RNA–Protein interactions for RNA: ENST00000522115.6

PTPN12-215, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 5

Gene PTPN12, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-215	ENST00000522115	RNF208	Q9H0X6	261 aa		7.67	□□□□□ -1.18
PTPN12-215	ENST00000522115	ALX3	O95076	343 aa		7.66	□□□□□ -1.18
PTPN12-215	ENST00000522115	FCGRT	P55899	365 aa		7.66	□□□□□ -1.18
PTPN12-215	ENST00000522115	GSTM4	Q03013	218 aa		7.66	□□□□□ -1.18
PTPN12-215	ENST00000522115	FAAP100	Q0VG06	881 aa		7.66	□□□□□ -1.18
PTPN12-215	ENST00000522115	AP3B2	Q13367	1082 aa		7.66	□□□□□ -1.18
PTPN12-215	ENST00000522115	RSPO4	Q2I0M5	234 aa	Predicted RBP	7.66	□□□□□ -1.18
PTPN12-215	ENST00000522115	UVSSA	Q2YD98	709 aa		7.66	□□□□□ -1.18
PTPN12-215	ENST00000522115	ANKRD34A	Q69YU3	496 aa		7.66	□□□□□ -1.18
PTPN12-215	ENST00000522115	TRIM56	Q9BRZ2	755 aa	Known RBP	7.66	□□□□□ -1.18
PTPN12-215	ENST00000522115	C12orf49	Q9H741	205 aa		7.66	□□□□□ -1.18
PTPN12-215	ENST00000522115	SUGCT	Q9HAC7	445 aa		7.66	□□□□□ -1.18
PTPN12-215	ENST00000522115	FAM8A1	Q9UBU6	413 aa		7.66	□□□□□ -1.18
PTPN12-215	ENST00000522115	DOC2B	Q14184	412 aa		7.65	□□□□□ -1.18
PTPN12-215	ENST00000522115	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	7.65	□□□□□ -1.18
PTPN12-215	ENST00000522115	AGGF1	Q8N302	714 aa	eCLIP	7.65	□□□□□ -1.18
PTPN12-215	ENST00000522115	RUSC1	Q9BVN2	902 aa		7.65	□□□□□ -1.18
PTPN12-215	ENST00000522115	TMPRSS13	Q9BYE2	586 aa		7.65	□□□□□ -1.18
PTPN12-215	ENST00000522115	SYNGAP1	Q96PV0	1343 aa		7.64	□□□□□ -1.19
PTPN12-215	ENST00000522115	TMCO4	Q5TGY1	634 aa		7.64	□□□□□ -1.19
PTPN12-215	ENST00000522115	SMG8	Q8ND04	991 aa	Known RBP	7.64	□□□□□ -1.19
PTPN12-215	ENST00000522115	FAM46A	Q96IP4	442 aa	Known RBP	7.64	□□□□□ -1.19
PTPN12-215	ENST00000522115	TMEM39A	Q9NV64	488 aa		7.64	□□□□□ -1.19
PTPN12-215	ENST00000522115	DLGAP3	O95886	979 aa		7.63	□□□□□ -1.19
PTPN12-215	ENST00000522115	GLB1	P16278	677 aa		7.63	□□□□□ -1.19
PTPN12-215	ENST00000522115	PPP2R3A	Q06190	1150 aa		7.63	□□□□□ -1.19
PTPN12-215	ENST00000522115	TP53INP1	Q96A56	240 aa		7.63	□□□□□ -1.19
PTPN12-215	ENST00000522115	UBL7	Q96S82	380 aa	Predicted RBP	7.63	□□□□□ -1.19
PTPN12-215	ENST00000522115	DUSP9	Q99956	384 aa	Known RBP	7.63	□□□□□ -1.19
PTPN12-215	ENST00000522115	USP26	Q9BXU7	913 aa		7.63	□□□□□ -1.19
PTPN12-215	ENST00000522115	AK5	Q9Y6K8	562 aa		7.63	□□□□□ -1.19
PTPN12-215	ENST00000522115	ADAM23	O75077	832 aa		7.62	□□□□□ -1.19
PTPN12-215	ENST00000522115	TIAF1	O95411	115 aa		7.62	□□□□□ -1.19
PTPN12-215	ENST00000522115	FURIN	P09958	794 aa		7.62	□□□□□ -1.19
PTPN12-215	ENST00000522115	MAOB	P27338	520 aa		7.62	□□□□□ -1.19
PTPN12-215	ENST00000522115	POU4F3	Q15319	338 aa		7.62	□□□□□ -1.19
PTPN12-215	ENST00000522115	EXOSC6	Q5RKV6	272 aa	Known RBP	7.62	□□□□□ -1.19
PTPN12-215	ENST00000522115	CEP44	Q9C0F1	390 aa		7.62	□□□□□ -1.19
PTPN12-215	ENST00000522115		K7ELQ4	463 aa	Predicted RBP	7.61	□□□□□ -1.19
PTPN12-215	ENST00000522115	DYRK3	O43781	588 aa		7.61	□□□□□ -1.19
PTPN12-215	ENST00000522115	EIF4B	P23588	611 aa	Known RBP	7.61	□□□□□ -1.19
PTPN12-215	ENST00000522115	DAB2	P98082	770 aa		7.61	□□□□□ -1.19
PTPN12-215	ENST00000522115	NECAB3	Q96P71	396 aa	Predicted RBP	7.61	□□□□□ -1.19
PTPN12-215	ENST00000522115	CORO1B	Q9BR76	489 aa		7.61	□□□□□ -1.19
PTPN12-215	ENST00000522115	CYP4F12	Q9HCS2	524 aa		7.61	□□□□□ -1.19
PTPN12-215	ENST00000522115	AKAP2	Q9Y2D5	859 aa		7.61	□□□□□ -1.19
PTPN12-215	ENST00000522115	USP17L7	P0C7H9	530 aa		7.6	□□□□□ -1.19
PTPN12-215	ENST00000522115	NUTM2G	Q5VZR2	741 aa		7.6	□□□□□ -1.19
PTPN12-215	ENST00000522115	FDX2	Q6P4F2	183 aa		7.6	□□□□□ -1.19
PTPN12-215	ENST00000522115	PRR23C	Q6ZRP0	262 aa		7.6	□□□□□ -1.19
PTPN12-215	ENST00000522115	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	7.6	□□□□□ -1.19
PTPN12-215	ENST00000522115	TMC4	Q7Z404	712 aa		7.6	□□□□□ -1.19
PTPN12-215	ENST00000522115	ARMC10	Q8N2F6	343 aa		7.6	□□□□□ -1.19
PTPN12-215	ENST00000522115	MYRFL	Q96LU7	910 aa		7.6	□□□□□ -1.19
PTPN12-215	ENST00000522115	KRT82	Q9NSB4	513 aa		7.6	□□□□□ -1.19
PTPN12-215	ENST00000522115	PARP2	Q9UGN5	583 aa		7.6	□□□□□ -1.19
PTPN12-215	ENST00000522115	HIF3A	Q9Y2N7	669 aa		7.6	□□□□□ -1.19
PTPN12-215	ENST00000522115	CTSB	P07858	339 aa		7.59	□□□□□ -1.19
PTPN12-215	ENST00000522115	PREP	P48147	710 aa		7.59	□□□□□ -1.19
PTPN12-215	ENST00000522115	PDZD3	Q86UT5	571 aa		7.59	□□□□□ -1.19
PTPN12-215	ENST00000522115	SLC51A	Q86UW1	340 aa		7.59	□□□□□ -1.19
PTPN12-215	ENST00000522115	GPN3	Q9UHW5	284 aa	Predicted RBP	7.59	□□□□□ -1.19
PTPN12-215	ENST00000522115	ENC1	O14682	589 aa		7.58	□□□□□ -1.2
PTPN12-215	ENST00000522115	DHX15	O43143	795 aa	Known RBP	7.58	□□□□□ -1.2
PTPN12-215	ENST00000522115	GSTP1	P09211	210 aa	Known RBP	7.58	□□□□□ -1.2
PTPN12-215	ENST00000522115	NME2	P22392	152 aa		7.58	□□□□□ -1.2
PTPN12-215	ENST00000522115	HNRNPU	Q00839	825 aa	Known RBP eCLIP	7.58	□□□□□ -1.2
PTPN12-215	ENST00000522115	SCARA3	Q6AZY7	606 aa		7.58	□□□□□ -1.2
PTPN12-215	ENST00000522115	UTP4	Q969X6	686 aa	Known RBP	7.58	□□□□□ -1.2
PTPN12-215	ENST00000522115	CACNA2D2	Q9NY47	1150 aa		7.58	□□□□□ -1.2
PTPN12-215	ENST00000522115	ECEL1	O95672	775 aa		7.57	□□□□□ -1.2
PTPN12-215	ENST00000522115	ARNT	P27540	789 aa		7.57	□□□□□ -1.2
PTPN12-215	ENST00000522115	ITGAE	P38570	1179 aa		7.57	□□□□□ -1.2
PTPN12-215	ENST00000522115	ZNF157	P51786	506 aa	Predicted RBP	7.57	□□□□□ -1.2
PTPN12-215	ENST00000522115	SULF2	Q8IWU5	870 aa		7.57	□□□□□ -1.2
PTPN12-215	ENST00000522115	RNF19A	Q9NV58	838 aa		7.57	□□□□□ -1.2
PTPN12-215	ENST00000522115	SART1	O43290	800 aa	Known RBP	7.56	□□□□□ -1.2
PTPN12-215	ENST00000522115	ADH5	P11766	374 aa		7.56	□□□□□ -1.2
PTPN12-215	ENST00000522115	ITGB7	P26010	798 aa		7.56	□□□□□ -1.2
PTPN12-215	ENST00000522115	MFAP1	P55081	439 aa	Known RBP	7.56	□□□□□ -1.2
PTPN12-215	ENST00000522115	XPC	Q01831	940 aa	Predicted RBP	7.56	□□□□□ -1.2
PTPN12-215	ENST00000522115	SOX4	Q06945	474 aa	Predicted RBP	7.56	□□□□□ -1.2
PTPN12-215	ENST00000522115	ZNF252P-AS1	Q0IIN9	211 aa		7.56	□□□□□ -1.2
PTPN12-215	ENST00000522115	PSMD2	Q13200	908 aa		7.56	□□□□□ -1.2
PTPN12-215	ENST00000522115	SV2B	Q7L1I2	683 aa		7.56	□□□□□ -1.2
PTPN12-215	ENST00000522115	FAM20C	Q8IXL6	584 aa		7.56	□□□□□ -1.2
PTPN12-215	ENST00000522115	C12orf50	Q8NA57	414 aa	Predicted RBP	7.56	□□□□□ -1.2
PTPN12-215	ENST00000522115	EMILIN2	Q9BXX0	1053 aa		7.56	□□□□□ -1.2
PTPN12-215	ENST00000522115	SEMA6B	Q9H3T3	888 aa		7.56	□□□□□ -1.2
PTPN12-215	ENST00000522115	GSX1	Q9H4S2	264 aa	Predicted RBP	7.56	□□□□□ -1.2
PTPN12-215	ENST00000522115	SAMM50	Q9Y512	469 aa		7.56	□□□□□ -1.2
PTPN12-215	ENST00000522115	ST13	P50502	369 aa	Known RBP	7.55	□□□□□ -1.2
PTPN12-215	ENST00000522115	TRIM26	Q12899	539 aa	Predicted RBP	7.55	□□□□□ -1.2
PTPN12-215	ENST00000522115	KIF4B	Q2VIQ3	1234 aa		7.55	□□□□□ -1.2
PTPN12-215	ENST00000522115	TPTE2	Q6XPS3	522 aa		7.55	□□□□□ -1.2
PTPN12-215	ENST00000522115	C2CD4A	Q8NCU7	369 aa	Predicted RBP	7.55	□□□□□ -1.2
PTPN12-215	ENST00000522115	STK35	Q8TDR2	534 aa		7.55	□□□□□ -1.2
PTPN12-215	ENST00000522115	WDR18	Q9BV38	432 aa		7.55	□□□□□ -1.2
PTPN12-215	ENST00000522115	CCDC86	Q9H6F5	360 aa	Known RBP	7.55	□□□□□ -1.2
PTPN12-215	ENST00000522115	RAX	Q9Y2V3	346 aa		7.55	□□□□□ -1.2

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