RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 TNFRSF21O75509 655 aa9.38□□□□□ -0.91
PABPC1-216ENST00000520868 PTPRAP18433 802 aa9.38□□□□□ -0.91
PABPC1-216ENST00000520868 TXNDC2Q86VQ3 553 aa9.38□□□□□ -0.91
PABPC1-216ENST00000520868 CCDC87Q9NVE4 849 aa9.38□□□□□ -0.91
PABPC1-216ENST00000520868 BRPF3Q9ULD4 1205 aa9.38□□□□□ -0.91
PABPC1-216ENST00000520868 NOS3P29474 1203 aa9.37□□□□□ -0.91
PABPC1-216ENST00000520868 CDC27P30260 824 aa9.37□□□□□ -0.91
PABPC1-216ENST00000520868 CDC25BP30305 580 aa9.37□□□□□ -0.91
PABPC1-216ENST00000520868 IREB2P48200 963 aaKnown RBP9.37□□□□□ -0.91
PABPC1-216ENST00000520868 WFDC12Q8WWY7 111 aa9.37□□□□□ -0.91
PABPC1-216ENST00000520868 SSBP4Q9BWG4 385 aaPredicted RBP9.37□□□□□ -0.91
PABPC1-216ENST00000520868 MLH3Q9UHC1 1453 aa9.36□□□□□ -0.91
PABPC1-216ENST00000520868 TRPA1O75762 1119 aa9.36□□□□□ -0.91
PABPC1-216ENST00000520868 ALX3O95076 343 aa9.36□□□□□ -0.91
PABPC1-216ENST00000520868 HNRNPMP52272 730 aaKnown RBP eCLIP9.36□□□□□ -0.91
PABPC1-216ENST00000520868 SETDB1Q15047 1291 aa9.36□□□□□ -0.91
PABPC1-216ENST00000520868 CHRDQ9H2X0 955 aa9.36□□□□□ -0.91
PABPC1-216ENST00000520868 KDM5CP41229 1560 aa9.36□□□□□ -0.91
PABPC1-216ENST00000520868 DIP2CQ9Y2E4 1556 aa9.36□□□□□ -0.91
PABPC1-216ENST00000520868 PREX1Q8TCU6 1659 aa9.36□□□□□ -0.91
PABPC1-216ENST00000520868 LINC01387J3KSC0 135 aa9.35□□□□□ -0.91
PABPC1-216ENST00000520868 NDUFB5O43674 189 aa9.35□□□□□ -0.91
PABPC1-216ENST00000520868 EDN3P14138 238 aa9.35□□□□□ -0.91
PABPC1-216ENST00000520868 FOXD4L6Q3SYB3 417 aaPredicted RBP9.35□□□□□ -0.91
PABPC1-216ENST00000520868 FAM117BQ6P1L5 589 aa9.35□□□□□ -0.91
PABPC1-216ENST00000520868 FOXD4L3Q6VB84 417 aaPredicted RBP9.35□□□□□ -0.91
PABPC1-216ENST00000520868 GALNT11Q8NCW6 608 aa9.35□□□□□ -0.91
PABPC1-216ENST00000520868 CASKIN1Q8WXD9 1431 aa9.35□□□□□ -0.91
PABPC1-216ENST00000520868 MEGF10Q96KG7 1140 aa9.35□□□□□ -0.91
PABPC1-216ENST00000520868 SH2B1Q9NRF2 756 aaPredicted RBP9.35□□□□□ -0.91
PABPC1-216ENST00000520868 DISP3Q9P2K9 1392 aa9.35□□□□□ -0.91
PABPC1-216ENST00000520868 NEFLP07196 543 aa9.34□□□□□ -0.91
PABPC1-216ENST00000520868 CABP4P57796 275 aa9.34□□□□□ -0.91
PABPC1-216ENST00000520868 TP53INP1Q96A56 240 aa9.34□□□□□ -0.91
PABPC1-216ENST00000520868 HHIPQ96QV1 700 aa9.34□□□□□ -0.91
PABPC1-216ENST00000520868 ADAM19Q9H013 955 aa9.34□□□□□ -0.91
PABPC1-216ENST00000520868 MRPL18Q9H0U6 180 aaKnown RBP9.34□□□□□ -0.91
PABPC1-216ENST00000520868 DZANK1Q9NVP4 752 aa9.34□□□□□ -0.91
PABPC1-216ENST00000520868 CDC42BPBQ9Y5S2 1711 aa9.34□□□□□ -0.92
PABPC1-216ENST00000520868 SETD1BQ9UPS6 1966 aaKnown RBP9.33□□□□□ -0.92
PABPC1-216ENST00000520868 SPAG9O60271 1321 aaKnown RBP9.33□□□□□ -0.92
PABPC1-216ENST00000520868 BRD1O95696 1058 aa9.33□□□□□ -0.92
PABPC1-216ENST00000520868 ARHGAP4P98171 946 aa9.33□□□□□ -0.92
PABPC1-216ENST00000520868 PDE3BQ13370 1112 aa9.33□□□□□ -0.92
PABPC1-216ENST00000520868 CITED4Q96RK1 184 aa9.33□□□□□ -0.92
PABPC1-216ENST00000520868 POP1Q99575 1024 aaKnown RBP9.33□□□□□ -0.92
PABPC1-216ENST00000520868 CARD10Q9BWT7 1032 aa9.33□□□□□ -0.92
PABPC1-216ENST00000520868 FOXD3Q9UJU5 478 aaPredicted RBP9.33□□□□□ -0.92
PABPC1-216ENST00000520868 AMOTL2Q9Y2J4 779 aa9.33□□□□□ -0.92
PABPC1-216ENST00000520868 ABCA6Q8N139 1617 aa9.33□□□□□ -0.92
PABPC1-216ENST00000520868 LRRIQ1Q96JM4 1722 aa9.33□□□□□ -0.92
PABPC1-216ENST00000520868 CCDC18Q5T9S5 1454 aa9.33□□□□□ -0.92
PABPC1-216ENST00000520868 STRCQ7RTU9 1775 aa9.32□□□□□ -0.92
PABPC1-216ENST00000520868 PTPRTO14522 1441 aa9.32□□□□□ -0.92
PABPC1-216ENST00000520868 ABCC1P33527 1531 aa9.32□□□□□ -0.92
PABPC1-216ENST00000520868 PDE2AO00408 941 aaPredicted RBP9.32□□□□□ -0.92
PABPC1-216ENST00000520868 EREGO14944 169 aa9.32□□□□□ -0.92
PABPC1-216ENST00000520868 XP32Q5T750 250 aa9.32□□□□□ -0.92
PABPC1-216ENST00000520868 AGGF1Q8N302 714 aaeCLIP9.32□□□□□ -0.92
PABPC1-216ENST00000520868 KCNK4Q9NYG8 393 aa9.32□□□□□ -0.92
PABPC1-216ENST00000520868 CFDP1Q9UEE9 299 aaPredicted RBP9.32□□□□□ -0.92
PABPC1-216ENST00000520868 AGLP35573 1532 aa9.31□□□□□ -0.92
PABPC1-216ENST00000520868 NFKBIEO00221 500 aa9.31□□□□□ -0.92
PABPC1-216ENST00000520868 TM4SF5O14894 197 aa9.31□□□□□ -0.92
PABPC1-216ENST00000520868 EPHA1P21709 976 aa9.31□□□□□ -0.92
PABPC1-216ENST00000520868 ECM1Q16610 540 aa9.31□□□□□ -0.92
PABPC1-216ENST00000520868 PRSS36Q5K4E3 855 aa9.31□□□□□ -0.92
PABPC1-216ENST00000520868 GGT6Q6P531 493 aa9.31□□□□□ -0.92
PABPC1-216ENST00000520868 TMEM130Q8N3G9 435 aa9.31□□□□□ -0.92
PABPC1-216ENST00000520868 Q8N3U1 123 aa9.31□□□□□ -0.92
PABPC1-216ENST00000520868 TMEM102Q8N9M5 508 aaPredicted RBP9.31□□□□□ -0.92
PABPC1-216ENST00000520868 KLHL23Q8NBE8 558 aa9.31□□□□□ -0.92
PABPC1-216ENST00000520868 ZMYM3Q14202 1370 aa9.31□□□□□ -0.92
PABPC1-216ENST00000520868 REREQ9P2R6 1566 aa9.31□□□□□ -0.92
PABPC1-216ENST00000520868 PREX2Q70Z35 1606 aa9.31□□□□□ -0.92
PABPC1-216ENST00000520868 CNTLNQ9NXG0 1405 aa9.31□□□□□ -0.92
PABPC1-216ENST00000520868 C3P01024 1663 aa9.3□□□□□ -0.92
PABPC1-216ENST00000520868 H3BRJ5 948 aa9.3□□□□□ -0.92
PABPC1-216ENST00000520868 WISP1O95388 367 aa9.3□□□□□ -0.92
PABPC1-216ENST00000520868 WNT8BQ93098 351 aa9.3□□□□□ -0.92
PABPC1-216ENST00000520868 OSMRQ99650 979 aa9.3□□□□□ -0.92
PABPC1-216ENST00000520868 AKTIPQ9H8T0 292 aa9.3□□□□□ -0.92
PABPC1-216ENST00000520868 ZFYVE28Q9HCC9 887 aa9.3□□□□□ -0.92
PABPC1-216ENST00000520868 GNEQ9Y223 722 aaKnown RBP9.3□□□□□ -0.92
PABPC1-216ENST00000520868 GPATCH8Q9UKJ3 1502 aaKnown RBP9.3□□□□□ -0.92
PABPC1-216ENST00000520868 F8W735 103 aaPredicted RBP9.29□□□□□ -0.92
PABPC1-216ENST00000520868 FSCN2O14926 492 aa9.29□□□□□ -0.92
PABPC1-216ENST00000520868 PIP4K2BP78356 416 aa9.29□□□□□ -0.92
PABPC1-216ENST00000520868 ZMYM1Q5SVZ6 1142 aa9.29□□□□□ -0.92
PABPC1-216ENST00000520868 ZKSCAN3Q9BRR0 538 aa9.29□□□□□ -0.92
PABPC1-216ENST00000520868 KIDINS220Q9ULH0 1771 aa9.29□□□□□ -0.92
PABPC1-216ENST00000520868 ITSN2Q9NZM3 1697 aa9.29□□□□□ -0.92
PABPC1-216ENST00000520868 SAMD9LQ8IVG5 1584 aa9.29□□□□□ -0.92
PABPC1-216ENST00000520868 CCNB3Q8WWL7 1395 aa9.28□□□□□ -0.92
PABPC1-216ENST00000520868 DDX3YO15523 660 aaKnown RBP9.28□□□□□ -0.92
PABPC1-216ENST00000520868 H2AFB1P0C5Y9 115 aa9.28□□□□□ -0.92
PABPC1-216ENST00000520868 H2AFB2P0C5Z0 115 aa9.28□□□□□ -0.92
PABPC1-216ENST00000520868 CD68P34810 354 aaPredicted RBP9.28□□□□□ -0.92
PABPC1-216ENST00000520868 NXPE3Q969Y0 559 aa9.28□□□□□ -0.92
PABPC1-216ENST00000520868 SEC31BQ9NQW1 1179 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms