RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 PZPP20742 1482 aa8.6□□□□□ -1.03
CTNND1-223ENST00000529986 GOLGA6BA6NDN3 693 aa8.6□□□□□ -1.03
CTNND1-223ENST00000529986 NOL3O60936 208 aaKnown RBP8.6□□□□□ -1.03
CTNND1-223ENST00000529986 CCDC172P0C7W6 258 aa8.6□□□□□ -1.03
CTNND1-223ENST00000529986 CCDC174Q6PII3 467 aa8.6□□□□□ -1.03
CTNND1-223ENST00000529986 RUFY3Q7L099 469 aa8.6□□□□□ -1.03
CTNND1-223ENST00000529986 OTUD7AQ8TE49 926 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-223ENST00000529986 PRDM11Q9NQV5 511 aa8.6□□□□□ -1.03
CTNND1-223ENST00000529986 LMBRD1Q9NUN5 540 aa8.6□□□□□ -1.03
CTNND1-223ENST00000529986 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.6□□□□□ -1.035e-6■■■□□ 17.3
CTNND1-223ENST00000529986 IQSEC3Q9UPP2 1182 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-223ENST00000529986 CTNND2Q9UQB3 1225 aa8.6□□□□□ -1.03
CTNND1-223ENST00000529986 MCM7P33993 719 aa8.6□□□□□ -1.03
CTNND1-223ENST00000529986 TPD52P55327 224 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-223ENST00000529986 UAP1Q16222 522 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-223ENST00000529986 BANK1Q8NDB2 785 aa8.6□□□□□ -1.03
CTNND1-223ENST00000529986 MICAL1Q8TDZ2 1067 aa8.6□□□□□ -1.03
CTNND1-223ENST00000529986 LMBR1Q8WVP7 490 aa8.6□□□□□ -1.03
CTNND1-223ENST00000529986 MTRF1LQ9UGC7 380 aaKnown RBP8.6□□□□□ -1.03
CTNND1-223ENST00000529986 CAPN7Q9Y6W3 813 aa8.6□□□□□ -1.03
CTNND1-223ENST00000529986 IL16Q14005 1332 aa8.6□□□□□ -1.03
CTNND1-223ENST00000529986 ABCC2Q92887 1545 aa8.59□□□□□ -1.03
CTNND1-223ENST00000529986 E7EVH7 732 aa8.59□□□□□ -1.03
CTNND1-223ENST00000529986 TUBBP07437 444 aa8.59□□□□□ -1.03
CTNND1-223ENST00000529986 IRX5P78411 483 aaPredicted RBP8.59□□□□□ -1.03
CTNND1-223ENST00000529986 IFIT1BQ5T764 474 aaKnown RBP8.59□□□□□ -1.03
CTNND1-223ENST00000529986 BICD1Q96G01 975 aa8.59□□□□□ -1.03
CTNND1-223ENST00000529986 SYNCQ9H7C4 482 aa8.59□□□□□ -1.03
CTNND1-223ENST00000529986 CHMLP26374 656 aa8.59□□□□□ -1.03
CTNND1-223ENST00000529986 GCKP35557 465 aa8.59□□□□□ -1.03
CTNND1-223ENST00000529986 PEX19P40855 299 aa8.59□□□□□ -1.03
CTNND1-223ENST00000529986 LIG3P49916 1009 aa8.59□□□□□ -1.03
CTNND1-223ENST00000529986 NEDD9Q14511 834 aa8.59□□□□□ -1.03
CTNND1-223ENST00000529986 DDX12PQ92771 950 aa8.59□□□□□ -1.03
CTNND1-223ENST00000529986 ARHGEF2Q92974 986 aaKnown RBP8.59□□□□□ -1.03
CTNND1-223ENST00000529986 IFT74Q96LB3 600 aa8.59□□□□□ -1.03
CTNND1-223ENST00000529986 TRIM7Q9C029 511 aa8.59□□□□□ -1.03
CTNND1-223ENST00000529986 FAM170AA1A519 330 aa8.59□□□□□ -1.03
CTNND1-223ENST00000529986 LRMPQ12912 555 aa8.59□□□□□ -1.03
CTNND1-223ENST00000529986 STXBP4Q6ZWJ1 553 aa8.59□□□□□ -1.03
CTNND1-223ENST00000529986 RAB3IL1Q8TBN0 382 aa8.59□□□□□ -1.03
CTNND1-223ENST00000529986 NKIRAS1Q9NYS0 192 aa8.59□□□□□ -1.03
CTNND1-223ENST00000529986 ATP2A1O14983 1001 aa8.59□□□□□ -1.03
CTNND1-223ENST00000529986 ZNF131P52739 623 aa8.59□□□□□ -1.03
CTNND1-223ENST00000529986 RAPGEF1Q13905 1077 aa8.59□□□□□ -1.03
CTNND1-223ENST00000529986 AKNAD1Q5T1N1 836 aa8.59□□□□□ -1.03
CTNND1-223ENST00000529986 SND1Q7KZF4 910 aaKnown RBP eCLIP8.59□□□□□ -1.03
CTNND1-223ENST00000529986 RPUSD2Q8IZ73 545 aaKnown RBP8.59□□□□□ -1.03
CTNND1-223ENST00000529986 ANAPC4Q9UJX5 808 aa8.59□□□□□ -1.03
CTNND1-223ENST00000529986 ATP8B2P98198 1209 aa8.59□□□□□ -1.04
CTNND1-223ENST00000529986 PDE1CQ14123 709 aaPredicted RBP8.59□□□□□ -1.04
CTNND1-223ENST00000529986 LRRC27Q9C0I9 530 aa8.59□□□□□ -1.04
CTNND1-223ENST00000529986 CHPF2Q9P2E5 772 aa8.59□□□□□ -1.04
CTNND1-223ENST00000529986 STK38LQ9Y2H1 464 aa8.59□□□□□ -1.04
CTNND1-223ENST00000529986 ABCC10Q5T3U5 1492 aa8.58□□□□□ -1.04
CTNND1-223ENST00000529986 RFC1P35251 1148 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-223ENST00000529986 PDE4BQ07343 736 aa8.58□□□□□ -1.04
CTNND1-223ENST00000529986 CALCOCO2Q13137 446 aa8.58□□□□□ -1.04
CTNND1-223ENST00000529986 MAP7D1Q3KQU3 841 aa8.58□□□□□ -1.04
CTNND1-223ENST00000529986 CEP85Q6P2H3 762 aa8.58□□□□□ -1.04
CTNND1-223ENST00000529986 CACNA2D3Q8IZS8 1091 aa8.58□□□□□ -1.04
CTNND1-223ENST00000529986 TSPYL6Q8N831 410 aa8.58□□□□□ -1.04
CTNND1-223ENST00000529986 SREK1Q8WXA9 508 aaKnown RBP8.58□□□□□ -1.04
CTNND1-223ENST00000529986 ARHGAP45Q92619 1136 aa8.58□□□□□ -1.04
CTNND1-223ENST00000529986 PPANQ9NQ55 473 aaKnown RBP8.58□□□□□ -1.04
CTNND1-223ENST00000529986 ATP6V0A2Q9Y487 856 aa8.58□□□□□ -1.04
CTNND1-223ENST00000529986 PIK3R4Q99570 1358 aa8.58□□□□□ -1.04
CTNND1-223ENST00000529986 TRAPPC8Q9Y2L5 1435 aa8.58□□□□□ -1.04
CTNND1-223ENST00000529986 CIB2O75838 187 aa8.58□□□□□ -1.04
CTNND1-223ENST00000529986 ERCC5P28715 1186 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-223ENST00000529986 PRPHP41219 470 aa8.58□□□□□ -1.04
CTNND1-223ENST00000529986 DIXDC1Q155Q3 683 aa8.58□□□□□ -1.04
CTNND1-223ENST00000529986 ANKRD24Q8TF21 1146 aa8.58□□□□□ -1.04
CTNND1-223ENST00000529986 CLSTN2Q9H4D0 955 aa8.58□□□□□ -1.04
CTNND1-223ENST00000529986 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-223ENST00000529986 SLC4A4Q9Y6R1 1079 aa8.58□□□□□ -1.04
CTNND1-223ENST00000529986 TTC21BQ7Z4L5 1316 aa8.58□□□□□ -1.04
CTNND1-223ENST00000529986 UHRF1BP1Q6BDS2 1440 aa8.58□□□□□ -1.04
CTNND1-223ENST00000529986 TEX14Q8IWB6 1497 aa8.58□□□□□ -1.04
CTNND1-223ENST00000529986 ERCC3P19447 782 aa8.58□□□□□ -1.04
CTNND1-223ENST00000529986 MTX1Q13505 466 aa8.58□□□□□ -1.04
CTNND1-223ENST00000529986 KRT24Q2M2I5 525 aa8.58□□□□□ -1.04
CTNND1-223ENST00000529986 KLHL7Q8IXQ5 586 aa8.58□□□□□ -1.04
CTNND1-223ENST00000529986 DCTPP1Q9H773 170 aa8.58□□□□□ -1.04
CTNND1-223ENST00000529986 ZNF215Q9UL58 517 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-223ENST00000529986 TRIM68Q6AZZ1 485 aa8.58□□□□□ -1.04
CTNND1-223ENST00000529986 OTUD7BQ6GQQ9 843 aa8.58□□□□□ -1.04
CTNND1-223ENST00000529986 VSIG1Q86XK7 387 aa8.58□□□□□ -1.04
CTNND1-223ENST00000529986 JAKMIP2Q96AA8 810 aa8.58□□□□□ -1.04
CTNND1-223ENST00000529986 HINFPQ9BQA5 517 aa8.58□□□□□ -1.04
CTNND1-223ENST00000529986 BMP15O95972 392 aa8.57□□□□□ -1.04
CTNND1-223ENST00000529986 GBP1P32455 592 aa8.57□□□□□ -1.04
CTNND1-223ENST00000529986 ARHGAP25P42331 645 aa8.57□□□□□ -1.04
CTNND1-223ENST00000529986 FBXO31Q5XUX0 539 aaPredicted RBP8.57□□□□□ -1.04
CTNND1-223ENST00000529986 MYCBPQ99417 103 aaPredicted RBP8.57□□□□□ -1.04
CTNND1-223ENST00000529986 ZBTB40Q9NUA8 1239 aa8.57□□□□□ -1.04
CTNND1-223ENST00000529986 TXNDC9O14530 226 aa8.57□□□□□ -1.04
CTNND1-223ENST00000529986 PLS1Q14651 629 aa8.57□□□□□ -1.04
CTNND1-223ENST00000529986 PSMD6Q15008 389 aa8.57□□□□□ -1.04
CTNND1-223ENST00000529986 GKAP1Q5VSY0 366 aaPredicted RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 215.3 ms