RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 GPR101Q96P66 508 aaPredicted RBP20.24■□□□□ 0.83
PCDHB17P-201ENST00000539533 NSFL1CQ9UNZ2 370 aaKnown RBP20.24■□□□□ 0.83
PCDHB17P-201ENST00000539533 ANKRD31Q8N7Z5 1873 aa20.23■□□□□ 0.83
PCDHB17P-201ENST00000539533 DEFB132Q7Z7B7 95 aa20.23■□□□□ 0.83
PCDHB17P-201ENST00000539533 LEMD3Q9Y2U8 911 aa20.23■□□□□ 0.83
PCDHB17P-201ENST00000539533 ZDHHC9Q9Y397 364 aa20.23■□□□□ 0.83
PCDHB17P-201ENST00000539533 BBOX1O75936 387 aa20.23■□□□□ 0.83
PCDHB17P-201ENST00000539533 LARGE1O95461 756 aa20.23■□□□□ 0.83
PCDHB17P-201ENST00000539533 AIDAQ96BJ3 306 aa20.23■□□□□ 0.83
PCDHB17P-201ENST00000539533 CRAMP1Q96RY5 1269 aa20.23■□□□□ 0.83
PCDHB17P-201ENST00000539533 NRXN2Q9P2S2 1712 aa20.22■□□□□ 0.83
PCDHB17P-201ENST00000539533 PRPF40AO75400 957 aaKnown RBP20.22■□□□□ 0.83
PCDHB17P-201ENST00000539533 HAND2P61296 217 aa20.22■□□□□ 0.83
PCDHB17P-201ENST00000539533 STRBPQ96SI9 672 aaKnown RBP20.22■□□□□ 0.83
PCDHB17P-201ENST00000539533 PDCL3Q9H2J4 239 aa20.22■□□□□ 0.83
PCDHB17P-201ENST00000539533 STK32BQ9NY57 414 aa20.22■□□□□ 0.83
PCDHB17P-201ENST00000539533 RAI14Q9P0K7 980 aa20.22■□□□□ 0.83
PCDHB17P-201ENST00000539533 E7EWF7 191 aa20.21■□□□□ 0.83
PCDHB17P-201ENST00000539533 GPT2Q8TD30 523 aa20.21■□□□□ 0.83
PCDHB17P-201ENST00000539533 RBSNQ9H1K0 784 aa20.21■□□□□ 0.83
PCDHB17P-201ENST00000539533 CTNNA3Q9UI47 895 aa20.21■□□□□ 0.83
PCDHB17P-201ENST00000539533 SEMA3EO15041 775 aa20.21■□□□□ 0.83
PCDHB17P-201ENST00000539533 MBD4O95243 580 aa20.21■□□□□ 0.83
PCDHB17P-201ENST00000539533 SRGNP10124 158 aa20.21■□□□□ 0.83
PCDHB17P-201ENST00000539533 ADGRA1Q86SQ6 560 aa20.21■□□□□ 0.83
PCDHB17P-201ENST00000539533 INTS4Q96HW7 963 aaKnown RBP20.21■□□□□ 0.83
PCDHB17P-201ENST00000539533 ARMT1Q9H993 441 aa20.21■□□□□ 0.83
PCDHB17P-201ENST00000539533 TPCN1Q9ULQ1 816 aa20.21■□□□□ 0.83
PCDHB17P-201ENST00000539533 JAG2Q9Y219 1238 aa20.21■□□□□ 0.83
PCDHB17P-201ENST00000539533 APPP05067 770 aa20.2■□□□□ 0.82
PCDHB17P-201ENST00000539533 MSNP26038 577 aaKnown RBP20.2■□□□□ 0.82
PCDHB17P-201ENST00000539533 CHAF1AQ13111 956 aaPredicted RBP20.2■□□□□ 0.82
PCDHB17P-201ENST00000539533 MIGA1Q8NAN2 632 aa20.2■□□□□ 0.82
PCDHB17P-201ENST00000539533 CYP7A1P22680 504 aa20.2■□□□□ 0.82
PCDHB17P-201ENST00000539533 SF3B2Q13435 895 aaKnown RBP20.2■□□□□ 0.82
PCDHB17P-201ENST00000539533 TOB2Q14106 344 aaPredicted RBP20.2■□□□□ 0.82
PCDHB17P-201ENST00000539533 IMMTQ16891 758 aaKnown RBP20.2■□□□□ 0.82
PCDHB17P-201ENST00000539533 UFL1O94874 794 aa20.19■□□□□ 0.82
PCDHB17P-201ENST00000539533 ME3Q16798 604 aa20.19■□□□□ 0.82
PCDHB17P-201ENST00000539533 HS1BP3Q53T59 392 aa20.19■□□□□ 0.82
PCDHB17P-201ENST00000539533 ALDH8A1Q9H2A2 487 aaPredicted RBP20.19■□□□□ 0.82
PCDHB17P-201ENST00000539533 BAG6P46379 1132 aa20.19■□□□□ 0.82
PCDHB17P-201ENST00000539533 LCORLQ8N3X6 602 aa20.19■□□□□ 0.82
PCDHB17P-201ENST00000539533 ZNF384Q8TF68 577 aa20.19■□□□□ 0.82
PCDHB17P-201ENST00000539533 LRRC2Q9BYS8 371 aa20.19■□□□□ 0.82
PCDHB17P-201ENST00000539533 PDGFDQ9GZP0 370 aaPredicted RBP20.19■□□□□ 0.82
PCDHB17P-201ENST00000539533 RBM27Q9P2N5 1060 aaKnown RBP20.19■□□□□ 0.82
PCDHB17P-201ENST00000539533 GGA1Q9UJY5 639 aa20.18■□□□□ 0.82
PCDHB17P-201ENST00000539533 LAMA4Q16363 1823 aa20.18■□□□□ 0.82
PCDHB17P-201ENST00000539533 PPEF1O14829 653 aaPredicted RBP20.17■□□□□ 0.82
PCDHB17P-201ENST00000539533 OFD1O75665 1012 aa20.17■□□□□ 0.82
PCDHB17P-201ENST00000539533 PDE6BP35913 854 aa20.17■□□□□ 0.82
PCDHB17P-201ENST00000539533 Q6ZUG5 572 aa20.17■□□□□ 0.82
PCDHB17P-201ENST00000539533 PDLIM2Q96JY6 352 aa20.17■□□□□ 0.82
PCDHB17P-201ENST00000539533 ZSCAN31Q96LW9 406 aaPredicted RBP20.17■□□□□ 0.82
PCDHB17P-201ENST00000539533 POLLQ9UGP5 575 aa20.17■□□□□ 0.82
PCDHB17P-201ENST00000539533 MYH13Q9UKX3 1938 aa20.17■□□□□ 0.82
PCDHB17P-201ENST00000539533 PATL2C9JE40 543 aaKnown RBP20.17■□□□□ 0.82
PCDHB17P-201ENST00000539533 ZNF213O14771 459 aa20.17■□□□□ 0.82
PCDHB17P-201ENST00000539533 PRKAB2O43741 272 aa20.17■□□□□ 0.82
PCDHB17P-201ENST00000539533 DTNBO60941 627 aa20.17■□□□□ 0.82
PCDHB17P-201ENST00000539533 NPR1P16066 1061 aa20.17■□□□□ 0.82
PCDHB17P-201ENST00000539533 ATP2B4P23634 1241 aa20.16■□□□□ 0.82
PCDHB17P-201ENST00000539533 ANKRD1Q15327 319 aa20.16■□□□□ 0.82
PCDHB17P-201ENST00000539533 OLFM4Q6UX06 510 aa20.16■□□□□ 0.82
PCDHB17P-201ENST00000539533 DHX32Q7L7V1 743 aaKnown RBP20.16■□□□□ 0.82
PCDHB17P-201ENST00000539533 CCDC83Q8IWF9 413 aa20.16■□□□□ 0.82
PCDHB17P-201ENST00000539533 NECAB1Q8N987 351 aa20.16■□□□□ 0.82
PCDHB17P-201ENST00000539533 PDS5AQ29RF7 1337 aaKnown RBP20.16■□□□□ 0.82
PCDHB17P-201ENST00000539533 HMGB1P09429 215 aaKnown RBP20.16■□□□□ 0.82
PCDHB17P-201ENST00000539533 ST3GAL1Q11201 340 aa20.16■□□□□ 0.82
PCDHB17P-201ENST00000539533 SP8Q8IXZ3 490 aa20.16■□□□□ 0.82
PCDHB17P-201ENST00000539533 TDRD7Q8NHU6 1098 aaKnown RBP20.16■□□□□ 0.82
PCDHB17P-201ENST00000539533 TBC1D16Q8TBP0 767 aa20.16■□□□□ 0.82
PCDHB17P-201ENST00000539533 EPB41L4AQ9HCS5 686 aaPredicted RBP20.16■□□□□ 0.82
PCDHB17P-201ENST00000539533 PODXL2Q9NZ53 605 aa20.16■□□□□ 0.82
PCDHB17P-201ENST00000539533 CACNA1SQ13698 1873 aa20.15■□□□□ 0.82
PCDHB17P-201ENST00000539533 PRDX5P30044 214 aa20.15■□□□□ 0.82
PCDHB17P-201ENST00000539533 C15orf52Q6ZUT6 534 aaKnown RBP20.15■□□□□ 0.82
PCDHB17P-201ENST00000539533 CHST3Q7LGC8 479 aa20.15■□□□□ 0.82
PCDHB17P-201ENST00000539533 IFNL3Q8IZI9 196 aa20.15■□□□□ 0.82
PCDHB17P-201ENST00000539533 CHAMP1Q96JM3 812 aa20.15■□□□□ 0.82
PCDHB17P-201ENST00000539533 NBPF3Q9H094 633 aa20.15■□□□□ 0.82
PCDHB17P-201ENST00000539533 SH2B1Q9NRF2 756 aaPredicted RBP20.15■□□□□ 0.82
PCDHB17P-201ENST00000539533 GSG1L2A8MUP6 293 aa20.15■□□□□ 0.82
PCDHB17P-201ENST00000539533 EXOSC10Q01780 885 aaKnown RBP20.15■□□□□ 0.82
PCDHB17P-201ENST00000539533 NAA16Q6N069 864 aaPredicted RBP20.15■□□□□ 0.82
PCDHB17P-201ENST00000539533 ZNF804AQ7Z570 1209 aa20.15■□□□□ 0.82
PCDHB17P-201ENST00000539533 NSUN4Q96CB9 384 aaKnown RBP20.15■□□□□ 0.82
PCDHB17P-201ENST00000539533 TMEM63CQ9P1W3 806 aa20.15■□□□□ 0.82
PCDHB17P-201ENST00000539533 ATP6V0A2Q9Y487 856 aa20.15■□□□□ 0.82
PCDHB17P-201ENST00000539533 SLC4A4Q9Y6R1 1079 aa20.15■□□□□ 0.82
PCDHB17P-201ENST00000539533 MECOMQ03112 1051 aa20.14■□□□□ 0.82
PCDHB17P-201ENST00000539533 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.14■□□□□ 0.82
PCDHB17P-201ENST00000539533 COL11A2P13942 1736 aaPredicted RBP20.14■□□□□ 0.81
PCDHB17P-201ENST00000539533 C6orf229H3BNL8 230 aa20.14■□□□□ 0.81
PCDHB17P-201ENST00000539533 ALDH1B1P30837 517 aa20.14■□□□□ 0.81
PCDHB17P-201ENST00000539533 LRSAM1Q6UWE0 723 aa20.14■□□□□ 0.81
PCDHB17P-201ENST00000539533 TMC4Q7Z404 712 aa20.14■□□□□ 0.81
PCDHB17P-201ENST00000539533 MASTLQ96GX5 879 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms