RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 NBPF7P0C2Y1 421 aaPredicted RBP26.92■■□□□ 1.9
SSH3-211ENST00000534112 CRKP46108 304 aa26.92■■□□□ 1.9
SSH3-211ENST00000534112 SP3Q02447 781 aa26.92■■□□□ 1.9
SSH3-211ENST00000534112 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.92■■□□□ 1.9
SSH3-211ENST00000534112 MS4A4AQ96JQ5 239 aa26.92■■□□□ 1.9
SSH3-211ENST00000534112 TMEM39BQ9GZU3 492 aa26.92■■□□□ 1.9
SSH3-211ENST00000534112 EFCC1Q9HA90 598 aa26.92■■□□□ 1.9
SSH3-211ENST00000534112 ECM29Q5VYK3 1845 aa26.91■■□□□ 1.9
SSH3-211ENST00000534112 FBXO33Q7Z6M2 555 aa26.91■■□□□ 1.9
SSH3-211ENST00000534112 MROH5Q6ZUA9 1318 aa26.9■■□□□ 1.9
SSH3-211ENST00000534112 ANP32CO43423 234 aa26.9■■□□□ 1.9
SSH3-211ENST00000534112 MAP3K9P80192 1104 aa26.9■■□□□ 1.9
SSH3-211ENST00000534112 GRIK5Q16478 980 aa26.9■■□□□ 1.9
SSH3-211ENST00000534112 VPS37DQ86XT2 251 aa26.9■■□□□ 1.9
SSH3-211ENST00000534112 CNKSR2Q8WXI2 1034 aa26.9■■□□□ 1.9
SSH3-211ENST00000534112 TNNI2P48788 182 aa26.89■■□□□ 1.9
SSH3-211ENST00000534112 CAP1Q01518 475 aa26.89■■□□□ 1.9
SSH3-211ENST00000534112 IQSEC3Q9UPP2 1182 aaPredicted RBP26.89■■□□□ 1.9
SSH3-211ENST00000534112 UTYO14607 1347 aa26.89■■□□□ 1.89
SSH3-211ENST00000534112 VGLL4Q14135 290 aa26.88■■□□□ 1.89
SSH3-211ENST00000534112 BRI3BPQ8WY22 251 aa26.88■■□□□ 1.89
SSH3-211ENST00000534112 ARMC5Q96C12 935 aa26.88■■□□□ 1.89
SSH3-211ENST00000534112 BICC1Q9H694 974 aaKnown RBP26.88■■□□□ 1.89
SSH3-211ENST00000534112 CHAF1AQ13111 956 aaPredicted RBP26.87■■□□□ 1.89
SSH3-211ENST00000534112 RABL6Q3YEC7 729 aaPredicted RBP26.87■■□□□ 1.89
SSH3-211ENST00000534112 LRRC24Q50LG9 513 aa26.87■■□□□ 1.89
SSH3-211ENST00000534112 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.87■■□□□ 1.89
SSH3-211ENST00000534112 GTF2A2P52657 109 aa26.86■■□□□ 1.89
SSH3-211ENST00000534112 HDLBPQ00341 1268 aaKnown RBP26.86■■□□□ 1.89
SSH3-211ENST00000534112 METTL24Q5JXM2 366 aa26.86■■□□□ 1.89
SSH3-211ENST00000534112 TBC1D22AQ8WUA7 517 aa26.86■■□□□ 1.89
SSH3-211ENST00000534112 CSADQ9Y600 493 aa26.86■■□□□ 1.89
SSH3-211ENST00000534112 KIAA0100Q14667 2235 aaKnown RBP26.85■■□□□ 1.89
SSH3-211ENST00000534112 BRCA2P51587 3418 aa26.85■■□□□ 1.89
SSH3-211ENST00000534112 CCL15-CCL14A0A0B4J2E2 113 aa26.85■■□□□ 1.89
SSH3-211ENST00000534112 FRAT2O75474 233 aaPredicted RBP26.85■■□□□ 1.89
SSH3-211ENST00000534112 CCL15Q16663 113 aa26.85■■□□□ 1.89
SSH3-211ENST00000534112 CAVIN4Q5BKX8 364 aa26.85■■□□□ 1.89
SSH3-211ENST00000534112 ZFYVE28Q9HCC9 887 aa26.85■■□□□ 1.89
SSH3-211ENST00000534112 LAMB1P07942 1786 aa26.84■■□□□ 1.89
SSH3-211ENST00000534112 TAF1CQ15572 869 aaPredicted RBP26.84■■□□□ 1.89
SSH3-211ENST00000534112 ANKRD44Q8N8A2 993 aa26.84■■□□□ 1.89
SSH3-211ENST00000534112 TEKT1Q969V4 418 aa26.84■■□□□ 1.89
SSH3-211ENST00000534112 GCC1Q96CN9 775 aa26.84■■□□□ 1.89
SSH3-211ENST00000534112 OTUD5Q96G74 571 aa26.84■■□□□ 1.89
SSH3-211ENST00000534112 PDE8BO95263 885 aa26.83■■□□□ 1.89
SSH3-211ENST00000534112 CACNB3P54284 484 aa26.83■■□□□ 1.89
SSH3-211ENST00000534112 VGLL2Q8N8G2 317 aa26.83■■□□□ 1.89
SSH3-211ENST00000534112 MRIQ9BWK5 157 aa26.83■■□□□ 1.89
SSH3-211ENST00000534112 EN2P19622 333 aaPredicted RBP26.82■■□□□ 1.88
SSH3-211ENST00000534112 BCAMP50895 628 aa26.82■■□□□ 1.88
SSH3-211ENST00000534112 FAM9BQ8IZU0 186 aa26.82■■□□□ 1.88
SSH3-211ENST00000534112 FAM43AQ8N2R8 423 aa26.82■■□□□ 1.88
SSH3-211ENST00000534112 ZDHHC15Q96MV8 337 aa26.82■■□□□ 1.88
SSH3-211ENST00000534112 ARHGEF6Q15052 776 aa26.81■■□□□ 1.88
SSH3-211ENST00000534112 SPDYE5A6NIY4 337 aa26.8■■□□□ 1.88
SSH3-211ENST00000534112 APOBEC3HQ6NTF7 200 aaKnown RBP26.8■■□□□ 1.88
SSH3-211ENST00000534112 MRPL50Q8N5N7 158 aaKnown RBP26.8■■□□□ 1.88
SSH3-211ENST00000534112 KLHDC4Q8TBB5 520 aa26.8■■□□□ 1.88
SSH3-211ENST00000534112 OTOFQ9HC10 1997 aa26.79■■□□□ 1.88
SSH3-211ENST00000534112 FAM83AQ86UY5 434 aa26.79■■□□□ 1.88
SSH3-211ENST00000534112 ZNF333Q96JL9 665 aa26.79■■□□□ 1.88
SSH3-211ENST00000534112 TMOD2Q9NZR1 351 aa26.79■■□□□ 1.88
SSH3-211ENST00000534112 SNCAIPQ9Y6H5 919 aa26.79■■□□□ 1.88
SSH3-211ENST00000534112 FKBP1CQ5VVH2 108 aa26.78■■□□□ 1.88
SSH3-211ENST00000534112 ERO1BQ86YB8 467 aa26.78■■□□□ 1.88
SSH3-211ENST00000534112 WRNIP1Q96S55 665 aa26.78■■□□□ 1.88
SSH3-211ENST00000534112 TMEM106CQ9BVX2 250 aa26.78■■□□□ 1.88
SSH3-211ENST00000534112 SUGT1Q9Y2Z0 365 aa26.78■■□□□ 1.88
SSH3-211ENST00000534112 PTCH2Q9Y6C5 1203 aa26.78■■□□□ 1.88
SSH3-211ENST00000534112 CETPP11597 493 aa26.77■■□□□ 1.88
SSH3-211ENST00000534112 NBPF11Q86T75 865 aa26.77■■□□□ 1.88
SSH3-211ENST00000534112 ZKSCAN4Q969J2 545 aaPredicted RBP26.77■■□□□ 1.88
SSH3-211ENST00000534112 ZNF521Q96K83 1311 aa26.76■■□□□ 1.87
SSH3-211ENST00000534112 WDHD1O75717 1129 aaPredicted RBP26.76■■□□□ 1.87
SSH3-211ENST00000534112 IFIT1P09914 478 aaKnown RBP26.76■■□□□ 1.87
SSH3-211ENST00000534112 FGFR2P21802 821 aa26.76■■□□□ 1.87
SSH3-211ENST00000534112 PUM3Q15397 648 aaKnown RBP26.76■■□□□ 1.87
SSH3-211ENST00000534112 SLC9C1Q4G0N8 1177 aa26.76■■□□□ 1.87
SSH3-211ENST00000534112 HOOK2Q96ED9 719 aa26.76■■□□□ 1.87
SSH3-211ENST00000534112 USP44Q9H0E7 712 aa26.76■■□□□ 1.87
SSH3-211ENST00000534112 MAST3O60307 1309 aa26.75■■□□□ 1.87
SSH3-211ENST00000534112 PTPRCP08575 1304 aa26.75■■□□□ 1.87
SSH3-211ENST00000534112 KIF16BQ96L93 1317 aa26.75■■□□□ 1.87
SSH3-211ENST00000534112 BTBD19C9JJ37 291 aa26.75■■□□□ 1.87
SSH3-211ENST00000534112 IRF6O14896 467 aa26.75■■□□□ 1.87
SSH3-211ENST00000534112 TLR2O60603 784 aa26.75■■□□□ 1.87
SSH3-211ENST00000534112 SNAPC2Q13487 334 aa26.75■■□□□ 1.87
SSH3-211ENST00000534112 HABP4Q5JVS0 413 aaKnown RBP26.75■■□□□ 1.87
SSH3-211ENST00000534112 HHIPL2Q6UWX4 724 aa26.75■■□□□ 1.87
SSH3-211ENST00000534112 ZCCHC17Q9NP64 241 aaKnown RBP26.75■■□□□ 1.87
SSH3-211ENST00000534112 ARAP2Q8WZ64 1704 aa26.74■■□□□ 1.87
SSH3-211ENST00000534112 PPIL2Q13356 520 aa26.73■■□□□ 1.87
SSH3-211ENST00000534112 DCAF15Q66K64 600 aa26.73■■□□□ 1.87
SSH3-211ENST00000534112 MIGA2Q7L4E1 593 aa26.72■■□□□ 1.87
SSH3-211ENST00000534112 ARHGAP39Q9C0H5 1083 aa26.72■■□□□ 1.87
SSH3-211ENST00000534112 LACTBP83111 547 aaPredicted RBP26.71■■□□□ 1.87
SSH3-211ENST00000534112 KIF22Q14807 665 aa26.71■■□□□ 1.87
SSH3-211ENST00000534112 SLC4A8Q2Y0W8 1093 aa26.71■■□□□ 1.87
SSH3-211ENST00000534112 SSH1Q8WYL5 1049 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms