RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 ATP10AO60312 1499 aa7.89□□□□□ -1.15
SVIP-202ENST00000525670 TMEM88BA6NKF7 163 aa7.89□□□□□ -1.15
SVIP-202ENST00000525670 ARTNQ5T4W7 220 aa7.89□□□□□ -1.15
SVIP-202ENST00000525670 GTF3C2Q8WUA4 911 aaPredicted RBP7.89□□□□□ -1.15
SVIP-202ENST00000525670 EDEM1Q92611 657 aa7.89□□□□□ -1.15
SVIP-202ENST00000525670 LACRTQ9GZZ8 138 aa7.89□□□□□ -1.15
SVIP-202ENST00000525670 ADAMTSL3P82987 1691 aa7.89□□□□□ -1.15
SVIP-202ENST00000525670 DNMT1P26358 1616 aaKnown RBP7.89□□□□□ -1.15
SVIP-202ENST00000525670 MAGI2Q86UL8 1455 aa7.88□□□□□ -1.15
SVIP-202ENST00000525670 MLH3Q9UHC1 1453 aa7.88□□□□□ -1.15
SVIP-202ENST00000525670 DNM1Q05193 864 aaKnown RBP7.88□□□□□ -1.15
SVIP-202ENST00000525670 GALNT11Q8NCW6 608 aa7.88□□□□□ -1.15
SVIP-202ENST00000525670 TTC16Q8NEE8 873 aa7.88□□□□□ -1.15
SVIP-202ENST00000525670 GGNBP2Q9H3C7 697 aa7.88□□□□□ -1.15
SVIP-202ENST00000525670 CNTN3Q9P232 1028 aa7.88□□□□□ -1.15
SVIP-202ENST00000525670 KIAA1107Q9UPP5 1409 aa7.87□□□□□ -1.15
SVIP-202ENST00000525670 PDGFAP04085 211 aa7.87□□□□□ -1.15
SVIP-202ENST00000525670 MZF1P28698 734 aaPredicted RBP7.87□□□□□ -1.15
SVIP-202ENST00000525670 EIF1AXP47813 144 aaKnown RBP7.87□□□□□ -1.15
SVIP-202ENST00000525670 ALKBH2Q6NS38 261 aa7.87□□□□□ -1.15
SVIP-202ENST00000525670 PRR23CQ6ZRP0 262 aa7.87□□□□□ -1.15
SVIP-202ENST00000525670 Q6ZS46 218 aa7.87□□□□□ -1.15
SVIP-202ENST00000525670 POP1Q99575 1024 aaKnown RBP7.87□□□□□ -1.15
SVIP-202ENST00000525670 ZFP64Q9NPA5 681 aa7.87□□□□□ -1.15
SVIP-202ENST00000525670 SALL4Q9UJQ4 1053 aa7.87□□□□□ -1.15
SVIP-202ENST00000525670 PLXNC1O60486 1568 aa7.87□□□□□ -1.15
SVIP-202ENST00000525670 A2MP01023 1474 aa7.87□□□□□ -1.15
SVIP-202ENST00000525670 DAPK1P53355 1430 aa7.86□□□□□ -1.15
SVIP-202ENST00000525670 MIA2Q96PC5 1412 aa7.86□□□□□ -1.15
SVIP-202ENST00000525670 CLTCQ00610 1675 aaKnown RBP7.86□□□□□ -1.15
SVIP-202ENST00000525670 FAM177BA6PVY3 158 aa7.86□□□□□ -1.15
SVIP-202ENST00000525670 PTPRAP18433 802 aa7.86□□□□□ -1.15
SVIP-202ENST00000525670 CES1P23141 567 aa7.86□□□□□ -1.15
SVIP-202ENST00000525670 MPSTP25325 297 aa7.86□□□□□ -1.15
SVIP-202ENST00000525670 CD68P34810 354 aaPredicted RBP7.86□□□□□ -1.15
SVIP-202ENST00000525670 C8orf34Q49A92 452 aa7.86□□□□□ -1.15
SVIP-202ENST00000525670 FAM117BQ6P1L5 589 aa7.86□□□□□ -1.15
SVIP-202ENST00000525670 SLC51AQ86UW1 340 aa7.86□□□□□ -1.15
SVIP-202ENST00000525670 C1orf127Q8N9H9 656 aa7.86□□□□□ -1.15
SVIP-202ENST00000525670 KLHL23Q8NBE8 558 aa7.86□□□□□ -1.15
SVIP-202ENST00000525670 PMEPA1Q969W9 287 aa7.86□□□□□ -1.15
SVIP-202ENST00000525670 ADAM19Q9H013 955 aa7.86□□□□□ -1.15
SVIP-202ENST00000525670 KANSL3Q9P2N6 904 aa7.86□□□□□ -1.15
SVIP-202ENST00000525670 TCOF1Q13428 1488 aaKnown RBP7.86□□□□□ -1.15
SVIP-202ENST00000525670 ABCC5O15440 1437 aa7.86□□□□□ -1.15
SVIP-202ENST00000525670 FSCN2O14926 492 aa7.85□□□□□ -1.15
SVIP-202ENST00000525670 NPR3P17342 541 aa7.85□□□□□ -1.15
SVIP-202ENST00000525670 TXNDC11Q6PKC3 985 aa7.85□□□□□ -1.15
SVIP-202ENST00000525670 ADAMTSL4Q6UY14 1074 aa7.85□□□□□ -1.15
SVIP-202ENST00000525670 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.85□□□□□ -1.15
SVIP-202ENST00000525670 C1orf115Q9H7X2 142 aa7.85□□□□□ -1.15
SVIP-202ENST00000525670 SH2B1Q9NRF2 756 aaPredicted RBP7.85□□□□□ -1.15
SVIP-202ENST00000525670 REREQ9P2R6 1566 aa7.84□□□□□ -1.15
SVIP-202ENST00000525670 MAST1Q9Y2H9 1570 aa7.84□□□□□ -1.15
SVIP-202ENST00000525670 PTPRMP28827 1452 aa7.84□□□□□ -1.15
SVIP-202ENST00000525670 TM4SF5O14894 197 aa7.84□□□□□ -1.15
SVIP-202ENST00000525670 GLB1P16278 677 aa7.84□□□□□ -1.15
SVIP-202ENST00000525670 EPHA1P21709 976 aa7.84□□□□□ -1.15
SVIP-202ENST00000525670 CDC25BP30305 580 aa7.84□□□□□ -1.15
SVIP-202ENST00000525670 AGGF1Q8N302 714 aaeCLIP7.84□□□□□ -1.15
SVIP-202ENST00000525670 MTMR7Q9Y216 660 aa7.84□□□□□ -1.15
SVIP-202ENST00000525670 CEP152O94986 1710 aa7.83□□□□□ -1.16
SVIP-202ENST00000525670 C3P01024 1663 aa7.83□□□□□ -1.16
SVIP-202ENST00000525670 CEBPAP49715 358 aaPredicted RBP7.83□□□□□ -1.16
SVIP-202ENST00000525670 LRP8Q14114 963 aa7.83□□□□□ -1.16
SVIP-202ENST00000525670 GGT6Q6P531 493 aa7.83□□□□□ -1.16
SVIP-202ENST00000525670 RRP7BPQ9NSQ0 103 aa7.83□□□□□ -1.16
SVIP-202ENST00000525670 KCNK4Q9NYG8 393 aa7.83□□□□□ -1.16
SVIP-202ENST00000525670 RNF112Q9ULX5 631 aa7.83□□□□□ -1.16
SVIP-202ENST00000525670 POLIQ9UNA4 740 aa7.83□□□□□ -1.16
SVIP-202ENST00000525670 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.83□□□□□ -1.16
SVIP-202ENST00000525670 KIF15Q9NS87 1388 aa7.83□□□□□ -1.16
SVIP-202ENST00000525670 SHANK2Q9UPX8 1470 aa7.82□□□□□ -1.16
SVIP-202ENST00000525670 A6NHS1 94 aa7.82□□□□□ -1.16
SVIP-202ENST00000525670 NFKBIEO00221 500 aa7.82□□□□□ -1.16
SVIP-202ENST00000525670 FAM13AO94988 1023 aa7.82□□□□□ -1.16
SVIP-202ENST00000525670 WISP1O95388 367 aa7.82□□□□□ -1.16
SVIP-202ENST00000525670 TSPY4P0CV99 314 aa7.82□□□□□ -1.16
SVIP-202ENST00000525670 TSPY10P0CW01 314 aa7.82□□□□□ -1.16
SVIP-202ENST00000525670 CABP4P57796 275 aa7.82□□□□□ -1.16
SVIP-202ENST00000525670 MTMR3Q13615 1198 aa7.82□□□□□ -1.16
SVIP-202ENST00000525670 AAMPQ13685 434 aa7.82□□□□□ -1.16
SVIP-202ENST00000525670 PTPRKQ15262 1439 aa7.82□□□□□ -1.16
SVIP-202ENST00000525670 PHLDB3Q6NSJ2 640 aa7.82□□□□□ -1.16
SVIP-202ENST00000525670 WNT8BQ93098 351 aa7.82□□□□□ -1.16
SVIP-202ENST00000525670 UBL7Q96S82 380 aaPredicted RBP7.82□□□□□ -1.16
SVIP-202ENST00000525670 CARD10Q9BWT7 1032 aa7.82□□□□□ -1.16
SVIP-202ENST00000525670 CHRDQ9H2X0 955 aa7.82□□□□□ -1.16
SVIP-202ENST00000525670 SEC31BQ9NQW1 1179 aa7.82□□□□□ -1.16
SVIP-202ENST00000525670 DZANK1Q9NVP4 752 aa7.82□□□□□ -1.16
SVIP-202ENST00000525670 PDE2AO00408 941 aaPredicted RBP7.81□□□□□ -1.16
SVIP-202ENST00000525670 KIF3BO15066 747 aa7.81□□□□□ -1.16
SVIP-202ENST00000525670 HYAL3O43820 417 aaPredicted RBP7.81□□□□□ -1.16
SVIP-202ENST00000525670 SF3B2Q13435 895 aaKnown RBP7.81□□□□□ -1.16
SVIP-202ENST00000525670 DUOXA2Q1HG44 320 aa7.81□□□□□ -1.16
SVIP-202ENST00000525670 ACAD11Q709F0 780 aa7.81□□□□□ -1.16
SVIP-202ENST00000525670 NBPF11Q86T75 865 aa7.81□□□□□ -1.16
SVIP-202ENST00000525670 CEP41Q9BYV8 373 aa7.81□□□□□ -1.16
SVIP-202ENST00000525670 AGLP35573 1532 aa7.81□□□□□ -1.16
SVIP-202ENST00000525670 RTEL1-TNFRSF6BF6WH68 1400 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms