RNA–Protein interactions for RNA: ENST00000517276.1

SCARNA11.3-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 130 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.3-201ENST00000517276 L1CAMP32004 1257 aa3.53□□□□□ -1.84
SCARNA11.3-201ENST00000517276 GRIA4P48058 902 aa3.53□□□□□ -1.84
SCARNA11.3-201ENST00000517276 ZNF157P51786 506 aaPredicted RBP3.53□□□□□ -1.84
SCARNA11.3-201ENST00000517276 GUCY2FP51841 1108 aa3.53□□□□□ -1.84
SCARNA11.3-201ENST00000517276 EPHB1P54762 984 aa3.53□□□□□ -1.84
SCARNA11.3-201ENST00000517276 NR5A1Q13285 461 aa3.53□□□□□ -1.84
SCARNA11.3-201ENST00000517276 PABPC4Q13310 644 aaKnown RBP eCLIP3.53□□□□□ -1.84
SCARNA11.3-201ENST00000517276 OS9Q13438 667 aaPredicted RBP3.53□□□□□ -1.84
SCARNA11.3-201ENST00000517276 SAFB2Q14151 953 aaKnown RBP eCLIP3.53□□□□□ -1.84
SCARNA11.3-201ENST00000517276 DHX8Q14562 1220 aaKnown RBP3.53□□□□□ -1.84
SCARNA11.3-201ENST00000517276 TTC39BQ5VTQ0 682 aaPredicted RBP3.53□□□□□ -1.84
SCARNA11.3-201ENST00000517276 NBPF10Q6P3W6 841 aaKnown RBP3.53□□□□□ -1.84
SCARNA11.3-201ENST00000517276 CNNM4Q6P4Q7 775 aa3.53□□□□□ -1.84
SCARNA11.3-201ENST00000517276 KSR2Q6VAB6 950 aa3.53□□□□□ -1.84
SCARNA11.3-201ENST00000517276 LHFPL2Q6ZUX7 228 aa3.53□□□□□ -1.84
SCARNA11.3-201ENST00000517276 KRT25Q7Z3Z0 450 aa3.53□□□□□ -1.84
SCARNA11.3-201ENST00000517276 NLRP13Q86W25 1043 aa3.53□□□□□ -1.84
SCARNA11.3-201ENST00000517276 TRIM42Q8IWZ5 723 aa3.53□□□□□ -1.84
SCARNA11.3-201ENST00000517276 ZSWIM2Q8NEG5 633 aa3.53□□□□□ -1.84
SCARNA11.3-201ENST00000517276 ATL2Q8NHH9 583 aa3.53□□□□□ -1.84
SCARNA11.3-201ENST00000517276 TRIM52Q96A61 297 aa3.53□□□□□ -1.84
SCARNA11.3-201ENST00000517276 KCTD12Q96CX2 325 aaKnown RBP3.53□□□□□ -1.84
SCARNA11.3-201ENST00000517276 CNTNAP3BQ96NU0 1288 aa3.53□□□□□ -1.84
SCARNA11.3-201ENST00000517276 CNTNAP3Q9BZ76 1288 aa3.53□□□□□ -1.84
SCARNA11.3-201ENST00000517276 ASPSCR1Q9BZE9 553 aa3.53□□□□□ -1.84
SCARNA11.3-201ENST00000517276 MAF1Q9H063 256 aa3.53□□□□□ -1.84
SCARNA11.3-201ENST00000517276 CCDC8Q9H0W5 538 aaPredicted RBP3.53□□□□□ -1.84
SCARNA11.3-201ENST00000517276 ANTXR1Q9H6X2 564 aa3.53□□□□□ -1.84
SCARNA11.3-201ENST00000517276 GNL3LQ9NVN8 582 aaKnown RBP3.53□□□□□ -1.84
SCARNA11.3-201ENST00000517276 MCM8Q9UJA3 840 aa3.53□□□□□ -1.84
SCARNA11.3-201ENST00000517276 ZNRF3Q9ULT6 936 aa3.53□□□□□ -1.84
SCARNA11.3-201ENST00000517276 NOB1Q9ULX3 412 aaKnown RBP3.53□□□□□ -1.84
SCARNA11.3-201ENST00000517276 A0A1W2PQH9 124 aa3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 FAM221AA4D161 298 aa3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 GSG1L2A8MUP6 293 aa3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 ALG1L2C9J202 215 aa3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 RNF223E7ERA6 249 aa3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 AKAP10O43572 662 aa3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 ADCY3O60266 1144 aa3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 ST18O60284 1047 aa3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 RAPGEF3O95398 923 aa3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 EDN3P14138 238 aa3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 GTF2E1P29083 439 aaPredicted RBP3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 SOX5P35711 763 aa3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 ZNF165P49910 485 aa3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 CASP7P55210 303 aa3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 TYRO3Q06418 890 aa3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 FAAP100Q0VG06 881 aa3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 MPP2Q14168 576 aa3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 BRD3Q15059 726 aa3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 HIF1AQ16665 826 aa3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 CWF19L2Q2TBE0 894 aaKnown RBP3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 NBPF1Q3BBV0 1214 aa3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 TMEM67Q5HYA8 995 aa3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 GNASQ5JWF2 1037 aa3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 SLC27A3Q5K4L6 730 aa3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 PERM1Q5SV97 790 aa3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 C10orf62Q5T681 223 aaPredicted RBP3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 FOXB2Q5VYV0 432 aa3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 SLC4A10Q6U841 1118 aa3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 REC114Q7Z4M0 266 aa3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 CHPFQ8IZ52 775 aa3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 MYO1HQ8N1T3 1032 aa3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 NME8Q8N427 588 aa3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 AFAP1L2Q8N4X5 818 aa3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 OR6P1Q8NGX9 317 aa3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 TTC8Q8TAM2 541 aa3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 GATAD2BQ8WXI9 593 aa3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 RELTQ969Z4 430 aa3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 CLUHP3Q96NS8 147 aa3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 NECAB3Q96P71 396 aaPredicted RBP3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 HS3ST6Q96QI5 342 aa3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 HHIPQ96QV1 700 aa3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 ZIC5Q96T25 663 aa3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 ZKSCAN3Q9BRR0 538 aa3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 TARS2Q9BW92 718 aaKnown RBP3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 SPATA9Q9BWV2 254 aa3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 RTFDC1Q9BY42 306 aaPredicted RBP3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 LRRC3Q9BY71 257 aa3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 ZIM2Q9NZV7 527 aa3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 GPN3Q9UHW5 284 aaPredicted RBP3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 LAS1LQ9Y4W2 734 aaKnown RBP3.52□□□□□ -1.85
SCARNA11.3-201ENST00000517276 POTEMA6NI47 508 aa3.51□□□□□ -1.85
SCARNA11.3-201ENST00000517276 GRIN3BO60391 1043 aa3.51□□□□□ -1.85
SCARNA11.3-201ENST00000517276 SASH3O75995 380 aa3.51□□□□□ -1.85
SCARNA11.3-201ENST00000517276 MYL1P05976 194 aa3.51□□□□□ -1.85
SCARNA11.3-201ENST00000517276 TATP17735 454 aaPredicted RBP3.51□□□□□ -1.85
SCARNA11.3-201ENST00000517276 SDSP20132 328 aa3.51□□□□□ -1.85
SCARNA11.3-201ENST00000517276 ATP4AP20648 1035 aa3.51□□□□□ -1.85
SCARNA11.3-201ENST00000517276 PMLP29590 882 aa3.51□□□□□ -1.85
SCARNA11.3-201ENST00000517276 NEK2P51955 445 aa3.51□□□□□ -1.85
SCARNA11.3-201ENST00000517276 PTPN5P54829 565 aa3.51□□□□□ -1.85
SCARNA11.3-201ENST00000517276 NNTQ13423 1086 aa3.51□□□□□ -1.85
SCARNA11.3-201ENST00000517276 MTMR1Q13613 665 aa3.51□□□□□ -1.85
SCARNA11.3-201ENST00000517276 LONRF3Q496Y0 759 aa3.51□□□□□ -1.85
SCARNA11.3-201ENST00000517276 AKAP4Q5JQC9 854 aa3.51□□□□□ -1.85
SCARNA11.3-201ENST00000517276 COL13A1Q5TAT6 717 aaPredicted RBP3.51□□□□□ -1.85
SCARNA11.3-201ENST00000517276 PODNQ7Z5L7 613 aa3.51□□□□□ -1.85
SCARNA11.3-201ENST00000517276 TTC6Q86TZ1 520 aa3.51□□□□□ -1.85
SCARNA11.3-201ENST00000517276 CCNJLQ8IV13 435 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms