RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 ALDH1L1O75891 902 aa32.75■■■□□ 2.83
PVT1-219ENST00000523427 VPS37DQ86XT2 251 aa32.75■■■□□ 2.83
PVT1-219ENST00000523427 GRIK5Q16478 980 aa32.74■■■□□ 2.83
PVT1-219ENST00000523427 TESPA1A2RU30 521 aaPredicted RBP32.73■■■□□ 2.83
PVT1-219ENST00000523427 FRAT2O75474 233 aaPredicted RBP32.73■■■□□ 2.83
PVT1-219ENST00000523427 CAP1Q01518 475 aa32.73■■■□□ 2.83
PVT1-219ENST00000523427 PPP1R3FQ6ZSY5 799 aaPredicted RBP32.73■■■□□ 2.83
PVT1-219ENST00000523427 TEPSINQ96N21 525 aa32.73■■■□□ 2.83
PVT1-219ENST00000523427 TNNI2P48788 182 aa32.72■■■□□ 2.83
PVT1-219ENST00000523427 CACNB3P54284 484 aa32.72■■■□□ 2.83
PVT1-219ENST00000523427 MS4A4AQ96JQ5 239 aa32.72■■■□□ 2.83
PVT1-219ENST00000523427 CCL15-CCL14A0A0B4J2E2 113 aa32.71■■■□□ 2.83
PVT1-219ENST00000523427 NBPF7P0C2Y1 421 aaPredicted RBP32.71■■■□□ 2.83
PVT1-219ENST00000523427 MAP3K9P80192 1104 aa32.71■■■□□ 2.83
PVT1-219ENST00000523427 VGLL4Q14135 290 aa32.71■■■□□ 2.83
PVT1-219ENST00000523427 CCL15Q16663 113 aa32.71■■■□□ 2.83
PVT1-219ENST00000523427 BRI3BPQ8WY22 251 aa32.71■■■□□ 2.83
PVT1-219ENST00000523427 OTUD5Q96G74 571 aa32.71■■■□□ 2.83
PVT1-219ENST00000523427 KAZALD1Q96I82 304 aa32.71■■■□□ 2.83
PVT1-219ENST00000523427 KIAA0100Q14667 2235 aaKnown RBP32.7■■■□□ 2.83
PVT1-219ENST00000523427 EN2P19622 333 aaPredicted RBP32.7■■■□□ 2.83
PVT1-219ENST00000523427 TAF1CQ15572 869 aaPredicted RBP32.7■■■□□ 2.83
PVT1-219ENST00000523427 RIPOR2Q9Y4F9 1068 aa32.7■■■□□ 2.83
PVT1-219ENST00000523427 CSADQ9Y600 493 aa32.7■■■□□ 2.83
PVT1-219ENST00000523427 HTTP42858 3142 aa32.69■■■□□ 2.82
PVT1-219ENST00000523427 ANP32CO43423 234 aa32.68■■■□□ 2.82
PVT1-219ENST00000523427 LRRC24Q50LG9 513 aa32.68■■■□□ 2.82
PVT1-219ENST00000523427 METTL24Q5JXM2 366 aa32.68■■■□□ 2.82
PVT1-219ENST00000523427 ZFYVE28Q9HCC9 887 aa32.68■■■□□ 2.82
PVT1-219ENST00000523427 MROH5Q6ZUA9 1318 aa32.68■■■□□ 2.82
PVT1-219ENST00000523427 MYCP01106 439 aaPredicted RBP32.67■■■□□ 2.82
PVT1-219ENST00000523427 GTF2A2P52657 109 aa32.67■■■□□ 2.82
PVT1-219ENST00000523427 BICC1Q9H694 974 aaKnown RBP32.67■■■□□ 2.82
PVT1-219ENST00000523427 OTOFQ9HC10 1997 aa32.67■■■□□ 2.82
PVT1-219ENST00000523427 CAVIN4Q5BKX8 364 aa32.66■■■□□ 2.82
PVT1-219ENST00000523427 FBXO33Q7Z6M2 555 aa32.66■■■□□ 2.82
PVT1-219ENST00000523427 FAM9BQ8IZU0 186 aa32.66■■■□□ 2.82
PVT1-219ENST00000523427 FAM43AQ8N2R8 423 aa32.66■■■□□ 2.82
PVT1-219ENST00000523427 DDX55Q8NHQ9 600 aaKnown RBP eCLIP32.66■■■□□ 2.82
PVT1-219ENST00000523427 ARMC5Q96C12 935 aa32.66■■■□□ 2.82
PVT1-219ENST00000523427 GCC1Q96CN9 775 aa32.66■■■□□ 2.82
PVT1-219ENST00000523427 TMEM106CQ9BVX2 250 aa32.65■■■□□ 2.82
PVT1-219ENST00000523427 TEKT1Q969V4 418 aa32.64■■■□□ 2.82
PVT1-219ENST00000523427 ECM2O94769 699 aaPredicted RBP32.63■■■□□ 2.81
PVT1-219ENST00000523427 KLHDC4Q8TBB5 520 aa32.63■■■□□ 2.81
PVT1-219ENST00000523427 PTCH2Q9Y6C5 1203 aa32.63■■■□□ 2.81
PVT1-219ENST00000523427 BCAMP50895 628 aa32.62■■■□□ 2.81
PVT1-219ENST00000523427 ARHGEF6Q15052 776 aa32.62■■■□□ 2.81
PVT1-219ENST00000523427 TBC1D22AQ8WUA7 517 aa32.62■■■□□ 2.81
PVT1-219ENST00000523427 TMOD2Q9NZR1 351 aa32.62■■■□□ 2.81
PVT1-219ENST00000523427 LAMB1P07942 1786 aa32.62■■■□□ 2.81
PVT1-219ENST00000523427 SLC9C1Q4G0N8 1177 aa32.61■■■□□ 2.81
PVT1-219ENST00000523427 ZKSCAN4Q969J2 545 aaPredicted RBP32.61■■■□□ 2.81
PVT1-219ENST00000523427 WRNIP1Q96S55 665 aa32.61■■■□□ 2.81
PVT1-219ENST00000523427 CENPFP49454 3210 aa32.6■■■□□ 2.81
PVT1-219ENST00000523427 ANKRD44Q8N8A2 993 aa32.6■■■□□ 2.81
PVT1-219ENST00000523427 PDE8BO95263 885 aa32.59■■■□□ 2.81
PVT1-219ENST00000523427 HDLBPQ00341 1268 aaKnown RBP32.59■■■□□ 2.81
PVT1-219ENST00000523427 SLC4A8Q2Y0W8 1093 aa32.59■■■□□ 2.81
PVT1-219ENST00000523427 HABP4Q5JVS0 413 aaKnown RBP32.59■■■□□ 2.81
PVT1-219ENST00000523427 SNCAIPQ9Y6H5 919 aa32.59■■■□□ 2.81
PVT1-219ENST00000523427 MKI67P46013 3256 aaKnown RBP32.58■■■□□ 2.81
PVT1-219ENST00000523427 SPDYE5A6NIY4 337 aa32.58■■■□□ 2.81
PVT1-219ENST00000523427 WDHD1O75717 1129 aaPredicted RBP32.58■■■□□ 2.81
PVT1-219ENST00000523427 NBPF11Q86T75 865 aa32.58■■■□□ 2.81
PVT1-219ENST00000523427 ZNF333Q96JL9 665 aa32.58■■■□□ 2.81
PVT1-219ENST00000523427 UTYO14607 1347 aa32.57■■■□□ 2.8
PVT1-219ENST00000523427 RABL6Q3YEC7 729 aaPredicted RBP32.57■■■□□ 2.8
PVT1-219ENST00000523427 CETPP11597 493 aa32.56■■■□□ 2.8
PVT1-219ENST00000523427 MIGA2Q7L4E1 593 aa32.56■■■□□ 2.8
PVT1-219ENST00000523427 ERO1BQ86YB8 467 aa32.56■■■□□ 2.8
PVT1-219ENST00000523427 ZDHHC15Q96MV8 337 aa32.56■■■□□ 2.8
PVT1-219ENST00000523427 ARHGAP39Q9C0H5 1083 aa32.56■■■□□ 2.8
PVT1-219ENST00000523427 ARAP2Q8WZ64 1704 aa32.56■■■□□ 2.8
PVT1-219ENST00000523427 IRF6O14896 467 aa32.55■■■□□ 2.8
PVT1-219ENST00000523427 APOBEC3HQ6NTF7 200 aaKnown RBP32.55■■■□□ 2.8
PVT1-219ENST00000523427 VGLL2Q8N8G2 317 aa32.55■■■□□ 2.8
PVT1-219ENST00000523427 BTBD19C9JJ37 291 aa32.54■■■□□ 2.8
PVT1-219ENST00000523427 KIF22Q14807 665 aa32.54■■■□□ 2.8
PVT1-219ENST00000523427 MRPL50Q8N5N7 158 aaKnown RBP32.54■■■□□ 2.8
PVT1-219ENST00000523427 SH3TC2Q8TF17 1288 aa32.54■■■□□ 2.8
PVT1-219ENST00000523427 IFIT1P09914 478 aaKnown RBP32.53■■■□□ 2.8
PVT1-219ENST00000523427 SNAPC2Q13487 334 aa32.53■■■□□ 2.8
PVT1-219ENST00000523427 TLR2O60603 784 aa32.52■■■□□ 2.8
PVT1-219ENST00000523427 FAM83AQ86UY5 434 aa32.52■■■□□ 2.8
PVT1-219ENST00000523427 HOOK2Q96ED9 719 aa32.51■■■□□ 2.79
PVT1-219ENST00000523427 MAST3O60307 1309 aa32.51■■■□□ 2.79
PVT1-219ENST00000523427 PUM3Q15397 648 aaKnown RBP32.5■■■□□ 2.79
PVT1-219ENST00000523427 DCAF15Q66K64 600 aa32.5■■■□□ 2.79
PVT1-219ENST00000523427 INPP5BP32019 993 aa32.49■■■□□ 2.79
PVT1-219ENST00000523427 ZEB1P37275 1124 aaPredicted RBP32.49■■■□□ 2.79
PVT1-219ENST00000523427 LACTBP83111 547 aaPredicted RBP32.49■■■□□ 2.79
PVT1-219ENST00000523427 TCP10Q12799 353 aa32.49■■■□□ 2.79
PVT1-219ENST00000523427 PPIL2Q13356 520 aa32.49■■■□□ 2.79
PVT1-219ENST00000523427 GOLGA6L2Q8N9W4 650 aaPredicted RBP32.49■■■□□ 2.79
PVT1-219ENST00000523427 MRIQ9BWK5 157 aa32.49■■■□□ 2.79
PVT1-219ENST00000523427 ZNF341Q9BYN7 854 aa32.49■■■□□ 2.79
PVT1-219ENST00000523427 RBBP6Q7Z6E9 1792 aaKnown RBP32.49■■■□□ 2.79
PVT1-219ENST00000523427 FKBP1CQ5VVH2 108 aa32.48■■■□□ 2.79
PVT1-219ENST00000523427 USP44Q9H0E7 712 aa32.48■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms