RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 CACNB3P54284 484 aa16.52■□□□□ 0.24
COPB1-209ENST00000533096 CHAF1AQ13111 956 aaPredicted RBP16.52■□□□□ 0.24
COPB1-209ENST00000533096 CCDC27Q2M243 656 aa16.52■□□□□ 0.24
COPB1-209ENST00000533096 VPS37DQ86XT2 251 aa16.52■□□□□ 0.24
COPB1-209ENST00000533096 FAM43AQ8N2R8 423 aa16.52■□□□□ 0.24
COPB1-209ENST00000533096 TDRD7Q8NHU6 1098 aaKnown RBP16.52■□□□□ 0.24
COPB1-209ENST00000533096 FAM84BQ96KN1 310 aaPredicted RBP16.52■□□□□ 0.24
COPB1-209ENST00000533096 PUS3Q9BZE2 481 aaKnown RBP16.52■□□□□ 0.24
COPB1-209ENST00000533096 CSADQ9Y600 493 aa16.52■□□□□ 0.24
COPB1-209ENST00000533096 TNNI2P48788 182 aa16.51■□□□□ 0.23
COPB1-209ENST00000533096 VGLL4Q14135 290 aa16.51■□□□□ 0.23
COPB1-209ENST00000533096 SH3TC2Q8TF17 1288 aa16.51■□□□□ 0.23
COPB1-209ENST00000533096 SERPINA10Q9UK55 444 aa16.51■□□□□ 0.23
COPB1-209ENST00000533096 FAM205AQ6ZU69 1335 aa16.5■□□□□ 0.23
COPB1-209ENST00000533096 COL1A1P02452 1464 aaPredicted RBP16.5■□□□□ 0.23
COPB1-209ENST00000533096 GRM8O00222 908 aa16.5■□□□□ 0.23
COPB1-209ENST00000533096 WDHD1O75717 1129 aaPredicted RBP16.5■□□□□ 0.23
COPB1-209ENST00000533096 GRIK5Q16478 980 aa16.5■□□□□ 0.23
COPB1-209ENST00000533096 ZNF333Q96JL9 665 aa16.5■□□□□ 0.23
COPB1-209ENST00000533096 TEPSINQ96N21 525 aa16.5■□□□□ 0.23
COPB1-209ENST00000533096 COLQQ9Y215 455 aaPredicted RBP16.5■□□□□ 0.23
COPB1-209ENST00000533096 FANCIQ9NVI1 1328 aa16.49■□□□□ 0.23
COPB1-209ENST00000533096 UBE4AQ14139 1066 aa16.49■□□□□ 0.23
COPB1-209ENST00000533096 KIF22Q14807 665 aa16.49■□□□□ 0.23
COPB1-209ENST00000533096 ZKSCAN4Q969J2 545 aaPredicted RBP16.49■□□□□ 0.23
COPB1-209ENST00000533096 ARHGAP39Q9C0H5 1083 aa16.49■□□□□ 0.23
COPB1-209ENST00000533096 IL16Q14005 1332 aa16.48■□□□□ 0.23
COPB1-209ENST00000533096 H0YGN5 161 aa16.47■□□□□ 0.23
COPB1-209ENST00000533096 FXR1P51114 621 aaKnown RBP eCLIP16.47■□□□□ 0.234e-8■■■■■ 57
COPB1-209ENST00000533096 MIGA2Q7L4E1 593 aa16.47■□□□□ 0.23
COPB1-209ENST00000533096 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.47■□□□□ 0.23
COPB1-209ENST00000533096 CETPP11597 493 aa16.46■□□□□ 0.23
COPB1-209ENST00000533096 CAVIN4Q5BKX8 364 aa16.46■□□□□ 0.23
COPB1-209ENST00000533096 DPF3Q92784 378 aa16.46■□□□□ 0.23
COPB1-209ENST00000533096 SUCLG2Q96I99 432 aa16.46■□□□□ 0.23
COPB1-209ENST00000533096 WRNIP1Q96S55 665 aa16.46■□□□□ 0.23
COPB1-209ENST00000533096 BTBD19C9JJ37 291 aa16.45■□□□□ 0.22
COPB1-209ENST00000533096 METTL24Q5JXM2 366 aa16.45■□□□□ 0.22
COPB1-209ENST00000533096 FBXO33Q7Z6M2 555 aa16.45■□□□□ 0.22
COPB1-209ENST00000533096 WDR63Q8IWG1 891 aa16.45■□□□□ 0.22
COPB1-209ENST00000533096 TEKT1Q969V4 418 aa16.45■□□□□ 0.22
COPB1-209ENST00000533096 SRCIN1Q9C0H9 1055 aa16.45■□□□□ 0.22
COPB1-209ENST00000533096 TMOD2Q9NZR1 351 aa16.45■□□□□ 0.22
COPB1-209ENST00000533096 RIPOR2Q9Y4F9 1068 aa16.45■□□□□ 0.22
COPB1-209ENST00000533096 PSME4Q14997 1843 aa16.45■□□□□ 0.22
COPB1-209ENST00000533096 SPDYE5A6NIY4 337 aa16.44■□□□□ 0.22
COPB1-209ENST00000533096 IRF6O14896 467 aa16.44■□□□□ 0.22
COPB1-209ENST00000533096 TLR2O60603 784 aa16.44■□□□□ 0.22
COPB1-209ENST00000533096 BCAMP50895 628 aa16.44■□□□□ 0.22
COPB1-209ENST00000533096 SNAPC2Q13487 334 aa16.44■□□□□ 0.22
COPB1-209ENST00000533096 LRRC24Q50LG9 513 aa16.44■□□□□ 0.22
COPB1-209ENST00000533096 ERO1BQ86YB8 467 aa16.44■□□□□ 0.22
COPB1-209ENST00000533096 MRS2Q9HD23 443 aa16.44■□□□□ 0.22
COPB1-209ENST00000533096 SPINK5Q9NQ38 1064 aaPredicted RBP16.44■□□□□ 0.22
COPB1-209ENST00000533096 CPA4Q9UI42 421 aa16.44■□□□□ 0.22
COPB1-209ENST00000533096 ALDH1L1O75891 902 aa16.43■□□□□ 0.22
COPB1-209ENST00000533096 FMNL1O95466 1100 aaPredicted RBP16.43■□□□□ 0.22
COPB1-209ENST00000533096 NBPF7P0C2Y1 421 aaPredicted RBP16.43■□□□□ 0.22
COPB1-209ENST00000533096 LACTBP83111 547 aaPredicted RBP16.43■□□□□ 0.22
COPB1-209ENST00000533096 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.43■□□□□ 0.22
COPB1-209ENST00000533096 BIN2Q9UBW5 565 aaPredicted RBP16.43■□□□□ 0.22
COPB1-209ENST00000533096 SNCAIPQ9Y6H5 919 aa16.43■□□□□ 0.22
COPB1-209ENST00000533096 MROH5Q6ZUA9 1318 aa16.43■□□□□ 0.22
COPB1-209ENST00000533096 SPEF2Q9C093 1822 aa16.42■□□□□ 0.22
COPB1-209ENST00000533096 PSMC4P43686 418 aa16.42■□□□□ 0.22
COPB1-209ENST00000533096 MTFR1Q15390 333 aa16.42■□□□□ 0.22
COPB1-209ENST00000533096 KLHDC4Q8TBB5 520 aa16.42■□□□□ 0.22
COPB1-209ENST00000533096 TBC1D22AQ8WUA7 517 aa16.42■□□□□ 0.22
COPB1-209ENST00000533096 KAZALD1Q96I82 304 aa16.42■□□□□ 0.22
COPB1-209ENST00000533096 HDLBPQ00341 1268 aaKnown RBP16.41■□□□□ 0.22
COPB1-209ENST00000533096 TCP10Q12799 353 aa16.41■□□□□ 0.22
COPB1-209ENST00000533096 BICC1Q9H694 974 aaKnown RBP16.41■□□□□ 0.22
COPB1-209ENST00000533096 INPP5BP32019 993 aa16.4■□□□□ 0.22
COPB1-209ENST00000533096 DCAF15Q66K64 600 aa16.4■□□□□ 0.22
COPB1-209ENST00000533096 APOBEC3HQ6NTF7 200 aaKnown RBP16.4■□□□□ 0.22
COPB1-209ENST00000533096 CHRDL2Q6WN34 429 aa16.4■□□□□ 0.22
COPB1-209ENST00000533096 RAET1EQ8TD07 263 aa16.4■□□□□ 0.22
COPB1-209ENST00000533096 HOOK2Q96ED9 719 aa16.4■□□□□ 0.22
COPB1-209ENST00000533096 ZNF341Q9BYN7 854 aa16.4■□□□□ 0.22
COPB1-209ENST00000533096 PDHXO00330 501 aa16.39■□□□□ 0.21
COPB1-209ENST00000533096 PDE8BO95263 885 aa16.39■□□□□ 0.21
COPB1-209ENST00000533096 HOXD10P28358 340 aa16.39■□□□□ 0.21
COPB1-209ENST00000533096 ZEB1P37275 1124 aaPredicted RBP16.39■□□□□ 0.21
COPB1-209ENST00000533096 PPIL2Q13356 520 aa16.39■□□□□ 0.21
COPB1-209ENST00000533096 ZDHHC15Q96MV8 337 aa16.39■□□□□ 0.21
COPB1-209ENST00000533096 CTGFP29279 349 aa16.38■□□□□ 0.21
COPB1-209ENST00000533096 PPATQ06203 517 aa16.38■□□□□ 0.21
COPB1-209ENST00000533096 C17orf99Q6UX52 265 aa16.38■□□□□ 0.21
COPB1-209ENST00000533096 FAM83AQ86UY5 434 aa16.38■□□□□ 0.21
COPB1-209ENST00000533096 TRIM47Q96LD4 638 aa16.38■□□□□ 0.21
COPB1-209ENST00000533096 GNRH1P01148 92 aa16.37■□□□□ 0.21
COPB1-209ENST00000533096 IFIT1P09914 478 aaKnown RBP16.37■□□□□ 0.21
COPB1-209ENST00000533096 OSBPP22059 807 aa16.37■□□□□ 0.21
COPB1-209ENST00000533096 GRK4P32298 578 aa16.37■□□□□ 0.21
COPB1-209ENST00000533096 PRMT2P55345 433 aa16.37■□□□□ 0.21
COPB1-209ENST00000533096 MRIQ9BWK5 157 aa16.37■□□□□ 0.21
COPB1-209ENST00000533096 SRRDQ9UH36 339 aa16.37■□□□□ 0.21
COPB1-209ENST00000533096 ZNF646O15015 1829 aaPredicted RBP16.36■□□□□ 0.21
COPB1-209ENST00000533096 NCBP3Q53F19 620 aaKnown RBP16.36■□□□□ 0.21
COPB1-209ENST00000533096 HHIPL2Q6UWX4 724 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms