RNA–Protein interactions for RNA: ENST00000534010.1

SDHD-208, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 2

Gene SDHD, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-208ENST00000534010 SEMA3EO15041 775 aa13.47□□□□□ -0.25
SDHD-208ENST00000534010 SRGAP3O43295 1099 aa13.47□□□□□ -0.25
SDHD-208ENST00000534010 CRKP46108 304 aa13.47□□□□□ -0.25
SDHD-208ENST00000534010 LBX1P52954 281 aa13.47□□□□□ -0.25
SDHD-208ENST00000534010 FKBP1CQ5VVH2 108 aa13.47□□□□□ -0.25
SDHD-208ENST00000534010 HHIPL2Q6UWX4 724 aa13.47□□□□□ -0.25
SDHD-208ENST00000534010 FRAT1Q92837 279 aaPredicted RBP13.47□□□□□ -0.25
SDHD-208ENST00000534010 CLUAP1Q96AJ1 413 aa13.47□□□□□ -0.25
SDHD-208ENST00000534010 CSRNP1Q96S65 589 aa13.47□□□□□ -0.25
SDHD-208ENST00000534010 SIL1Q9H173 461 aa13.47□□□□□ -0.25
SDHD-208ENST00000534010 SAGE1Q9NXZ1 904 aa13.47□□□□□ -0.25
SDHD-208ENST00000534010 ZNF70Q9UC06 446 aaPredicted RBP13.47□□□□□ -0.25
SDHD-208ENST00000534010 IQSEC3Q9UPP2 1182 aaPredicted RBP13.47□□□□□ -0.25
SDHD-208ENST00000534010 RFX7Q2KHR2 1363 aa13.46□□□□□ -0.25
SDHD-208ENST00000534010 RPAP1Q9BWH6 1393 aaPredicted RBP13.46□□□□□ -0.25
SDHD-208ENST00000534010 F8W031 263 aaPredicted RBP13.46□□□□□ -0.25
SDHD-208ENST00000534010 PHKA1P46020 1223 aa13.46□□□□□ -0.25
SDHD-208ENST00000534010 ZNF157P51786 506 aaPredicted RBP13.46□□□□□ -0.25
SDHD-208ENST00000534010 KIF23Q02241 960 aaPredicted RBP13.46□□□□□ -0.25
SDHD-208ENST00000534010 WDR66Q8TBY9 1149 aa13.46□□□□□ -0.25
SDHD-208ENST00000534010 AIDAQ96BJ3 306 aa13.46□□□□□ -0.25
SDHD-208ENST00000534010 NOP58Q9Y2X3 529 aaKnown RBP13.46□□□□□ -0.25
SDHD-208ENST00000534010 CLRN2A0PK11 232 aa13.45□□□□□ -0.26
SDHD-208ENST00000534010 UBE2Q2LH0YL09 131 aa13.45□□□□□ -0.26
SDHD-208ENST00000534010 ADORA1P30542 326 aa13.45□□□□□ -0.26
SDHD-208ENST00000534010 ATP8B2P98198 1209 aa13.45□□□□□ -0.26
SDHD-208ENST00000534010 CCDC102BQ68D86 513 aa13.45□□□□□ -0.26
SDHD-208ENST00000534010 VPS37DQ86XT2 251 aa13.45□□□□□ -0.26
SDHD-208ENST00000534010 REM2Q8IYK8 340 aaPredicted RBP13.45□□□□□ -0.26
SDHD-208ENST00000534010 CFHR5Q9BXR6 569 aa13.45□□□□□ -0.26
SDHD-208ENST00000534010 USP2O75604 605 aaPredicted RBP13.44□□□□□ -0.26
SDHD-208ENST00000534010 TM4SF4P48230 202 aa13.44□□□□□ -0.26
SDHD-208ENST00000534010 TIMM10P62072 90 aa13.44□□□□□ -0.26
SDHD-208ENST00000534010 TFCP2Q12800 502 aa13.44□□□□□ -0.26
SDHD-208ENST00000534010 RASA3Q14644 834 aa13.44□□□□□ -0.26
SDHD-208ENST00000534010 NBPF12Q5TAG4 269 aaPredicted RBP13.44□□□□□ -0.26
SDHD-208ENST00000534010 PAXIP1Q6ZW49 1069 aaPredicted RBP13.44□□□□□ -0.26
SDHD-208ENST00000534010 FAM83AQ86UY5 434 aa13.44□□□□□ -0.26
SDHD-208ENST00000534010 CDAN1Q8IWY9 1227 aa13.44□□□□□ -0.26
SDHD-208ENST00000534010 TDRD3Q9H7E2 651 aaKnown RBP13.44□□□□□ -0.26
SDHD-208ENST00000534010 GPR108Q9NPR9 543 aa13.44□□□□□ -0.26
SDHD-208ENST00000534010 MYO5AQ9Y4I1 1855 aaKnown RBP13.44□□□□□ -0.26
SDHD-208ENST00000534010 CENPFP49454 3210 aa13.43□□□□□ -0.26
SDHD-208ENST00000534010 GAKO14976 1311 aa13.43□□□□□ -0.26
SDHD-208ENST00000534010 MAST3O60307 1309 aa13.43□□□□□ -0.26
SDHD-208ENST00000534010 A0A1B0GUL7 405 aa13.43□□□□□ -0.26
SDHD-208ENST00000534010 MYO1BO43795 1136 aa13.43□□□□□ -0.26
SDHD-208ENST00000534010 ARID4AP29374 1257 aaPredicted RBP13.43□□□□□ -0.26
SDHD-208ENST00000534010 PRDX5P30044 214 aa13.43□□□□□ -0.26
SDHD-208ENST00000534010 CHAF1AQ13111 956 aaPredicted RBP13.43□□□□□ -0.26
SDHD-208ENST00000534010 TNFAIP1Q13829 316 aa13.43□□□□□ -0.26
SDHD-208ENST00000534010 RASGRF1Q13972 1273 aa13.43□□□□□ -0.26
SDHD-208ENST00000534010 ZNF384Q8TF68 577 aa13.43□□□□□ -0.26
SDHD-208ENST00000534010 TEKT1Q969V4 418 aa13.43□□□□□ -0.26
SDHD-208ENST00000534010 FAM163AQ96GL9 167 aaPredicted RBP13.43□□□□□ -0.26
SDHD-208ENST00000534010 DENND2AQ9ULE3 1009 aa13.43□□□□□ -0.26
SDHD-208ENST00000534010 NF2P35240 595 aa13.42□□□□□ -0.26
SDHD-208ENST00000534010 NOM1Q5C9Z4 860 aaKnown RBP13.42□□□□□ -0.26
SDHD-208ENST00000534010 SPRYD7Q5W111 196 aa13.42□□□□□ -0.26
SDHD-208ENST00000534010 TNS4Q8IZW8 715 aa13.42□□□□□ -0.26
SDHD-208ENST00000534010 XAGE2Q96GT9 111 aa13.42□□□□□ -0.26
SDHD-208ENST00000534010 RNF186Q9NXI6 227 aa13.42□□□□□ -0.26
SDHD-208ENST00000534010 FZD1Q9UP38 647 aa13.42□□□□□ -0.26
SDHD-208ENST00000534010 AKAP2Q9Y2D5 859 aa13.42□□□□□ -0.26
SDHD-208ENST00000534010 DAGLAQ9Y4D2 1042 aa13.42□□□□□ -0.26
SDHD-208ENST00000534010 ATRNL1Q5VV63 1379 aa13.42□□□□□ -0.26
SDHD-208ENST00000534010 MAST2Q6P0Q8 1798 aa13.41□□□□□ -0.26
SDHD-208ENST00000534010 GRM1Q13255 1194 aa13.41□□□□□ -0.26
SDHD-208ENST00000534010 SUPT20HL1Q3ZLR7 823 aa13.41□□□□□ -0.26
SDHD-208ENST00000534010 CEP85Q6P2H3 762 aa13.41□□□□□ -0.26
SDHD-208ENST00000534010 ARMC9Q7Z3E5 817 aa13.41□□□□□ -0.26
SDHD-208ENST00000534010 CDK5RAP2Q96SN8 1893 aa13.41□□□□□ -0.26
SDHD-208ENST00000534010 DOCK2Q92608 1830 aa13.41□□□□□ -0.26
SDHD-208ENST00000534010 TESPA1A2RU30 521 aaPredicted RBP13.4□□□□□ -0.26
SDHD-208ENST00000534010 ZBTB48P10074 688 aaPredicted RBP13.4□□□□□ -0.26
SDHD-208ENST00000534010 GJA5P36382 358 aa13.4□□□□□ -0.26
SDHD-208ENST00000534010 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.4□□□□□ -0.26
SDHD-208ENST00000534010 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.4□□□□□ -0.26
SDHD-208ENST00000534010 CLMNQ96JQ2 1002 aa13.4□□□□□ -0.26
SDHD-208ENST00000534010 ZNF512BQ96KM6 892 aaPredicted RBP13.4□□□□□ -0.26
SDHD-208ENST00000534010 TMEM39BQ9GZU3 492 aa13.4□□□□□ -0.26
SDHD-208ENST00000534010 VEZTQ9HBM0 779 aa13.4□□□□□ -0.26
SDHD-208ENST00000534010 GNL3LQ9NVN8 582 aaKnown RBP13.4□□□□□ -0.26
SDHD-208ENST00000534010 ANGEL1Q9UNK9 670 aaKnown RBP13.4□□□□□ -0.26
SDHD-208ENST00000534010 FOCADQ5VW36 1801 aa13.4□□□□□ -0.26
SDHD-208ENST00000534010 TNRC18O15417 2968 aaPredicted RBP13.4□□□□□ -0.26
SDHD-208ENST00000534010 BRCA2P51587 3418 aa13.39□□□□□ -0.27
SDHD-208ENST00000534010 PPP1R12BO60237 982 aaPredicted RBP13.39□□□□□ -0.27
SDHD-208ENST00000534010 FRAT2O75474 233 aaPredicted RBP13.39□□□□□ -0.27
SDHD-208ENST00000534010 RBM5P52756 815 aaKnown RBP eCLIP13.39□□□□□ -0.27
SDHD-208ENST00000534010 MAP3K10Q02779 954 aa13.39□□□□□ -0.27
SDHD-208ENST00000534010 MVPQ14764 893 aaKnown RBP13.39□□□□□ -0.27
SDHD-208ENST00000534010 DIXDC1Q155Q3 683 aa13.39□□□□□ -0.27
SDHD-208ENST00000534010 CDC42EP5Q6NZY7 148 aa13.39□□□□□ -0.27
SDHD-208ENST00000534010 PANK1Q8TE04 598 aa13.39□□□□□ -0.27
SDHD-208ENST00000534010 BEGAINQ9BUH8 593 aa13.39□□□□□ -0.27
SDHD-208ENST00000534010 IDI2Q9BXS1 227 aa13.39□□□□□ -0.27
SDHD-208ENST00000534010 ZBTB40Q9NUA8 1239 aa13.39□□□□□ -0.27
SDHD-208ENST00000534010 HMG20BQ9P0W2 317 aa13.39□□□□□ -0.27
SDHD-208ENST00000534010 FAM198AQ9UFP1 575 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms