RNA–Protein interactions for RNA: ENST00000524556.1

CSTF3-204, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3

Gene CSTF3, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-204ENST00000524556 BRI3BPQ8WY22 251 aa18.67■□□□□ 0.58
CSTF3-204ENST00000524556 TMEM106CQ9BVX2 250 aa18.67■□□□□ 0.58
CSTF3-204ENST00000524556 GRM8O00222 908 aa18.66■□□□□ 0.58
CSTF3-204ENST00000524556 GYG1P46976 350 aa18.66■□□□□ 0.58
CSTF3-204ENST00000524556 GTF2A2P52657 109 aa18.66■□□□□ 0.58
CSTF3-204ENST00000524556 MAP3K9P80192 1104 aa18.66■□□□□ 0.58
CSTF3-204ENST00000524556 CNKSR2Q8WXI2 1034 aa18.66■□□□□ 0.58
CSTF3-204ENST00000524556 ZNF333Q96JL9 665 aa18.66■□□□□ 0.58
CSTF3-204ENST00000524556 FAM84BQ96KN1 310 aaPredicted RBP18.66■□□□□ 0.58
CSTF3-204ENST00000524556 ZFYVE28Q9HCC9 887 aa18.66■□□□□ 0.58
CSTF3-204ENST00000524556 CCL15-CCL14A0A0B4J2E2 113 aa18.65■□□□□ 0.58
CSTF3-204ENST00000524556 TCP10L2B9ZVM9 353 aa18.65■□□□□ 0.58
CSTF3-204ENST00000524556 CRKP46108 304 aa18.65■□□□□ 0.58
CSTF3-204ENST00000524556 EXOSC9Q06265 439 aaKnown RBP18.65■□□□□ 0.58
CSTF3-204ENST00000524556 VGLL4Q14135 290 aa18.65■□□□□ 0.58
CSTF3-204ENST00000524556 TAF1CQ15572 869 aaPredicted RBP18.65■□□□□ 0.58
CSTF3-204ENST00000524556 CCL15Q16663 113 aa18.65■□□□□ 0.58
CSTF3-204ENST00000524556 NBPF11Q86T75 865 aa18.65■□□□□ 0.58
CSTF3-204ENST00000524556 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.65■□□□□ 0.58
CSTF3-204ENST00000524556 TMEM39BQ9GZU3 492 aa18.65■□□□□ 0.58
CSTF3-204ENST00000524556 TNNI2P48788 182 aa18.64■□□□□ 0.57
CSTF3-204ENST00000524556 WDR63Q8IWG1 891 aa18.64■□□□□ 0.57
CSTF3-204ENST00000524556 CSADQ9Y600 493 aa18.64■□□□□ 0.57
CSTF3-204ENST00000524556 PTCH2Q9Y6C5 1203 aa18.64■□□□□ 0.57
CSTF3-204ENST00000524556 SLC9C1Q4G0N8 1177 aa18.63■□□□□ 0.57
CSTF3-204ENST00000524556 FAM43AQ8N2R8 423 aa18.63■□□□□ 0.57
CSTF3-204ENST00000524556 C9orf78Q9NZ63 289 aaPredicted RBP18.63■□□□□ 0.57
CSTF3-204ENST00000524556 OTUD5Q96G74 571 aa18.62■□□□□ 0.57
CSTF3-204ENST00000524556 PUS3Q9BZE2 481 aaKnown RBP18.62■□□□□ 0.57
CSTF3-204ENST00000524556 ALDH1L1O75891 902 aa18.61■□□□□ 0.57
CSTF3-204ENST00000524556 FXR1P51114 621 aaKnown RBP eCLIP18.61■□□□□ 0.57
CSTF3-204ENST00000524556 HDLBPQ00341 1268 aaKnown RBP18.61■□□□□ 0.57
CSTF3-204ENST00000524556 GRIK5Q16478 980 aa18.61■□□□□ 0.57
CSTF3-204ENST00000524556 FBXO33Q7Z6M2 555 aa18.61■□□□□ 0.57
CSTF3-204ENST00000524556 RIPOR2Q9Y4F9 1068 aa18.61■□□□□ 0.57
CSTF3-204ENST00000524556 CEP290O15078 2479 aa18.6■□□□□ 0.57
CSTF3-204ENST00000524556 MROH5Q6ZUA9 1318 aa18.6■□□□□ 0.57
CSTF3-204ENST00000524556 SPDYE5A6NIY4 337 aa18.6■□□□□ 0.57
CSTF3-204ENST00000524556 WDHD1O75717 1129 aaPredicted RBP18.6■□□□□ 0.57
CSTF3-204ENST00000524556 SLC4A8Q2Y0W8 1093 aa18.6■□□□□ 0.57
CSTF3-204ENST00000524556 KAZALD1Q96I82 304 aa18.6■□□□□ 0.57
CSTF3-204ENST00000524556 ZCCHC17Q9NP64 241 aaKnown RBP18.6■□□□□ 0.57
CSTF3-204ENST00000524556 ZSWIM8A7E2V4 1837 aa18.6■□□□□ 0.57
CSTF3-204ENST00000524556 TLR2O60603 784 aa18.59■□□□□ 0.57
CSTF3-204ENST00000524556 CETPP11597 493 aa18.59■□□□□ 0.57
CSTF3-204ENST00000524556 VPS37DQ86XT2 251 aa18.59■□□□□ 0.57
CSTF3-204ENST00000524556 ERO1BQ86YB8 467 aa18.59■□□□□ 0.57
CSTF3-204ENST00000524556 TBC1D22AQ8WUA7 517 aa18.59■□□□□ 0.57
CSTF3-204ENST00000524556 SUCLG2Q96I99 432 aa18.59■□□□□ 0.57
CSTF3-204ENST00000524556 SALL2Q9Y467 1007 aaPredicted RBP18.59■□□□□ 0.57
CSTF3-204ENST00000524556 SNCAIPQ9Y6H5 919 aa18.59■□□□□ 0.57
CSTF3-204ENST00000524556 CACNB3P54284 484 aa18.58■□□□□ 0.56
CSTF3-204ENST00000524556 LACTBP83111 547 aaPredicted RBP18.58■□□□□ 0.56
CSTF3-204ENST00000524556 CHAF1AQ13111 956 aaPredicted RBP18.58■□□□□ 0.56
CSTF3-204ENST00000524556 KIF22Q14807 665 aa18.58■□□□□ 0.56
CSTF3-204ENST00000524556 SLC4A10Q6U841 1118 aa18.58■□□□□ 0.56
CSTF3-204ENST00000524556 TEKT1Q969V4 418 aa18.58■□□□□ 0.56
CSTF3-204ENST00000524556 ARHGAP39Q9C0H5 1083 aa18.58■□□□□ 0.56
CSTF3-204ENST00000524556 SRCIN1Q9C0H9 1055 aa18.58■□□□□ 0.56
CSTF3-204ENST00000524556 IQSEC3Q9UPP2 1182 aaPredicted RBP18.58■□□□□ 0.56
CSTF3-204ENST00000524556 COLQQ9Y215 455 aaPredicted RBP18.58■□□□□ 0.56
CSTF3-204ENST00000524556 BTBD19C9JJ37 291 aa18.57■□□□□ 0.56
CSTF3-204ENST00000524556 FAM83AQ86UY5 434 aa18.57■□□□□ 0.56
CSTF3-204ENST00000524556 SH3TC2Q8TF17 1288 aa18.57■□□□□ 0.56
CSTF3-204ENST00000524556 ZKSCAN4Q969J2 545 aaPredicted RBP18.57■□□□□ 0.56
CSTF3-204ENST00000524556 WRNIP1Q96S55 665 aa18.57■□□□□ 0.56
CSTF3-204ENST00000524556 MRIQ9BWK5 157 aa18.57■□□□□ 0.56
CSTF3-204ENST00000524556 IRF6O14896 467 aa18.56■□□□□ 0.56
CSTF3-204ENST00000524556 FRAT2O75474 233 aaPredicted RBP18.56■□□□□ 0.56
CSTF3-204ENST00000524556 MYCP01106 439 aaPredicted RBP18.56■□□□□ 0.56
CSTF3-204ENST00000524556 GNRH1P01148 92 aa18.56■□□□□ 0.56
CSTF3-204ENST00000524556 SNAPC2Q13487 334 aa18.56■□□□□ 0.56
CSTF3-204ENST00000524556 CAVIN4Q5BKX8 364 aa18.56■□□□□ 0.56
CSTF3-204ENST00000524556 FKBP1CQ5VVH2 108 aa18.56■□□□□ 0.56
CSTF3-204ENST00000524556 HOOK2Q96ED9 719 aa18.56■□□□□ 0.56
CSTF3-204ENST00000524556 ZDHHC15Q96MV8 337 aa18.56■□□□□ 0.56
CSTF3-204ENST00000524556 SPINK5Q9NQ38 1064 aaPredicted RBP18.56■□□□□ 0.56
CSTF3-204ENST00000524556 TMOD2Q9NZR1 351 aa18.56■□□□□ 0.56
CSTF3-204ENST00000524556 NBPF7P0C2Y1 421 aaPredicted RBP18.55■□□□□ 0.56
CSTF3-204ENST00000524556 PRMT2P55345 433 aa18.55■□□□□ 0.56
CSTF3-204ENST00000524556 PPIL2Q13356 520 aa18.55■□□□□ 0.56
CSTF3-204ENST00000524556 LRRC24Q50LG9 513 aa18.55■□□□□ 0.56
CSTF3-204ENST00000524556 UTYO14607 1347 aa18.54■□□□□ 0.56
CSTF3-204ENST00000524556 METTL24Q5JXM2 366 aa18.54■□□□□ 0.56
CSTF3-204ENST00000524556 APOBEC3HQ6NTF7 200 aaKnown RBP18.54■□□□□ 0.56
CSTF3-204ENST00000524556 VGLL2Q8N8G2 317 aa18.54■□□□□ 0.56
CSTF3-204ENST00000524556 SZT2Q5T011 3432 aa18.54■□□□□ 0.56
CSTF3-204ENST00000524556 TRIOBPQ9H2D6 2365 aa18.54■□□□□ 0.56
CSTF3-204ENST00000524556 H0YGN5 161 aa18.53■□□□□ 0.56
CSTF3-204ENST00000524556 PDE8BO95263 885 aa18.53■□□□□ 0.56
CSTF3-204ENST00000524556 BCAMP50895 628 aa18.53■□□□□ 0.56
CSTF3-204ENST00000524556 PPATQ06203 517 aa18.53■□□□□ 0.56
CSTF3-204ENST00000524556 RABL6Q3YEC7 729 aaPredicted RBP18.53■□□□□ 0.56
CSTF3-204ENST00000524556 DCAF15Q66K64 600 aa18.53■□□□□ 0.56
CSTF3-204ENST00000524556 HHIPL2Q6UWX4 724 aa18.53■□□□□ 0.56
CSTF3-204ENST00000524556 C17orf99Q6UX52 265 aa18.53■□□□□ 0.56
CSTF3-204ENST00000524556 BICC1Q9H694 974 aaKnown RBP18.53■□□□□ 0.56
CSTF3-204ENST00000524556 MRS2Q9HD23 443 aa18.53■□□□□ 0.56
CSTF3-204ENST00000524556 SUGT1Q9Y2Z0 365 aa18.53■□□□□ 0.56
CSTF3-204ENST00000524556 MAST3O60307 1309 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms