RNA–Protein interactions for RNA: ENST00000527442.5

PKP3-205, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-205ENST00000527442 SUPT20HL1Q3ZLR7 823 aa26.21■■□□□ 1.79
PKP3-205ENST00000527442 TMEM57Q8N5G2 664 aa26.21■■□□□ 1.79
PKP3-205ENST00000527442 CD99L2Q8TCZ2 262 aa26.21■■□□□ 1.79
PKP3-205ENST00000527442 UNCXA6NJT0 531 aa26.2■■□□□ 1.78
PKP3-205ENST00000527442 USP2O75604 605 aaPredicted RBP26.2■■□□□ 1.78
PKP3-205ENST00000527442 FKBP1AP62942 108 aaKnown RBP26.2■■□□□ 1.78
PKP3-205ENST00000527442 ERO1AQ96HE7 468 aa26.2■■□□□ 1.78
PKP3-205ENST00000527442 CRBNQ96SW2 442 aa26.2■■□□□ 1.78
PKP3-205ENST00000527442 PTPN22Q9Y2R2 807 aa26.2■■□□□ 1.78
PKP3-205ENST00000527442 MKI67P46013 3256 aaKnown RBP26.2■■□□□ 1.78
PKP3-205ENST00000527442 CENPFP49454 3210 aa26.2■■□□□ 1.78
PKP3-205ENST00000527442 IREB2P48200 963 aaKnown RBP26.19■■□□□ 1.78
PKP3-205ENST00000527442 IFIT5Q13325 482 aaKnown RBP26.19■■□□□ 1.78
PKP3-205ENST00000527442 GCC1Q96CN9 775 aa26.19■■□□□ 1.78
PKP3-205ENST00000527442 CHMP3Q9Y3E7 222 aa26.19■■□□□ 1.78
PKP3-205ENST00000527442 KIAA0100Q14667 2235 aaKnown RBP26.19■■□□□ 1.78
PKP3-205ENST00000527442 CAP1Q01518 475 aa26.18■■□□□ 1.78
PKP3-205ENST00000527442 RASA3Q14644 834 aa26.18■■□□□ 1.78
PKP3-205ENST00000527442 ERICH6BQ5W0A0 696 aa26.18■■□□□ 1.78
PKP3-205ENST00000527442 PTPN18Q99952 460 aa26.18■■□□□ 1.78
PKP3-205ENST00000527442 COG6Q9Y2V7 657 aa26.18■■□□□ 1.78
PKP3-205ENST00000527442 ANKRD13AQ8IZ07 590 aa26.17■■□□□ 1.78
PKP3-205ENST00000527442 RBM5P52756 815 aaKnown RBP eCLIP26.16■■□□□ 1.78
PKP3-205ENST00000527442 OTUD7BQ6GQQ9 843 aa26.16■■□□□ 1.78
PKP3-205ENST00000527442 ZNF594Q96JF6 807 aaPredicted RBP26.16■■□□□ 1.78
PKP3-205ENST00000527442 DDX19BQ9UMR2 479 aa26.16■■□□□ 1.78
PKP3-205ENST00000527442 TESPA1A2RU30 521 aaPredicted RBP26.15■■□□□ 1.78
PKP3-205ENST00000527442 EPHA10Q5JZY3 1008 aa26.15■■□□□ 1.78
PKP3-205ENST00000527442 BEND3Q5T5X7 828 aa26.15■■□□□ 1.78
PKP3-205ENST00000527442 SLC4A10Q6U841 1118 aa26.15■■□□□ 1.78
PKP3-205ENST00000527442 ITPRIPQ8IWB1 547 aa26.15■■□□□ 1.78
PKP3-205ENST00000527442 ARMC5Q96C12 935 aa26.15■■□□□ 1.78
PKP3-205ENST00000527442 ELP3Q9H9T3 547 aa26.15■■□□□ 1.78
PKP3-205ENST00000527442 EFCC1Q9HA90 598 aa26.15■■□□□ 1.78
PKP3-205ENST00000527442 SPDYE2Q495Y8 402 aa26.14■■□□□ 1.78
PKP3-205ENST00000527442 HABP4Q5JVS0 413 aaKnown RBP26.14■■□□□ 1.78
PKP3-205ENST00000527442 LMBR1LQ6UX01 489 aa26.14■■□□□ 1.78
PKP3-205ENST00000527442 CDAN1Q8IWY9 1227 aa26.14■■□□□ 1.78
PKP3-205ENST00000527442 EXOC6Q8TAG9 804 aa26.14■■□□□ 1.78
PKP3-205ENST00000527442 FAM205AQ6ZU69 1335 aa26.14■■□□□ 1.77
PKP3-205ENST00000527442 SP3Q02447 781 aa26.13■■□□□ 1.77
PKP3-205ENST00000527442 OPTNQ96CV9 577 aa26.13■■□□□ 1.77
PKP3-205ENST00000527442 ZNF70Q9UC06 446 aaPredicted RBP26.13■■□□□ 1.77
PKP3-205ENST00000527442 ZSWIM8A7E2V4 1837 aa26.13■■□□□ 1.77
PKP3-205ENST00000527442 ALDH1L1O75891 902 aa26.12■■□□□ 1.77
PKP3-205ENST00000527442 EN2P19622 333 aaPredicted RBP26.12■■□□□ 1.77
PKP3-205ENST00000527442 LDHAL6AQ6ZMR3 332 aa26.12■■□□□ 1.77
PKP3-205ENST00000527442 SRCIN1Q9C0H9 1055 aa26.12■■□□□ 1.77
PKP3-205ENST00000527442 BRCA2P51587 3418 aa26.11■■□□□ 1.77
PKP3-205ENST00000527442 AAMPQ13685 434 aa26.11■■□□□ 1.77
PKP3-205ENST00000527442 MFSD14BQ5SR56 506 aa26.11■■□□□ 1.77
PKP3-205ENST00000527442 CNKSR2Q8WXI2 1034 aa26.11■■□□□ 1.77
PKP3-205ENST00000527442 MS4A4AQ96JQ5 239 aa26.11■■□□□ 1.77
PKP3-205ENST00000527442 TEPSINQ96N21 525 aa26.11■■□□□ 1.77
PKP3-205ENST00000527442 CHMP4BQ9H444 224 aaKnown RBP26.11■■□□□ 1.77
PKP3-205ENST00000527442 TDRD3Q9H7E2 651 aaKnown RBP26.11■■□□□ 1.77
PKP3-205ENST00000527442 CNNM1Q9NRU3 951 aa26.11■■□□□ 1.77
PKP3-205ENST00000527442 TNFAIP1Q13829 316 aa26.1■■□□□ 1.77
PKP3-205ENST00000527442 CCDC57Q2TAC2 916 aa26.1■■□□□ 1.77
PKP3-205ENST00000527442 TAF7LQ5H9L4 462 aa26.1■■□□□ 1.77
PKP3-205ENST00000527442 TDRD7Q8NHU6 1098 aaKnown RBP26.1■■□□□ 1.77
PKP3-205ENST00000527442 TTF2Q9UNY4 1162 aaKnown RBP26.1■■□□□ 1.77
PKP3-205ENST00000527442 GYG1P46976 350 aa26.09■■□□□ 1.77
PKP3-205ENST00000527442 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.09■■□□□ 1.77
PKP3-205ENST00000527442 BRI3BPQ8WY22 251 aa26.09■■□□□ 1.77
PKP3-205ENST00000527442 SERPINA10Q9UK55 444 aa26.09■■□□□ 1.77
PKP3-205ENST00000527442 ZBTB7BO15156 539 aaPredicted RBP26.08■■□□□ 1.77
PKP3-205ENST00000527442 GRM8O00222 908 aa26.07■■□□□ 1.76
PKP3-205ENST00000527442 GTF3C3Q9Y5Q9 886 aa26.07■■□□□ 1.76
PKP3-205ENST00000527442 CCL15-CCL14A0A0B4J2E2 113 aa26.06■■□□□ 1.76
PKP3-205ENST00000527442 TCP10L2B9ZVM9 353 aa26.06■■□□□ 1.76
PKP3-205ENST00000527442 VGLL4Q14135 290 aa26.06■■□□□ 1.76
PKP3-205ENST00000527442 TAF1CQ15572 869 aaPredicted RBP26.06■■□□□ 1.76
PKP3-205ENST00000527442 CCL15Q16663 113 aa26.06■■□□□ 1.76
PKP3-205ENST00000527442 ZNF333Q96JL9 665 aa26.06■■□□□ 1.76
PKP3-205ENST00000527442 TMEM39BQ9GZU3 492 aa26.06■■□□□ 1.76
PKP3-205ENST00000527442 PTCH2Q9Y6C5 1203 aa26.06■■□□□ 1.76
PKP3-205ENST00000527442 HIBADHP31937 336 aaKnown RBP26.05■■□□□ 1.76
PKP3-205ENST00000527442 UBE4AQ14139 1066 aa26.05■■□□□ 1.76
PKP3-205ENST00000527442 GRIK5Q16478 980 aa26.05■■□□□ 1.76
PKP3-205ENST00000527442 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.05■■□□□ 1.76
PKP3-205ENST00000527442 FAM84BQ96KN1 310 aaPredicted RBP26.05■■□□□ 1.76
PKP3-205ENST00000527442 ZBTB40Q9NUA8 1239 aa26.05■■□□□ 1.76
PKP3-205ENST00000527442 CRKP46108 304 aa26.04■■□□□ 1.76
PKP3-205ENST00000527442 FAM43AQ8N2R8 423 aa26.04■■□□□ 1.76
PKP3-205ENST00000527442 PUS3Q9BZE2 481 aaKnown RBP26.04■■□□□ 1.76
PKP3-205ENST00000527442 GTF2A2P52657 109 aa26.03■■□□□ 1.76
PKP3-205ENST00000527442 OTUD5Q96G74 571 aa26.03■■□□□ 1.76
PKP3-205ENST00000527442 MEIS3Q99687 375 aa26.03■■□□□ 1.76
PKP3-205ENST00000527442 ZFYVE28Q9HCC9 887 aa26.03■■□□□ 1.76
PKP3-205ENST00000527442 UTYO14607 1347 aa26.03■■□□□ 1.76
PKP3-205ENST00000527442 MAP3K9P80192 1104 aa26.02■■□□□ 1.76
PKP3-205ENST00000527442 SLC9C1Q4G0N8 1177 aa26.02■■□□□ 1.76
PKP3-205ENST00000527442 TMEM106CQ9BVX2 250 aa26.02■■□□□ 1.76
PKP3-205ENST00000527442 USP44Q9H0E7 712 aa26.02■■□□□ 1.76
PKP3-205ENST00000527442 C9orf78Q9NZ63 289 aaPredicted RBP26.02■■□□□ 1.76
PKP3-205ENST00000527442 GNAI3P08754 354 aa26.01■■□□□ 1.75
PKP3-205ENST00000527442 TNNI2P48788 182 aa26.01■■□□□ 1.75
PKP3-205ENST00000527442 IQSEC3Q9UPP2 1182 aaPredicted RBP26.01■■□□□ 1.75
PKP3-205ENST00000527442 CSADQ9Y600 493 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 190 ms