RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 BPIFA3Q9BQP9 254 aa13.76□□□□□ -0.21
SPIDR-217ENST00000522117 KIF9Q9HAQ2 790 aa13.76□□□□□ -0.21
SPIDR-217ENST00000522117 KLC4Q9NSK0 619 aa13.76□□□□□ -0.21
SPIDR-217ENST00000522117 A0A1B0GUA9 196 aa13.76□□□□□ -0.21
SPIDR-217ENST00000522117 GOLGA6L9A6NEM1 432 aa13.76□□□□□ -0.21
SPIDR-217ENST00000522117 TRAF1Q13077 416 aa13.76□□□□□ -0.21
SPIDR-217ENST00000522117 NUTM1Q86Y26 1132 aa13.76□□□□□ -0.21
SPIDR-217ENST00000522117 KIRREL3Q8IZU9 778 aa13.76□□□□□ -0.21
SPIDR-217ENST00000522117 PARD3BQ8TEW8 1205 aa13.76□□□□□ -0.21
SPIDR-217ENST00000522117 GBP3Q9H0R5 595 aa13.76□□□□□ -0.21
SPIDR-217ENST00000522117 ZSWIM6Q9HCJ5 1215 aa13.76□□□□□ -0.21
SPIDR-217ENST00000522117 GRIN2DO15399 1336 aa13.75□□□□□ -0.21
SPIDR-217ENST00000522117 ARHGAP6O43182 974 aa13.75□□□□□ -0.21
SPIDR-217ENST00000522117 RHOXF2BP0C7M4 288 aa13.75□□□□□ -0.21
SPIDR-217ENST00000522117 IBSPP21815 317 aaPredicted RBP13.75□□□□□ -0.21
SPIDR-217ENST00000522117 RESTQ13127 1097 aa13.75□□□□□ -0.21
SPIDR-217ENST00000522117 NCAPHQ15003 741 aa13.75□□□□□ -0.21
SPIDR-217ENST00000522117 BCAS4Q8TDM0 211 aa13.75□□□□□ -0.21
SPIDR-217ENST00000522117 CCDC12Q8WUD4 166 aaPredicted RBP13.75□□□□□ -0.21
SPIDR-217ENST00000522117 SMARCC1Q92922 1105 aaPredicted RBP13.75□□□□□ -0.21
SPIDR-217ENST00000522117 JAKMIP1Q96N16 626 aaKnown RBP13.75□□□□□ -0.21
SPIDR-217ENST00000522117 RHOXF2Q9BQY4 288 aa13.75□□□□□ -0.21
SPIDR-217ENST00000522117 LRRCC1Q9C099 1032 aa13.75□□□□□ -0.21
SPIDR-217ENST00000522117 KDM4CQ9H3R0 1056 aa13.75□□□□□ -0.21
SPIDR-217ENST00000522117 CDCA2Q69YH5 1023 aaPredicted RBP13.75□□□□□ -0.21
SPIDR-217ENST00000522117 RABEP2Q9H5N1 569 aa13.75□□□□□ -0.21
SPIDR-217ENST00000522117 CPSF2Q9P2I0 782 aaKnown RBP13.75□□□□□ -0.21
SPIDR-217ENST00000522117 CLTCQ00610 1675 aaKnown RBP13.74□□□□□ -0.21
SPIDR-217ENST00000522117 RASSF9O75901 435 aa13.74□□□□□ -0.21
SPIDR-217ENST00000522117 SNUPNO95149 360 aaKnown RBP13.74□□□□□ -0.21
SPIDR-217ENST00000522117 RPS6KA3P51812 740 aa13.74□□□□□ -0.21
SPIDR-217ENST00000522117 FANCCQ00597 558 aa13.74□□□□□ -0.21
SPIDR-217ENST00000522117 DPCR1Q3MIW9 517 aa13.74□□□□□ -0.21
SPIDR-217ENST00000522117 TOGARAM2Q6ZUX3 1019 aa13.74□□□□□ -0.21
SPIDR-217ENST00000522117 RIN2Q8WYP3 895 aaPredicted RBP13.74□□□□□ -0.21
SPIDR-217ENST00000522117 SAMM50Q9Y512 469 aa13.74□□□□□ -0.21
SPIDR-217ENST00000522117 TMEM131LA2VDJ0 1609 aa13.74□□□□□ -0.21
SPIDR-217ENST00000522117 COQ9O75208 318 aa13.74□□□□□ -0.21
SPIDR-217ENST00000522117 GCKP35557 465 aa13.74□□□□□ -0.21
SPIDR-217ENST00000522117 CDC23Q9UJX2 597 aa13.74□□□□□ -0.21
SPIDR-217ENST00000522117 HPCAL4Q9UM19 191 aa13.74□□□□□ -0.21
SPIDR-217ENST00000522117 AGLP35573 1532 aa13.73□□□□□ -0.21
SPIDR-217ENST00000522117 EIF3HO15372 352 aaKnown RBP eCLIP13.73□□□□□ -0.213e-7■□□□□ 10.4
SPIDR-217ENST00000522117 KINO60870 393 aaKnown RBP13.73□□□□□ -0.21
SPIDR-217ENST00000522117 SF3A1Q15459 793 aaKnown RBP13.73□□□□□ -0.21
SPIDR-217ENST00000522117 DPF2Q92785 391 aa13.73□□□□□ -0.21
SPIDR-217ENST00000522117 TM6SF1Q9BZW5 370 aa13.73□□□□□ -0.21
SPIDR-217ENST00000522117 SHTN1A0MZ66 631 aa13.73□□□□□ -0.21
SPIDR-217ENST00000522117 MAP4K4O95819 1239 aaPredicted RBP13.73□□□□□ -0.21
SPIDR-217ENST00000522117 SMTNP53814 917 aa13.73□□□□□ -0.21
SPIDR-217ENST00000522117 TBC1D25Q3MII6 688 aa13.73□□□□□ -0.21
SPIDR-217ENST00000522117 IRX2Q9BZI1 471 aaPredicted RBP13.73□□□□□ -0.21
SPIDR-217ENST00000522117 HSD3B7Q9H2F3 369 aa13.73□□□□□ -0.21
SPIDR-217ENST00000522117 CYP46A1Q9Y6A2 500 aa13.73□□□□□ -0.21
SPIDR-217ENST00000522117 DIAPH1O60610 1272 aaKnown RBP13.72□□□□□ -0.21
SPIDR-217ENST00000522117 FCHSD2O94868 740 aa13.72□□□□□ -0.21
SPIDR-217ENST00000522117 ZNF202O95125 648 aa13.72□□□□□ -0.21
SPIDR-217ENST00000522117 PRKAR2BP31323 418 aa13.72□□□□□ -0.21
SPIDR-217ENST00000522117 SNX1Q13596 522 aa13.72□□□□□ -0.21
SPIDR-217ENST00000522117 NFE2L2Q16236 605 aa13.72□□□□□ -0.21
SPIDR-217ENST00000522117 SLC5A9Q2M3M2 681 aa13.72□□□□□ -0.21
SPIDR-217ENST00000522117 CEP85LQ5SZL2 805 aa13.72□□□□□ -0.21
SPIDR-217ENST00000522117 FAM228AQ86W67 206 aa13.72□□□□□ -0.21
SPIDR-217ENST00000522117 KCTD17Q8N5Z5 321 aa13.72□□□□□ -0.21
SPIDR-217ENST00000522117 AOX1Q06278 1338 aa13.72□□□□□ -0.21
SPIDR-217ENST00000522117 MEFVO15553 781 aaPredicted RBP13.72□□□□□ -0.21
SPIDR-217ENST00000522117 ADD1P35611 737 aaKnown RBP13.72□□□□□ -0.21
SPIDR-217ENST00000522117 KARSQ15046 597 aaKnown RBP13.72□□□□□ -0.21
SPIDR-217ENST00000522117 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.72□□□□□ -0.21
SPIDR-217ENST00000522117 DDX54Q8TDD1 881 aaKnown RBP13.72□□□□□ -0.21
SPIDR-217ENST00000522117 PHACTR3Q96KR7 559 aa13.72□□□□□ -0.21
SPIDR-217ENST00000522117 SPG7Q9UQ90 795 aa13.72□□□□□ -0.21
SPIDR-217ENST00000522117 ATP1A3P13637 1013 aa13.71□□□□□ -0.21
SPIDR-217ENST00000522117 PPFIA1Q13136 1202 aa13.71□□□□□ -0.21
SPIDR-217ENST00000522117 FAM76AQ8TAV0 307 aa13.71□□□□□ -0.21
SPIDR-217ENST00000522117 TFRCP02786 760 aaKnown RBP13.71□□□□□ -0.21
SPIDR-217ENST00000522117 TUBB4BP68371 445 aa13.71□□□□□ -0.21
SPIDR-217ENST00000522117 FAM160A1Q05DH4 1040 aa13.71□□□□□ -0.21
SPIDR-217ENST00000522117 COL9A3Q14050 684 aaPredicted RBP13.71□□□□□ -0.21
SPIDR-217ENST00000522117 RBBP5Q15291 538 aaKnown RBP13.71□□□□□ -0.21
SPIDR-217ENST00000522117 KIF4BQ2VIQ3 1234 aa13.71□□□□□ -0.21
SPIDR-217ENST00000522117 WDR93Q6P2C0 686 aa13.71□□□□□ -0.21
SPIDR-217ENST00000522117 CCDC73Q6ZRK6 1079 aa13.71□□□□□ -0.21
SPIDR-217ENST00000522117 VSTM4Q8IW00 320 aa13.71□□□□□ -0.21
SPIDR-217ENST00000522117 ZBTB10Q96DT7 871 aa13.71□□□□□ -0.21
SPIDR-217ENST00000522117 CDC42BPGQ6DT37 1551 aa13.71□□□□□ -0.22
SPIDR-217ENST00000522117 ZFYVE9O95405 1425 aa13.71□□□□□ -0.22
SPIDR-217ENST00000522117 CHD2O14647 1828 aaKnown RBP13.71□□□□□ -0.22
SPIDR-217ENST00000522117 PDHBP11177 359 aa13.7□□□□□ -0.22
SPIDR-217ENST00000522117 PECAM1P16284 738 aaPredicted RBP13.7□□□□□ -0.22
SPIDR-217ENST00000522117 PSMD2Q13200 908 aa13.7□□□□□ -0.22
SPIDR-217ENST00000522117 NAA25Q14CX7 972 aa13.7□□□□□ -0.22
SPIDR-217ENST00000522117 MAB21L3Q8N8X9 362 aa13.7□□□□□ -0.22
SPIDR-217ENST00000522117 FMNL2Q96PY5 1086 aa13.7□□□□□ -0.22
SPIDR-217ENST00000522117 CAPS2Q9BXY5 557 aa13.7□□□□□ -0.22
SPIDR-217ENST00000522117 C14orf93Q9H972 538 aaKnown RBP13.7□□□□□ -0.22
SPIDR-217ENST00000522117 MRPL44Q9H9J2 332 aaKnown RBP13.7□□□□□ -0.22
SPIDR-217ENST00000522117 ATP6V0A4Q9HBG4 840 aa13.7□□□□□ -0.22
SPIDR-217ENST00000522117 RCOR1Q9UKL0 485 aa13.7□□□□□ -0.22
SPIDR-217ENST00000522117 RIPOR2Q9Y4F9 1068 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms