RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 SEC31BQ9NQW1 1179 aa20.56■□□□□ 0.88
USH1C-205ENST00000527020 ORC3Q9UBD5 711 aaPredicted RBP20.56■□□□□ 0.88
USH1C-205ENST00000527020 CAMTA2O94983 1202 aa20.56■□□□□ 0.88
USH1C-205ENST00000527020 TDRD7Q8NHU6 1098 aaKnown RBP20.56■□□□□ 0.88
USH1C-205ENST00000527020 DNAJC25Q9H1X3 360 aa20.56■□□□□ 0.88
USH1C-205ENST00000527020 GJB4Q9NTQ9 266 aa20.56■□□□□ 0.88
USH1C-205ENST00000527020 RTEL1Q9NZ71 1219 aa20.56■□□□□ 0.88
USH1C-205ENST00000527020 DHX16O60231 1041 aaKnown RBP20.55■□□□□ 0.88
USH1C-205ENST00000527020 FBXO18Q8NFZ0 1043 aa20.55■□□□□ 0.88
USH1C-205ENST00000527020 C8orf76Q96K31 380 aa20.55■□□□□ 0.88
USH1C-205ENST00000527020 COL4A1P02462 1669 aa20.55■□□□□ 0.88
USH1C-205ENST00000527020 FAM177BA6PVY3 158 aa20.55■□□□□ 0.88
USH1C-205ENST00000527020 ITPK1Q13572 414 aa20.55■□□□□ 0.88
USH1C-205ENST00000527020 RASGRF1Q13972 1273 aa20.55■□□□□ 0.88
USH1C-205ENST00000527020 SPATA5Q8NB90 893 aa20.55■□□□□ 0.88
USH1C-205ENST00000527020 ACSBG1Q96GR2 724 aa20.55■□□□□ 0.88
USH1C-205ENST00000527020 CDCA7Q9BWT1 371 aaPredicted RBP20.55■□□□□ 0.88
USH1C-205ENST00000527020 SH2B2O14492 632 aaPredicted RBP20.54■□□□□ 0.88
USH1C-205ENST00000527020 ATP6V1AP38606 617 aa20.54■□□□□ 0.88
USH1C-205ENST00000527020 ZNF165P49910 485 aa20.54■□□□□ 0.88
USH1C-205ENST00000527020 DDB1Q16531 1140 aa20.54■□□□□ 0.88
USH1C-205ENST00000527020 C17orf53Q8N3J3 647 aaPredicted RBP20.54■□□□□ 0.88
USH1C-205ENST00000527020 MARCH10Q8NA82 808 aaPredicted RBP20.54■□□□□ 0.88
USH1C-205ENST00000527020 SPC24Q8NBT2 197 aa20.54■□□□□ 0.88
USH1C-205ENST00000527020 UTP14AQ9BVJ6 771 aaKnown RBP20.54■□□□□ 0.88
USH1C-205ENST00000527020 ANGEL1Q9UNK9 670 aaKnown RBP20.54■□□□□ 0.88
USH1C-205ENST00000527020 APPP05067 770 aa20.53■□□□□ 0.88
USH1C-205ENST00000527020 SLC5A1P13866 664 aa20.53■□□□□ 0.88
USH1C-205ENST00000527020 NOLC1Q14978 699 aaKnown RBP eCLIP20.53■□□□□ 0.88
USH1C-205ENST00000527020 ALX1Q15699 326 aa20.53■□□□□ 0.88
USH1C-205ENST00000527020 SENP2Q9HC62 589 aa20.53■□□□□ 0.88
USH1C-205ENST00000527020 EPB41L4AQ9HCS5 686 aaPredicted RBP20.53■□□□□ 0.88
USH1C-205ENST00000527020 PCDHA7Q9UN72 937 aa20.53■□□□□ 0.88
USH1C-205ENST00000527020 NEDD4P46934 1319 aa20.53■□□□□ 0.88
USH1C-205ENST00000527020 BCORQ6W2J9 1755 aa20.53■□□□□ 0.88
USH1C-205ENST00000527020 LOC102724428A0A0B4J2F2 783 aa20.53■□□□□ 0.88
USH1C-205ENST00000527020 ME1P48163 572 aa20.53■□□□□ 0.88
USH1C-205ENST00000527020 SIK1P57059 783 aa20.53■□□□□ 0.88
USH1C-205ENST00000527020 FAM160A1Q05DH4 1040 aa20.53■□□□□ 0.88
USH1C-205ENST00000527020 TRDNQ13061 729 aa20.53■□□□□ 0.88
USH1C-205ENST00000527020 CLIC4Q9Y696 253 aa20.53■□□□□ 0.88
USH1C-205ENST00000527020 ZMYM6O95789 1325 aa20.53■□□□□ 0.88
USH1C-205ENST00000527020 TIAM2Q8IVF5 1701 aa20.52■□□□□ 0.88
USH1C-205ENST00000527020 CASZ1Q86V15 1759 aa20.52■□□□□ 0.88
USH1C-205ENST00000527020 B4E1Z4 1266 aa20.52■□□□□ 0.88
USH1C-205ENST00000527020 KIF28PB7ZC32 967 aa20.52■□□□□ 0.88
USH1C-205ENST00000527020 CTAGE5O15320 804 aa20.52■□□□□ 0.88
USH1C-205ENST00000527020 CCDC73Q6ZRK6 1079 aa20.52■□□□□ 0.88
USH1C-205ENST00000527020 FSIP1Q8NA03 581 aa20.52■□□□□ 0.88
USH1C-205ENST00000527020 LINC00301Q8NCQ3 95 aa20.52■□□□□ 0.88
USH1C-205ENST00000527020 SPTLC3Q9NUV7 552 aa20.52■□□□□ 0.88
USH1C-205ENST00000527020 COL5A3P25940 1745 aaPredicted RBP20.52■□□□□ 0.88
USH1C-205ENST00000527020 A0A1B0GUL6 1792 aa20.52■□□□□ 0.88
USH1C-205ENST00000527020 CPLX1O14810 134 aa20.52■□□□□ 0.88
USH1C-205ENST00000527020 NTSR2O95665 410 aa20.52■□□□□ 0.88
USH1C-205ENST00000527020 C11orf57Q6ZUT1 292 aaPredicted RBP20.52■□□□□ 0.88
USH1C-205ENST00000527020 PLA2G4DQ86XP0 818 aa20.52■□□□□ 0.88
USH1C-205ENST00000527020 AIDAQ96BJ3 306 aa20.52■□□□□ 0.88
USH1C-205ENST00000527020 INCENPQ9NQS7 918 aa20.52■□□□□ 0.88
USH1C-205ENST00000527020 THRAP3Q9Y2W1 955 aaKnown RBP20.52■□□□□ 0.88
USH1C-205ENST00000527020 TACC3Q9Y6A5 838 aa20.52■□□□□ 0.88
USH1C-205ENST00000527020 ADAMTS2O95450 1211 aa20.51■□□□□ 0.87
USH1C-205ENST00000527020 POLR3DP05423 398 aaPredicted RBP20.51■□□□□ 0.87
USH1C-205ENST00000527020 IQCB1Q15051 598 aa20.51■□□□□ 0.87
USH1C-205ENST00000527020 MAGEB6Q8N7X4 407 aa20.51■□□□□ 0.87
USH1C-205ENST00000527020 MPHOSPH8Q99549 860 aa20.51■□□□□ 0.87
USH1C-205ENST00000527020 RTL9Q8NET4 1388 aa20.51■□□□□ 0.87
USH1C-205ENST00000527020 MYSM1Q5VVJ2 828 aa20.51■□□□□ 0.87
USH1C-205ENST00000527020 ADALQ6DHV7 355 aa20.51■□□□□ 0.87
USH1C-205ENST00000527020 FMR1NBQ8N0W7 255 aaPredicted RBP20.51■□□□□ 0.87
USH1C-205ENST00000527020 IGDCC4Q8TDY8 1250 aa20.51■□□□□ 0.87
USH1C-205ENST00000527020 PYCARDQ9ULZ3 195 aa20.51■□□□□ 0.87
USH1C-205ENST00000527020 BCL9LQ86UU0 1499 aa20.5■□□□□ 0.87
USH1C-205ENST00000527020 A0A0G2JS52 829 aa20.5■□□□□ 0.87
USH1C-205ENST00000527020 PATL2C9JE40 543 aaKnown RBP20.5■□□□□ 0.87
USH1C-205ENST00000527020 MBD4O95243 580 aa20.5■□□□□ 0.87
USH1C-205ENST00000527020 CAVIN2O95810 425 aa20.5■□□□□ 0.87
USH1C-205ENST00000527020 ZNF75DP51815 510 aa20.5■□□□□ 0.87
USH1C-205ENST00000527020 KIF23Q02241 960 aaPredicted RBP20.5■□□□□ 0.87
USH1C-205ENST00000527020 PARP10Q53GL7 1025 aa20.5■□□□□ 0.87
USH1C-205ENST00000527020 APOA5Q6Q788 366 aa20.5■□□□□ 0.87
USH1C-205ENST00000527020 AIFM3Q96NN9 605 aa20.5■□□□□ 0.87
USH1C-205ENST00000527020 POLR3EQ9NVU0 708 aa20.5■□□□□ 0.87
USH1C-205ENST00000527020 A0A1W2PQ27 194 aa20.49■□□□□ 0.87
USH1C-205ENST00000527020 A0A1W2PQ64 194 aa20.49■□□□□ 0.87
USH1C-205ENST00000527020 A0A1W2PQD8 194 aa20.49■□□□□ 0.87
USH1C-205ENST00000527020 TPM3P06753 285 aa20.49■□□□□ 0.87
USH1C-205ENST00000527020 CDC27P30260 824 aa20.49■□□□□ 0.87
USH1C-205ENST00000527020 BRAPQ7Z569 592 aa20.49■□□□□ 0.87
USH1C-205ENST00000527020 IFNL3Q8IZI9 196 aa20.49■□□□□ 0.87
USH1C-205ENST00000527020 KIAA1524Q8TCG1 905 aa20.49■□□□□ 0.87
USH1C-205ENST00000527020 MRPS27Q92552 414 aaKnown RBP20.49■□□□□ 0.87
USH1C-205ENST00000527020 KINO60870 393 aaKnown RBP20.49■□□□□ 0.87
USH1C-205ENST00000527020 YEATS4O95619 227 aa20.49■□□□□ 0.87
USH1C-205ENST00000527020 RXRAP19793 462 aa20.49■□□□□ 0.87
USH1C-205ENST00000527020 METAP2P50579 478 aaKnown RBP eCLIP20.49■□□□□ 0.87
USH1C-205ENST00000527020 BCAMP50895 628 aa20.49■□□□□ 0.87
USH1C-205ENST00000527020 MAP3K12Q12852 859 aa20.49■□□□□ 0.87
USH1C-205ENST00000527020 STX1AQ16623 288 aa20.49■□□□□ 0.87
USH1C-205ENST00000527020 CCDC152Q4G0S7 254 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms