RNA–Protein interactions for RNA: ENST00000531502.5

CTSB-221, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-221ENST00000531502 CD99L2Q8TCZ2 262 aa18.21■□□□□ 0.51
CTSB-221ENST00000531502 ERO1AQ96HE7 468 aa18.21■□□□□ 0.51
CTSB-221ENST00000531502 ELP3Q9H9T3 547 aa18.21■□□□□ 0.51
CTSB-221ENST00000531502 PTPN22Q9Y2R2 807 aa18.21■□□□□ 0.51
CTSB-221ENST00000531502 RBBP6Q7Z6E9 1792 aaKnown RBP18.2■□□□□ 0.5
CTSB-221ENST00000531502 CRKP46108 304 aa18.2■□□□□ 0.5
CTSB-221ENST00000531502 OTUD7BQ6GQQ9 843 aa18.2■□□□□ 0.5
CTSB-221ENST00000531502 SLC4A10Q6U841 1118 aa18.2■□□□□ 0.5
CTSB-221ENST00000531502 OPTNQ96CV9 577 aa18.2■□□□□ 0.5
CTSB-221ENST00000531502 RABL6Q3YEC7 729 aaPredicted RBP18.19■□□□□ 0.5
CTSB-221ENST00000531502 INTS3Q68E01 1043 aaKnown RBP18.19■□□□□ 0.5
CTSB-221ENST00000531502 CNKSR2Q8WXI2 1034 aa18.19■□□□□ 0.5
CTSB-221ENST00000531502 TMEM39BQ9GZU3 492 aa18.19■□□□□ 0.5
CTSB-221ENST00000531502 KIAA0100Q14667 2235 aaKnown RBP18.19■□□□□ 0.5
CTSB-221ENST00000531502 MROH5Q6ZUA9 1318 aa18.19■□□□□ 0.5
CTSB-221ENST00000531502 MKI67P46013 3256 aaKnown RBP18.18■□□□□ 0.5
CTSB-221ENST00000531502 CENPFP49454 3210 aa18.18■□□□□ 0.5
CTSB-221ENST00000531502 TCP10L2B9ZVM9 353 aa18.18■□□□□ 0.5
CTSB-221ENST00000531502 SP3Q02447 781 aa18.18■□□□□ 0.5
CTSB-221ENST00000531502 VGLL2Q8N8G2 317 aa18.18■□□□□ 0.5
CTSB-221ENST00000531502 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.18■□□□□ 0.5
CTSB-221ENST00000531502 BRI3BPQ8WY22 251 aa18.18■□□□□ 0.5
CTSB-221ENST00000531502 ARMC5Q96C12 935 aa18.18■□□□□ 0.5
CTSB-221ENST00000531502 BICC1Q9H694 974 aaKnown RBP18.18■□□□□ 0.5
CTSB-221ENST00000531502 HDLBPQ00341 1268 aaKnown RBP18.17■□□□□ 0.5
CTSB-221ENST00000531502 VGLL4Q14135 290 aa18.17■□□□□ 0.5
CTSB-221ENST00000531502 LRRC24Q50LG9 513 aa18.17■□□□□ 0.5
CTSB-221ENST00000531502 ANKRD44Q8N8A2 993 aa18.17■□□□□ 0.5
CTSB-221ENST00000531502 EFCC1Q9HA90 598 aa18.17■□□□□ 0.5
CTSB-221ENST00000531502 IQSEC3Q9UPP2 1182 aaPredicted RBP18.17■□□□□ 0.5
CTSB-221ENST00000531502 MAP3K9P80192 1104 aa18.16■□□□□ 0.5
CTSB-221ENST00000531502 ZNF521Q96K83 1311 aa18.16■□□□□ 0.5
CTSB-221ENST00000531502 ANP32CO43423 234 aa18.15■□□□□ 0.5
CTSB-221ENST00000531502 TNNI2P48788 182 aa18.15■□□□□ 0.5
CTSB-221ENST00000531502 CCL15-CCL14A0A0B4J2E2 113 aa18.14■□□□□ 0.49
CTSB-221ENST00000531502 PDE8BO95263 885 aa18.14■□□□□ 0.49
CTSB-221ENST00000531502 GTF2A2P52657 109 aa18.14■□□□□ 0.49
CTSB-221ENST00000531502 CHAF1AQ13111 956 aaPredicted RBP18.14■□□□□ 0.49
CTSB-221ENST00000531502 CCL15Q16663 113 aa18.14■□□□□ 0.49
CTSB-221ENST00000531502 FAM43AQ8N2R8 423 aa18.14■□□□□ 0.49
CTSB-221ENST00000531502 TBC1D22AQ8WUA7 517 aa18.14■□□□□ 0.49
CTSB-221ENST00000531502 MRIQ9BWK5 157 aa18.14■□□□□ 0.49
CTSB-221ENST00000531502 BRCA2P51587 3418 aa18.14■□□□□ 0.49
CTSB-221ENST00000531502 CACNB3P54284 484 aa18.13■□□□□ 0.49
CTSB-221ENST00000531502 METTL24Q5JXM2 366 aa18.13■□□□□ 0.49
CTSB-221ENST00000531502 APOBEC3HQ6NTF7 200 aaKnown RBP18.13■□□□□ 0.49
CTSB-221ENST00000531502 VPS37DQ86XT2 251 aa18.13■□□□□ 0.49
CTSB-221ENST00000531502 MRPL50Q8N5N7 158 aaKnown RBP18.13■□□□□ 0.49
CTSB-221ENST00000531502 ZDHHC15Q96MV8 337 aa18.13■□□□□ 0.49
CTSB-221ENST00000531502 SNCAIPQ9Y6H5 919 aa18.13■□□□□ 0.49
CTSB-221ENST00000531502 SPDYE5A6NIY4 337 aa18.12■□□□□ 0.49
CTSB-221ENST00000531502 EN2P19622 333 aaPredicted RBP18.12■□□□□ 0.49
CTSB-221ENST00000531502 FGFR2P21802 821 aa18.12■□□□□ 0.49
CTSB-221ENST00000531502 BCAMP50895 628 aa18.12■□□□□ 0.49
CTSB-221ENST00000531502 TAF1CQ15572 869 aaPredicted RBP18.12■□□□□ 0.49
CTSB-221ENST00000531502 CAVIN4Q5BKX8 364 aa18.12■□□□□ 0.49
CTSB-221ENST00000531502 FAM83AQ86UY5 434 aa18.12■□□□□ 0.49
CTSB-221ENST00000531502 KLHDC4Q8TBB5 520 aa18.12■□□□□ 0.49
CTSB-221ENST00000531502 TEKT1Q969V4 418 aa18.12■□□□□ 0.49
CTSB-221ENST00000531502 OTUD5Q96G74 571 aa18.12■□□□□ 0.49
CTSB-221ENST00000531502 ZNF333Q96JL9 665 aa18.12■□□□□ 0.49
CTSB-221ENST00000531502 ZFYVE28Q9HCC9 887 aa18.12■□□□□ 0.49
CTSB-221ENST00000531502 CSADQ9Y600 493 aa18.12■□□□□ 0.49
CTSB-221ENST00000531502 FKBP1CQ5VVH2 108 aa18.11■□□□□ 0.49
CTSB-221ENST00000531502 FAM9BQ8IZU0 186 aa18.11■□□□□ 0.49
CTSB-221ENST00000531502 GCC1Q96CN9 775 aa18.11■□□□□ 0.49
CTSB-221ENST00000531502 ZSWIM8A7E2V4 1837 aa18.1■□□□□ 0.49
CTSB-221ENST00000531502 KIF16BQ96L93 1317 aa18.1■□□□□ 0.49
CTSB-221ENST00000531502 USP44Q9H0E7 712 aa18.1■□□□□ 0.49
CTSB-221ENST00000531502 SUGT1Q9Y2Z0 365 aa18.1■□□□□ 0.49
CTSB-221ENST00000531502 PTCH2Q9Y6C5 1203 aa18.1■□□□□ 0.49
CTSB-221ENST00000531502 RPAP1Q9BWH6 1393 aaPredicted RBP18.09■□□□□ 0.49
CTSB-221ENST00000531502 PTPRCP08575 1304 aa18.09■□□□□ 0.49
CTSB-221ENST00000531502 FRAT2O75474 233 aaPredicted RBP18.09■□□□□ 0.49
CTSB-221ENST00000531502 RFX5P48382 616 aaPredicted RBP18.09■□□□□ 0.49
CTSB-221ENST00000531502 HHIPL2Q6UWX4 724 aa18.09■□□□□ 0.49
CTSB-221ENST00000531502 ERO1BQ86YB8 467 aa18.09■□□□□ 0.49
CTSB-221ENST00000531502 ZKSCAN4Q969J2 545 aaPredicted RBP18.09■□□□□ 0.49
CTSB-221ENST00000531502 WRNIP1Q96S55 665 aa18.09■□□□□ 0.49
CTSB-221ENST00000531502 ZCCHC17Q9NP64 241 aaKnown RBP18.09■□□□□ 0.49
CTSB-221ENST00000531502 BTBD19C9JJ37 291 aa18.08■□□□□ 0.48
CTSB-221ENST00000531502 IRF6O14896 467 aa18.08■□□□□ 0.48
CTSB-221ENST00000531502 TLR2O60603 784 aa18.08■□□□□ 0.48
CTSB-221ENST00000531502 HABP4Q5JVS0 413 aaKnown RBP18.08■□□□□ 0.48
CTSB-221ENST00000531502 MAST3O60307 1309 aa18.07■□□□□ 0.48
CTSB-221ENST00000531502 CETPP11597 493 aa18.07■□□□□ 0.48
CTSB-221ENST00000531502 PPIL2Q13356 520 aa18.07■□□□□ 0.48
CTSB-221ENST00000531502 ARHGEF6Q15052 776 aa18.07■□□□□ 0.48
CTSB-221ENST00000531502 PUM3Q15397 648 aaKnown RBP18.07■□□□□ 0.48
CTSB-221ENST00000531502 SSH1Q8WYL5 1049 aa18.07■□□□□ 0.48
CTSB-221ENST00000531502 ARHGAP39Q9C0H5 1083 aa18.07■□□□□ 0.48
CTSB-221ENST00000531502 TMOD2Q9NZR1 351 aa18.07■□□□□ 0.48
CTSB-221ENST00000531502 MYH13Q9UKX3 1938 aa18.06■□□□□ 0.48
CTSB-221ENST00000531502 IFIT1P09914 478 aaKnown RBP18.06■□□□□ 0.48
CTSB-221ENST00000531502 SNAPC2Q13487 334 aa18.06■□□□□ 0.48
CTSB-221ENST00000531502 SLC9C1Q4G0N8 1177 aa18.06■□□□□ 0.48
CTSB-221ENST00000531502 HOOK2Q96ED9 719 aa18.06■□□□□ 0.48
CTSB-221ENST00000531502 EYA2O00167 538 aa18.05■□□□□ 0.48
CTSB-221ENST00000531502 INPP5BP32019 993 aa18.05■□□□□ 0.48
CTSB-221ENST00000531502 LACTBP83111 547 aaPredicted RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms