
KLHL42-203ENST00000540301 ANKRD2Q9GZV1 360 aa10.6□□□□□ -0.71
KLHL42-203ENST00000540301 TDRD3Q9H7E2 651 aaKnown RBP10.6□□□□□ -0.71
KLHL42-203ENST00000540301 HYPKQ9NX55 129 aa10.6□□□□□ -0.71
KLHL42-203ENST00000540301 MAPK8IP3Q9UPT6 1336 aa10.59□□□□□ -0.71
KLHL42-203ENST00000540301 SPEF2Q9C093 1822 aa10.59□□□□□ -0.71
KLHL42-203ENST00000540301 TMEM265A0A087WTH1 108 aa10.59□□□□□ -0.71
KLHL42-203ENST00000540301 IGHMBP2P38935 993 aaKnown RBP10.59□□□□□ -0.71
KLHL42-203ENST00000540301 TNNI2P48788 182 aa10.59□□□□□ -0.71
KLHL42-203ENST00000540301 FKBP1AP62942 108 aaKnown RBP10.59□□□□□ -0.71
KLHL42-203ENST00000540301 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.59□□□□□ -0.71
KLHL42-203ENST00000540301 TTLL11Q8NHH1 800 aa10.59□□□□□ -0.71
KLHL42-203ENST00000540301 ZKSCAN4Q969J2 545 aaPredicted RBP10.59□□□□□ -0.71
KLHL42-203ENST00000540301 WRNIP1Q96S55 665 aa10.59□□□□□ -0.71
KLHL42-203ENST00000540301 C11orf49Q9H6J7 331 aa10.59□□□□□ -0.71
KLHL42-203ENST00000540301 GREM2Q9H772 168 aa10.59□□□□□ -0.71
KLHL42-203ENST00000540301 CWC25Q9NXE8 425 aaPredicted RBP10.59□□□□□ -0.71
KLHL42-203ENST00000540301 MGAMO43451 1857 aa10.59□□□□□ -0.71
KLHL42-203ENST00000540301 TTC28Q96AY4 2481 aa10.59□□□□□ -0.71
KLHL42-203ENST00000540301 BCRP11274 1271 aa10.58□□□□□ -0.72
KLHL42-203ENST00000540301 MDM2Q00987 491 aaPredicted RBP10.58□□□□□ -0.72
KLHL42-203ENST00000540301 PPATQ06203 517 aa10.58□□□□□ -0.72
KLHL42-203ENST00000540301 GOLGA2Q08379 1002 aa10.58□□□□□ -0.72
KLHL42-203ENST00000540301 IRF5Q13568 498 aa10.58□□□□□ -0.72
KLHL42-203ENST00000540301 PARK7Q99497 189 aaKnown RBP10.58□□□□□ -0.72
KLHL42-203ENST00000540301 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.58□□□□□ -0.72
KLHL42-203ENST00000540301 JAG2Q9Y219 1238 aa10.58□□□□□ -0.72
KLHL42-203ENST00000540301 SLC4A2P04920 1241 aa10.57□□□□□ -0.72
KLHL42-203ENST00000540301 RIPK4P57078 832 aa10.57□□□□□ -0.72
KLHL42-203ENST00000540301 TJAP1Q5JTD0 557 aa10.57□□□□□ -0.72
KLHL42-203ENST00000540301 PNNQ9H307 717 aaKnown RBP10.57□□□□□ -0.72
KLHL42-203ENST00000540301 SEMA6BQ9H3T3 888 aa10.57□□□□□ -0.72
KLHL42-203ENST00000540301 TAOK2Q9UL54 1235 aa10.57□□□□□ -0.72
KLHL42-203ENST00000540301 COL2A1P02458 1487 aaPredicted RBP10.56□□□□□ -0.72
KLHL42-203ENST00000540301 TNPO2O14787 897 aaKnown RBP10.56□□□□□ -0.72
KLHL42-203ENST00000540301 HOXB7P09629 217 aa10.56□□□□□ -0.72
KLHL42-203ENST00000540301 CYP2C8P10632 490 aa10.56□□□□□ -0.72
KLHL42-203ENST00000540301 IL1R1P14778 569 aa10.56□□□□□ -0.72
KLHL42-203ENST00000540301 MAP3K12Q12852 859 aa10.56□□□□□ -0.72
KLHL42-203ENST00000540301 DZIP1LQ8IYY4 767 aaKnown RBP10.56□□□□□ -0.72
KLHL42-203ENST00000540301 MYLIPQ8WY64 445 aa10.56□□□□□ -0.72
KLHL42-203ENST00000540301 MPHOSPH8Q99549 860 aa10.56□□□□□ -0.72
KLHL42-203ENST00000540301 SERPINA10Q9UK55 444 aa10.56□□□□□ -0.72
KLHL42-203ENST00000540301 ARAP2Q8WZ64 1704 aa10.55□□□□□ -0.72
KLHL42-203ENST00000540301 CHL1O00533 1208 aa10.55□□□□□ -0.72
KLHL42-203ENST00000540301 CHRNDQ07001 517 aa10.55□□□□□ -0.72
KLHL42-203ENST00000540301 ZNF804AQ7Z570 1209 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms