RNA–Protein interactions for RNA: ENST00000526991.2

CHMP1B-201, Transcript of charged multivesicular body protein 1B, humanhuman

APPRIS P1 BASIC

Gene CHMP1B, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-201ENST00000526991 GOLGA6L6A8MZA4 724 aa13.98□□□□□ -0.17
CHMP1B-201ENST00000526991 GOLGA6L19H0YKK7 550 aa13.98□□□□□ -0.17
CHMP1B-201ENST00000526991 NPHP1O15259 732 aa13.98□□□□□ -0.17
CHMP1B-201ENST00000526991 CCDC144BQ3MJ40 725 aa13.98□□□□□ -0.17
CHMP1B-201ENST00000526991 SLC9C2Q5TAH2 1124 aa13.98□□□□□ -0.17
CHMP1B-201ENST00000526991 CHMP4CQ96CF2 233 aa13.98□□□□□ -0.17
CHMP1B-201ENST00000526991 ZSCAN16Q9H4T2 348 aaPredicted RBP13.98□□□□□ -0.17
CHMP1B-201ENST00000526991 CLIP2Q9UDT6 1046 aa13.98□□□□□ -0.17
CHMP1B-201ENST00000526991 RIPOR2Q9Y4F9 1068 aa13.98□□□□□ -0.17
CHMP1B-201ENST00000526991 DISP2A7MBM2 1401 aa13.98□□□□□ -0.17
CHMP1B-201ENST00000526991 FOXP2O15409 715 aa13.97□□□□□ -0.17
CHMP1B-201ENST00000526991 HMGB1P09429 215 aaKnown RBP13.97□□□□□ -0.17
CHMP1B-201ENST00000526991 ZNF75DP51815 510 aa13.97□□□□□ -0.17
CHMP1B-201ENST00000526991 ZNF592Q92610 1267 aa13.97□□□□□ -0.17
CHMP1B-201ENST00000526991 SDF4Q9BRK5 362 aa13.97□□□□□ -0.17
CHMP1B-201ENST00000526991 CLIC4Q9Y696 253 aa13.97□□□□□ -0.17
CHMP1B-201ENST00000526991 BECN2A8MW95 431 aa13.97□□□□□ -0.17
CHMP1B-201ENST00000526991 CPLX1O14810 134 aa13.97□□□□□ -0.17
CHMP1B-201ENST00000526991 KINO60870 393 aaKnown RBP13.97□□□□□ -0.17
CHMP1B-201ENST00000526991 BCAMP50895 628 aa13.97□□□□□ -0.17
CHMP1B-201ENST00000526991 EIF5P55010 431 aaKnown RBP13.97□□□□□ -0.17
CHMP1B-201ENST00000526991 SLC4A8Q2Y0W8 1093 aa13.97□□□□□ -0.17
CHMP1B-201ENST00000526991 LINC00116Q8NCU8 138 aa13.97□□□□□ -0.17
CHMP1B-201ENST00000526991 SPATA31A5Q5VU36 1347 aa13.97□□□□□ -0.17
CHMP1B-201ENST00000526991 SPATA31A7Q8IWB4 1347 aa13.97□□□□□ -0.17
CHMP1B-201ENST00000526991 DYNC1I1O14576 645 aa13.96□□□□□ -0.17
CHMP1B-201ENST00000526991 IL6STP40189 918 aaPredicted RBP13.96□□□□□ -0.17
CHMP1B-201ENST00000526991 IMMTQ16891 758 aaKnown RBP13.96□□□□□ -0.17
CHMP1B-201ENST00000526991 MYRIPQ8NFW9 859 aa13.96□□□□□ -0.17
CHMP1B-201ENST00000526991 ZBTB9Q96C00 473 aa13.96□□□□□ -0.17
CHMP1B-201ENST00000526991 MYL10Q9BUA6 226 aa13.96□□□□□ -0.17
CHMP1B-201ENST00000526991 PIH1D3Q9NQM4 214 aaKnown RBP13.96□□□□□ -0.17
CHMP1B-201ENST00000526991 WWC3Q9ULE0 1092 aa13.96□□□□□ -0.17
CHMP1B-201ENST00000526991 LAMB4A4D0S4 1761 aa13.96□□□□□ -0.17
CHMP1B-201ENST00000526991 GPAA1O43292 621 aa13.96□□□□□ -0.17
CHMP1B-201ENST00000526991 PDE8AO60658 829 aa13.96□□□□□ -0.17
CHMP1B-201ENST00000526991 CSF1RP07333 972 aa13.96□□□□□ -0.17
CHMP1B-201ENST00000526991 RALYLQ86SE5 291 aaKnown RBP13.96□□□□□ -0.17
CHMP1B-201ENST00000526991 ORC3Q9UBD5 711 aaPredicted RBP13.96□□□□□ -0.17
CHMP1B-201ENST00000526991 UBR2Q8IWV8 1755 aa13.96□□□□□ -0.17
CHMP1B-201ENST00000526991 UBE2Q2LH0YL09 131 aa13.96□□□□□ -0.18
CHMP1B-201ENST00000526991 MARCKSP29966 332 aaPredicted RBP13.96□□□□□ -0.18
CHMP1B-201ENST00000526991 TERF1P54274 439 aa13.96□□□□□ -0.18
CHMP1B-201ENST00000526991 COL16A1Q07092 1604 aaPredicted RBP13.96□□□□□ -0.18
CHMP1B-201ENST00000526991 TJP1Q07157 1748 aa13.96□□□□□ -0.18
CHMP1B-201ENST00000526991 CCDC102BQ68D86 513 aa13.96□□□□□ -0.18
CHMP1B-201ENST00000526991 MIGA1Q8NAN2 632 aa13.96□□□□□ -0.18
CHMP1B-201ENST00000526991 C8orf76Q96K31 380 aa13.96□□□□□ -0.18
CHMP1B-201ENST00000526991 SENP2Q9HC62 589 aa13.96□□□□□ -0.18
CHMP1B-201ENST00000526991 CARMIL3Q8ND23 1372 aa13.95□□□□□ -0.18
CHMP1B-201ENST00000526991 PATL2C9JE40 543 aaKnown RBP13.95□□□□□ -0.18
CHMP1B-201ENST00000526991 RIOK3O14730 519 aaKnown RBP13.95□□□□□ -0.18
CHMP1B-201ENST00000526991 HMGN5P82970 282 aaKnown RBP13.95□□□□□ -0.18
CHMP1B-201ENST00000526991 STK38Q15208 465 aa13.95□□□□□ -0.18
CHMP1B-201ENST00000526991 MEX3CQ5U5Q3 659 aaKnown RBP13.95□□□□□ -0.18
CHMP1B-201ENST00000526991 CACTINQ8WUQ7 758 aaKnown RBP13.95□□□□□ -0.18
CHMP1B-201ENST00000526991 PCDHA7Q9UN72 937 aa13.95□□□□□ -0.18
CHMP1B-201ENST00000526991 ABCC6O95255 1503 aa13.95□□□□□ -0.18
CHMP1B-201ENST00000526991 ERFEQ4G0M1 354 aa13.95□□□□□ -0.18
CHMP1B-201ENST00000526991 PPP4R3BQ5MIZ7 849 aa13.95□□□□□ -0.18
CHMP1B-201ENST00000526991 UTP14AQ9BVJ6 771 aaKnown RBP13.95□□□□□ -0.18
CHMP1B-201ENST00000526991 ABCF2Q9UG63 623 aa13.95□□□□□ -0.18
CHMP1B-201ENST00000526991 RCOR1Q9UKL0 485 aa13.95□□□□□ -0.18
CHMP1B-201ENST00000526991 ZNF213O14771 459 aa13.94□□□□□ -0.18
CHMP1B-201ENST00000526991 CAMTA2O94983 1202 aa13.94□□□□□ -0.18
CHMP1B-201ENST00000526991 PDE8BO95263 885 aa13.94□□□□□ -0.18
CHMP1B-201ENST00000526991 SNW1Q13573 536 aaKnown RBP13.94□□□□□ -0.18
CHMP1B-201ENST00000526991 CCDC82Q8N4S0 544 aa13.94□□□□□ -0.18
CHMP1B-201ENST00000526991 AOPEPQ8N6M6 819 aa13.94□□□□□ -0.18
CHMP1B-201ENST00000526991 PHKBQ93100 1093 aa13.94□□□□□ -0.18
CHMP1B-201ENST00000526991 LLPHQ9BRT6 129 aaKnown RBP13.94□□□□□ -0.18
CHMP1B-201ENST00000526991 AKAP2Q9Y2D5 859 aa13.94□□□□□ -0.18
CHMP1B-201ENST00000526991 SMIM22K7EJ46 135 aa13.94□□□□□ -0.18
CHMP1B-201ENST00000526991 NDUFA8P51970 172 aa13.94□□□□□ -0.18
CHMP1B-201ENST00000526991 ANTXR2P58335 489 aa13.94□□□□□ -0.18
CHMP1B-201ENST00000526991 TRIM28Q13263 835 aaKnown RBP13.94□□□□□ -0.18
CHMP1B-201ENST00000526991 NAA16Q6N069 864 aaPredicted RBP13.94□□□□□ -0.18
CHMP1B-201ENST00000526991 ZSCAN25Q6NSZ9 544 aa13.94□□□□□ -0.18
CHMP1B-201ENST00000526991 ZNF34Q8IZ26 560 aa13.94□□□□□ -0.18
CHMP1B-201ENST00000526991 ZNF396Q96N95 335 aaPredicted RBP13.94□□□□□ -0.18
CHMP1B-201ENST00000526991 TOMM22Q9NS69 142 aa13.94□□□□□ -0.18
CHMP1B-201ENST00000526991 TRMT1Q9NXH9 659 aaKnown RBP13.94□□□□□ -0.18
CHMP1B-201ENST00000526991 USP21Q9UK80 565 aa13.94□□□□□ -0.18
CHMP1B-201ENST00000526991 NUP188Q5SRE5 1749 aa13.94□□□□□ -0.18
CHMP1B-201ENST00000526991 GNPATO15228 680 aa13.94□□□□□ -0.18
CHMP1B-201ENST00000526991 TMED8Q6PL24 325 aaPredicted RBP13.94□□□□□ -0.18
CHMP1B-201ENST00000526991 MICU3Q86XE3 530 aa13.94□□□□□ -0.18
CHMP1B-201ENST00000526991 ZNF710Q8N1W2 664 aa13.94□□□□□ -0.18
CHMP1B-201ENST00000526991 SPTLC3Q9NUV7 552 aa13.94□□□□□ -0.18
CHMP1B-201ENST00000526991 MYH14Q7Z406 1995 aaKnown RBP13.94□□□□□ -0.18
CHMP1B-201ENST00000526991 KIF28PB7ZC32 967 aa13.93□□□□□ -0.18
CHMP1B-201ENST00000526991 CIAO1O76071 339 aa13.93□□□□□ -0.18
CHMP1B-201ENST00000526991 GYG1P46976 350 aa13.93□□□□□ -0.18
CHMP1B-201ENST00000526991 PTPN21Q16825 1174 aa13.93□□□□□ -0.18
CHMP1B-201ENST00000526991 KIF3AQ9Y496 699 aa13.93□□□□□ -0.18
CHMP1B-201ENST00000526991 DOT1LQ8TEK3 1739 aa13.93□□□□□ -0.18
CHMP1B-201ENST00000526991 B4E1Z4 1266 aa13.93□□□□□ -0.18
CHMP1B-201ENST00000526991 NAA30Q147X3 362 aaPredicted RBP13.93□□□□□ -0.18
CHMP1B-201ENST00000526991 GPR108Q9NPR9 543 aa13.93□□□□□ -0.18
CHMP1B-201ENST00000526991 RIC1Q4ADV7 1423 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms