RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 SCARF2Q96GP6 870 aaPredicted RBP7.35□□□□□ -1.23
SQLE-202ENST00000518604 PLVAPQ9BX97 442 aa7.35□□□□□ -1.23
SQLE-202ENST00000518604 GGT7Q9UJ14 662 aa7.35□□□□□ -1.23
SQLE-202ENST00000518604 A0A0A0MRY4 1105 aa7.34□□□□□ -1.23
SQLE-202ENST00000518604 FBXO24O75426 580 aa7.34□□□□□ -1.23
SQLE-202ENST00000518604 CDC25BP30305 580 aa7.34□□□□□ -1.23
SQLE-202ENST00000518604 GSTM4Q03013 218 aa7.34□□□□□ -1.23
SQLE-202ENST00000518604 TRIM28Q13263 835 aaKnown RBP7.34□□□□□ -1.23
SQLE-202ENST00000518604 LRRC14Q15048 493 aa7.34□□□□□ -1.23
SQLE-202ENST00000518604 SLC7A3Q8WY07 619 aa7.34□□□□□ -1.23
SQLE-202ENST00000518604 CYP8B1Q9UNU6 501 aa7.34□□□□□ -1.23
SQLE-202ENST00000518604 TM4SF5O14894 197 aa7.33□□□□□ -1.24
SQLE-202ENST00000518604 DEAF1O75398 565 aaPredicted RBP7.33□□□□□ -1.24
SQLE-202ENST00000518604 CELA3AP09093 270 aa7.33□□□□□ -1.24
SQLE-202ENST00000518604 ARNTP27540 789 aa7.33□□□□□ -1.24
SQLE-202ENST00000518604 HNRNPUQ00839 825 aaKnown RBP eCLIP7.33□□□□□ -1.24
SQLE-202ENST00000518604 PRRT3Q5FWE3 981 aa7.33□□□□□ -1.24
SQLE-202ENST00000518604 HP1BP3Q5SSJ5 553 aaPredicted RBP7.33□□□□□ -1.24
SQLE-202ENST00000518604 TXNDC11Q6PKC3 985 aa7.33□□□□□ -1.24
SQLE-202ENST00000518604 NT5DC4Q86YG4 428 aa7.33□□□□□ -1.24
SQLE-202ENST00000518604 FMR1NBQ8N0W7 255 aaPredicted RBP7.33□□□□□ -1.24
SQLE-202ENST00000518604 KLHDC7BQ96G42 594 aa7.33□□□□□ -1.24
SQLE-202ENST00000518604 BMP6P22004 513 aa7.32□□□□□ -1.24
SQLE-202ENST00000518604 CD68P34810 354 aaPredicted RBP7.32□□□□□ -1.24
SQLE-202ENST00000518604 LIG3P49916 1009 aa7.32□□□□□ -1.24
SQLE-202ENST00000518604 ZNF157P51786 506 aaPredicted RBP7.32□□□□□ -1.24
SQLE-202ENST00000518604 TTBK2Q6IQ55 1244 aa7.32□□□□□ -1.24
SQLE-202ENST00000518604 AGMOQ6ZNB7 445 aa7.32□□□□□ -1.24
SQLE-202ENST00000518604 ALYREFQ86V81 257 aaKnown RBP7.32□□□□□ -1.24
SQLE-202ENST00000518604 SULF2Q8IWU5 870 aa7.32□□□□□ -1.24
SQLE-202ENST00000518604 TMEM74Q96NL1 305 aa7.32□□□□□ -1.24
SQLE-202ENST00000518604 TGIF2Q9GZN2 237 aa7.32□□□□□ -1.24
SQLE-202ENST00000518604 DLL1O00548 723 aa7.31□□□□□ -1.24
SQLE-202ENST00000518604 ELNP15502 786 aa7.31□□□□□ -1.24
SQLE-202ENST00000518604 ERCC5P28715 1186 aaPredicted RBP7.31□□□□□ -1.24
SQLE-202ENST00000518604 POU4F3Q15319 338 aa7.31□□□□□ -1.24
SQLE-202ENST00000518604 PCNX4Q63HM2 1172 aa7.31□□□□□ -1.24
SQLE-202ENST00000518604 HGSNATQ68CP4 663 aa7.31□□□□□ -1.24
SQLE-202ENST00000518604 USP48Q86UV5 1035 aa7.31□□□□□ -1.24
SQLE-202ENST00000518604 ZNF654Q8IZM8 581 aa7.31□□□□□ -1.24
SQLE-202ENST00000518604 GALNT11Q8NCW6 608 aa7.31□□□□□ -1.24
SQLE-202ENST00000518604 TRIM56Q9BRZ2 755 aaKnown RBP7.31□□□□□ -1.24
SQLE-202ENST00000518604 CARD10Q9BWT7 1032 aa7.31□□□□□ -1.24
SQLE-202ENST00000518604 NRSN2Q9GZP1 204 aa7.31□□□□□ -1.24
SQLE-202ENST00000518604 DDX41Q9UJV9 622 aaKnown RBP7.31□□□□□ -1.24
SQLE-202ENST00000518604 CNTNAP5Q8WYK1 1306 aa7.3□□□□□ -1.24
SQLE-202ENST00000518604 PAGE1O75459 146 aa7.3□□□□□ -1.24
SQLE-202ENST00000518604 GSTP1P09211 210 aaKnown RBP7.3□□□□□ -1.24
SQLE-202ENST00000518604 GBP2P32456 591 aaPredicted RBP7.3□□□□□ -1.24
SQLE-202ENST00000518604 C9orf131Q5VYM1 1079 aa7.3□□□□□ -1.24
SQLE-202ENST00000518604 DIEXFQ68CQ4 756 aaKnown RBP7.3□□□□□ -1.24
SQLE-202ENST00000518604 IGF2-ASQ6U949 168 aa7.3□□□□□ -1.24
SQLE-202ENST00000518604 CCDC84Q86UT8 332 aaPredicted RBP7.3□□□□□ -1.24
SQLE-202ENST00000518604 PHC3Q8NDX5 983 aa7.3□□□□□ -1.24
SQLE-202ENST00000518604 CORO1BQ9BR76 489 aa7.3□□□□□ -1.24
SQLE-202ENST00000518604 KRT82Q9NSB4 513 aa7.3□□□□□ -1.24
SQLE-202ENST00000518604 KBTBD4Q9NVX7 518 aa7.3□□□□□ -1.24
SQLE-202ENST00000518604 SPATA31C1P0DKV0 1188 aa7.29□□□□□ -1.24
SQLE-202ENST00000518604 LMNB1P20700 586 aa7.29□□□□□ -1.24
SQLE-202ENST00000518604 LMNB2Q03252 620 aa7.29□□□□□ -1.24
SQLE-202ENST00000518604 RAD51AP2Q09MP3 1159 aa7.29□□□□□ -1.24
SQLE-202ENST00000518604 ZNF252P-AS1Q0IIN9 211 aa7.29□□□□□ -1.24
SQLE-202ENST00000518604 LLGL2Q6P1M3 1020 aa7.29□□□□□ -1.24
SQLE-202ENST00000518604 PDZD3Q86UT5 571 aa7.29□□□□□ -1.24
SQLE-202ENST00000518604 COPRSQ9NQ92 184 aa7.29□□□□□ -1.24
SQLE-202ENST00000518604 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.29□□□□□ -1.24
SQLE-202ENST00000518604 SYNGAP1Q96PV0 1343 aa7.28□□□□□ -1.24
SQLE-202ENST00000518604 TRIM37O94972 964 aa7.28□□□□□ -1.24
SQLE-202ENST00000518604 MAOBP27338 520 aa7.28□□□□□ -1.24
SQLE-202ENST00000518604 MAP3K11Q16584 847 aa7.28□□□□□ -1.24
SQLE-202ENST00000518604 FOXD4L6Q3SYB3 417 aaPredicted RBP7.28□□□□□ -1.24
SQLE-202ENST00000518604 FOXD4L3Q6VB84 417 aaPredicted RBP7.28□□□□□ -1.24
SQLE-202ENST00000518604 RHOVQ96L33 236 aa7.28□□□□□ -1.24
SQLE-202ENST00000518604 CBX8Q9HC52 389 aa7.28□□□□□ -1.24
SQLE-202ENST00000518604 KCNQ5Q9NR82 932 aa7.28□□□□□ -1.24
SQLE-202ENST00000518604 CACNA2D2Q9NY47 1150 aa7.28□□□□□ -1.24
SQLE-202ENST00000518604 LOC100289279A0A1B0GTE1 492 aa7.27□□□□□ -1.25
SQLE-202ENST00000518604 EIF4A3P38919 411 aaKnown RBP7.27□□□□□ -1.25
SQLE-202ENST00000518604 GSK3AP49840 483 aa7.27□□□□□ -1.25
SQLE-202ENST00000518604 NLRP12P59046 1061 aa7.27□□□□□ -1.25
SQLE-202ENST00000518604 DUOXA2Q1HG44 320 aa7.27□□□□□ -1.25
SQLE-202ENST00000518604 TRIM42Q8IWZ5 723 aa7.27□□□□□ -1.25
SQLE-202ENST00000518604 TMEM130Q8N3G9 435 aa7.27□□□□□ -1.25
SQLE-202ENST00000518604 STK35Q8TDR2 534 aa7.27□□□□□ -1.25
SQLE-202ENST00000518604 C8orf37Q96NL8 207 aa7.27□□□□□ -1.25
SQLE-202ENST00000518604 NACC1Q96RE7 527 aa7.27□□□□□ -1.25
SQLE-202ENST00000518604 MRPL18Q9H0U6 180 aaKnown RBP7.27□□□□□ -1.25
SQLE-202ENST00000518604 MIR1-1HGQ9H1L0 117 aa7.27□□□□□ -1.25
SQLE-202ENST00000518604 CCSER2Q9H7U1 834 aa7.27□□□□□ -1.25
SQLE-202ENST00000518604 ROBO2Q9HCK4 1378 aa7.26□□□□□ -1.25
SQLE-202ENST00000518604 MEGF11A6BM72 1044 aa7.26□□□□□ -1.25
SQLE-202ENST00000518604 MINDY4BA8MYZ0 360 aa7.26□□□□□ -1.25
SQLE-202ENST00000518604 ADAM11O75078 769 aa7.26□□□□□ -1.25
SQLE-202ENST00000518604 TFE3P19532 575 aaPredicted RBP7.26□□□□□ -1.25
SQLE-202ENST00000518604 ZC3H6P61129 1189 aaKnown RBP7.26□□□□□ -1.25
SQLE-202ENST00000518604 RACK1P63244 317 aaKnown RBP7.26□□□□□ -1.25
SQLE-202ENST00000518604 CAMK2GQ13555 558 aaPredicted RBP7.26□□□□□ -1.25
SQLE-202ENST00000518604 ZNF394Q53GI3 561 aa7.26□□□□□ -1.25
SQLE-202ENST00000518604 EXOSC6Q5RKV6 272 aaKnown RBP7.26□□□□□ -1.25
SQLE-202ENST00000518604 KCNB2Q92953 911 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms