RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 H3BRJ5 948 aa4.2□□□□□ -1.74
CSDE1-216ENST00000534389 GNB5O14775 395 aa4.2□□□□□ -1.74
CSDE1-216ENST00000534389 ANP32CO43423 234 aa4.2□□□□□ -1.74
CSDE1-216ENST00000534389 C19orf57Q0VDD7 668 aa4.2□□□□□ -1.74
CSDE1-216ENST00000534389 RELL1Q8IUW5 271 aa4.2□□□□□ -1.74
CSDE1-216ENST00000534389 TTC9Q92623 222 aa4.2□□□□□ -1.74
CSDE1-216ENST00000534389 RNF34Q969K3 372 aa4.2□□□□□ -1.74
CSDE1-216ENST00000534389 ACSBG1Q96GR2 724 aa4.2□□□□□ -1.74
CSDE1-216ENST00000534389 CORO1BQ9BR76 489 aa4.2□□□□□ -1.74
CSDE1-216ENST00000534389 CARD10Q9BWT7 1032 aa4.2□□□□□ -1.74
CSDE1-216ENST00000534389 KRTAP17-1Q9BYP8 105 aa4.2□□□□□ -1.74
CSDE1-216ENST00000534389 SEC31BQ9NQW1 1179 aa4.2□□□□□ -1.74
CSDE1-216ENST00000534389 TMEM39AQ9NV64 488 aa4.2□□□□□ -1.74
CSDE1-216ENST00000534389 GGT7Q9UJ14 662 aa4.2□□□□□ -1.74
CSDE1-216ENST00000534389 PPM1HQ9ULR3 514 aa4.2□□□□□ -1.74
CSDE1-216ENST00000534389 STARD13Q9Y3M8 1113 aa4.2□□□□□ -1.74
CSDE1-216ENST00000534389 RNF123Q5XPI4 1314 aa4.2□□□□□ -1.74
CSDE1-216ENST00000534389 FSCN2O14926 492 aa4.19□□□□□ -1.74
CSDE1-216ENST00000534389 PPM1GO15355 546 aaPredicted RBP4.19□□□□□ -1.74
CSDE1-216ENST00000534389 CYP11A1P05108 521 aa4.19□□□□□ -1.74
CSDE1-216ENST00000534389 RLBP1P12271 317 aa4.19□□□□□ -1.74
CSDE1-216ENST00000534389 TCF3P15923 654 aa4.19□□□□□ -1.74
CSDE1-216ENST00000534389 EPHA1P21709 976 aa4.19□□□□□ -1.74
CSDE1-216ENST00000534389 SNRPNP63162 240 aaKnown RBP4.19□□□□□ -1.74
CSDE1-216ENST00000534389 PIP4K2BP78356 416 aa4.19□□□□□ -1.74
CSDE1-216ENST00000534389 PTPN12Q05209 780 aaKnown RBP4.19□□□□□ -1.74
CSDE1-216ENST00000534389 PWP1Q13610 501 aa4.19□□□□□ -1.74
CSDE1-216ENST00000534389 PDE3AQ14432 1141 aa4.19□□□□□ -1.74
CSDE1-216ENST00000534389 NFKBIBQ15653 356 aa4.19□□□□□ -1.74
CSDE1-216ENST00000534389 GLIPR1L2Q4G1C9 344 aa4.19□□□□□ -1.74
CSDE1-216ENST00000534389 RPS26P11Q5JNZ5 115 aaPredicted RBP4.19□□□□□ -1.74
CSDE1-216ENST00000534389 HP1BP3Q5SSJ5 553 aaPredicted RBP4.19□□□□□ -1.74
CSDE1-216ENST00000534389 MEI1Q5TIA1 1274 aa4.19□□□□□ -1.74
CSDE1-216ENST00000534389 MAP4K3Q8IVH8 894 aa4.19□□□□□ -1.74
CSDE1-216ENST00000534389 SCARF2Q96GP6 870 aaPredicted RBP4.19□□□□□ -1.74
CSDE1-216ENST00000534389 PLVAPQ9BX97 442 aa4.19□□□□□ -1.74
CSDE1-216ENST00000534389 EMILIN2Q9BXX0 1053 aa4.19□□□□□ -1.74
CSDE1-216ENST00000534389 ZNF576Q9H609 170 aa4.19□□□□□ -1.74
CSDE1-216ENST00000534389 PICK1Q9NRD5 415 aa4.19□□□□□ -1.74
CSDE1-216ENST00000534389 USP21Q9UK80 565 aa4.19□□□□□ -1.74
CSDE1-216ENST00000534389 RNF225M0QZC1 329 aaPredicted RBP4.18□□□□□ -1.74
CSDE1-216ENST00000534389 NFKBIEO00221 500 aa4.18□□□□□ -1.74
CSDE1-216ENST00000534389 RRP9O43818 475 aaKnown RBP4.18□□□□□ -1.74
CSDE1-216ENST00000534389 APBA3O96018 575 aa4.18□□□□□ -1.74
CSDE1-216ENST00000534389 HOXB4P17483 251 aaPredicted RBP4.18□□□□□ -1.74
CSDE1-216ENST00000534389 ERCC5P28715 1186 aaPredicted RBP4.18□□□□□ -1.74
CSDE1-216ENST00000534389 GBP2P32456 591 aaPredicted RBP4.18□□□□□ -1.74
CSDE1-216ENST00000534389 DGKGP49619 791 aa4.18□□□□□ -1.74
CSDE1-216ENST00000534389 NLRP12P59046 1061 aa4.18□□□□□ -1.74
CSDE1-216ENST00000534389 LRRC14Q15048 493 aa4.18□□□□□ -1.74
CSDE1-216ENST00000534389 DUOXA2Q1HG44 320 aa4.18□□□□□ -1.74
CSDE1-216ENST00000534389 KLHL23Q8NBE8 558 aa4.18□□□□□ -1.74
CSDE1-216ENST00000534389 KCNB2Q92953 911 aa4.18□□□□□ -1.74
CSDE1-216ENST00000534389 KRTAP4-8Q9BYQ9 185 aa4.18□□□□□ -1.74
CSDE1-216ENST00000534389 ADAM19Q9H013 955 aa4.18□□□□□ -1.74
CSDE1-216ENST00000534389 SRA1Q9HD15 236 aaKnown RBP4.18□□□□□ -1.74
CSDE1-216ENST00000534389 RAD18Q9NS91 495 aa4.18□□□□□ -1.74
CSDE1-216ENST00000534389 KIAA1522Q9P206 1035 aaPredicted RBP4.18□□□□□ -1.74
CSDE1-216ENST00000534389 SOX13Q9UN79 622 aa4.18□□□□□ -1.74
CSDE1-216ENST00000534389 VPS8Q8N3P4 1428 aa4.18□□□□□ -1.74
CSDE1-216ENST00000534389 CNTNAP5Q8WYK1 1306 aa4.18□□□□□ -1.74
CSDE1-216ENST00000534389 MINDY4BA8MYZ0 360 aa4.17□□□□□ -1.74
CSDE1-216ENST00000534389 F6X3S4 739 aa4.17□□□□□ -1.74
CSDE1-216ENST00000534389 FAM229AH3BQW9 127 aa4.17□□□□□ -1.74
CSDE1-216ENST00000534389 ESRRAP11474 423 aaPredicted RBP4.17□□□□□ -1.74
CSDE1-216ENST00000534389 ITPKAP23677 461 aa4.17□□□□□ -1.74
CSDE1-216ENST00000534389 VAMP1P23763 118 aa4.17□□□□□ -1.74
CSDE1-216ENST00000534389 ST13P50502 369 aaKnown RBP4.17□□□□□ -1.74
CSDE1-216ENST00000534389 AP3B2Q13367 1082 aa4.17□□□□□ -1.74
CSDE1-216ENST00000534389 MRPL58Q14197 206 aaKnown RBP4.17□□□□□ -1.74
CSDE1-216ENST00000534389 HSP90AA2PQ14568 343 aaPredicted RBP4.17□□□□□ -1.74
CSDE1-216ENST00000534389 POU4F3Q15319 338 aa4.17□□□□□ -1.74
CSDE1-216ENST00000534389 C9orf131Q5VYM1 1079 aa4.17□□□□□ -1.74
CSDE1-216ENST00000534389 C20orf204Q6ZNR8 217 aa4.17□□□□□ -1.74
CSDE1-216ENST00000534389 SV2BQ7L1I2 683 aa4.17□□□□□ -1.74
CSDE1-216ENST00000534389 SULF2Q8IWU5 870 aa4.17□□□□□ -1.74
CSDE1-216ENST00000534389 GLIS3Q8NEA6 775 aa4.17□□□□□ -1.74
CSDE1-216ENST00000534389 WNT8BQ93098 351 aa4.17□□□□□ -1.74
CSDE1-216ENST00000534389 ZC3H12CQ9C0D7 883 aaKnown RBP4.17□□□□□ -1.74
CSDE1-216ENST00000534389 CCSER2Q9H7U1 834 aa4.17□□□□□ -1.74
CSDE1-216ENST00000534389 OSGEPQ9NPF4 335 aa4.17□□□□□ -1.74
CSDE1-216ENST00000534389 PRDM6Q9NQX0 595 aa4.17□□□□□ -1.74
CSDE1-216ENST00000534389 PEG3Q9GZU2 1588 aa4.16□□□□□ -1.74
CSDE1-216ENST00000534389 AKNAQ7Z591 1439 aa4.16□□□□□ -1.74
CSDE1-216ENST00000534389 A0A0A0MRY4 1105 aa4.16□□□□□ -1.74
CSDE1-216ENST00000534389 KRTAP9-6A0A140TA67 174 aa4.16□□□□□ -1.74
CSDE1-216ENST00000534389 SOX1O00570 391 aaPredicted RBP4.16□□□□□ -1.74
CSDE1-216ENST00000534389 BPNT1O95861 308 aa4.16□□□□□ -1.74
CSDE1-216ENST00000534389 RECKO95980 971 aa4.16□□□□□ -1.74
CSDE1-216ENST00000534389 B3GALT4O96024 378 aa4.16□□□□□ -1.74
CSDE1-216ENST00000534389 CELA3AP09093 270 aa4.16□□□□□ -1.74
CSDE1-216ENST00000534389 CTSHP09668 335 aa4.16□□□□□ -1.74
CSDE1-216ENST00000534389 CD68P34810 354 aaPredicted RBP4.16□□□□□ -1.74
CSDE1-216ENST00000534389 RGS3P49796 1198 aa4.16□□□□□ -1.74
CSDE1-216ENST00000534389 GNL2Q13823 731 aaKnown RBP4.16□□□□□ -1.74
CSDE1-216ENST00000534389 PCNX4Q63HM2 1172 aa4.16□□□□□ -1.74
CSDE1-216ENST00000534389 MAP1SQ66K74 1059 aaPredicted RBP4.16□□□□□ -1.74
CSDE1-216ENST00000534389 TTBK2Q6IQ55 1244 aa4.16□□□□□ -1.74
CSDE1-216ENST00000534389 VN1R5Q7Z5H4 357 aa4.16□□□□□ -1.74
CSDE1-216ENST00000534389 USP48Q86UV5 1035 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms