RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 KIF16BQ96L93 1317 aa7.29□□□□□ -1.24
SCARNA6.1-201ENST00000516989 POTEB3A0JP26 581 aa7.29□□□□□ -1.24
SCARNA6.1-201ENST00000516989 USP17L3A6NCW0 530 aa7.29□□□□□ -1.24
SCARNA6.1-201ENST00000516989 USP17L4A6NCW7 530 aa7.29□□□□□ -1.24
SCARNA6.1-201ENST00000516989 PLIN1O60240 522 aa7.29□□□□□ -1.24
SCARNA6.1-201ENST00000516989 PCCAP05165 728 aaPredicted RBP7.29□□□□□ -1.24
SCARNA6.1-201ENST00000516989 TRIM27P14373 513 aa7.29□□□□□ -1.24
SCARNA6.1-201ENST00000516989 BCAMP50895 628 aa7.29□□□□□ -1.24
SCARNA6.1-201ENST00000516989 CCT4P50991 539 aaKnown RBP7.29□□□□□ -1.24
SCARNA6.1-201ENST00000516989 USP17L2Q6R6M4 530 aa7.29□□□□□ -1.24
SCARNA6.1-201ENST00000516989 POTEBQ6S5H4 581 aa7.29□□□□□ -1.24
SCARNA6.1-201ENST00000516989 USP17L1Q7RTZ2 530 aa7.29□□□□□ -1.24
SCARNA6.1-201ENST00000516989 FTSJ3Q8IY81 847 aaKnown RBP7.29□□□□□ -1.24
SCARNA6.1-201ENST00000516989 RPGRQ92834 1020 aaKnown RBP7.29□□□□□ -1.24
SCARNA6.1-201ENST00000516989 CNKSR1Q969H4 720 aa7.29□□□□□ -1.24
SCARNA6.1-201ENST00000516989 MASTLQ96GX5 879 aa7.29□□□□□ -1.24
SCARNA6.1-201ENST00000516989 CCDC85AQ96PX6 553 aaPredicted RBP7.29□□□□□ -1.24
SCARNA6.1-201ENST00000516989 HS3ST6Q96QI5 342 aa7.29□□□□□ -1.24
SCARNA6.1-201ENST00000516989 PIM2Q9P1W9 311 aa7.29□□□□□ -1.24
SCARNA6.1-201ENST00000516989 TSR3Q9UJK0 312 aaKnown RBP7.29□□□□□ -1.24
SCARNA6.1-201ENST00000516989 TNNQ9UQP3 1299 aa7.29□□□□□ -1.24
SCARNA6.1-201ENST00000516989 BCS1LQ9Y276 419 aa7.29□□□□□ -1.24
SCARNA6.1-201ENST00000516989 USP17L5A8MUK1 530 aa7.28□□□□□ -1.24
SCARNA6.1-201ENST00000516989 PDE8AO60658 829 aa7.28□□□□□ -1.24
SCARNA6.1-201ENST00000516989 SRGNP10124 158 aa7.28□□□□□ -1.24
SCARNA6.1-201ENST00000516989 NPR1P16066 1061 aa7.28□□□□□ -1.24
SCARNA6.1-201ENST00000516989 KCNA3P22001 575 aa7.28□□□□□ -1.24
SCARNA6.1-201ENST00000516989 ALDH1B1P30837 517 aa7.28□□□□□ -1.24
SCARNA6.1-201ENST00000516989 PTK2Q05397 1052 aa7.28□□□□□ -1.24
SCARNA6.1-201ENST00000516989 DALRD3Q5D0E6 543 aaKnown RBP7.28□□□□□ -1.24
SCARNA6.1-201ENST00000516989 DDX46Q7L014 1031 aaKnown RBP7.28□□□□□ -1.24
SCARNA6.1-201ENST00000516989 PLEKHM2Q8IWE5 1019 aa7.28□□□□□ -1.24
SCARNA6.1-201ENST00000516989 DZIP1LQ8IYY4 767 aaKnown RBP7.28□□□□□ -1.24
SCARNA6.1-201ENST00000516989 DEPDC4Q8N2C3 294 aa7.28□□□□□ -1.24
SCARNA6.1-201ENST00000516989 TTLL6Q8N841 843 aa7.28□□□□□ -1.24
SCARNA6.1-201ENST00000516989 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.28□□□□□ -1.24
SCARNA6.1-201ENST00000516989 FAM174AQ8TBP5 190 aa7.28□□□□□ -1.24
SCARNA6.1-201ENST00000516989 RBM17Q96I25 401 aaKnown RBP7.28□□□□□ -1.24
SCARNA6.1-201ENST00000516989 EVA1BQ9NVM1 165 aa7.28□□□□□ -1.24
SCARNA6.1-201ENST00000516989 CEP126Q9P2H0 1117 aa7.28□□□□□ -1.24
SCARNA6.1-201ENST00000516989 CHMP3Q9Y3E7 222 aa7.28□□□□□ -1.24
SCARNA6.1-201ENST00000516989 NUP98P52948 1817 aa7.28□□□□□ -1.24
SCARNA6.1-201ENST00000516989 RNF123Q5XPI4 1314 aa7.27□□□□□ -1.24
SCARNA6.1-201ENST00000516989 KLRG2A4D1S0 409 aaPredicted RBP7.27□□□□□ -1.25
SCARNA6.1-201ENST00000516989 GRM8O00222 908 aa7.27□□□□□ -1.25
SCARNA6.1-201ENST00000516989 NBPF7P0C2Y1 421 aaPredicted RBP7.27□□□□□ -1.25
SCARNA6.1-201ENST00000516989 TMEM164Q5U3C3 297 aa7.27□□□□□ -1.25
SCARNA6.1-201ENST00000516989 STYK1Q6J9G0 422 aa7.27□□□□□ -1.25
SCARNA6.1-201ENST00000516989 TMEM57Q8N5G2 664 aa7.27□□□□□ -1.25
SCARNA6.1-201ENST00000516989 FAM160A2Q8N612 972 aaPredicted RBP7.27□□□□□ -1.25
SCARNA6.1-201ENST00000516989 ARMC2Q8NEN0 867 aa7.27□□□□□ -1.25
SCARNA6.1-201ENST00000516989 PANK1Q8TE04 598 aa7.27□□□□□ -1.25
SCARNA6.1-201ENST00000516989 STK32AQ8WU08 396 aa7.27□□□□□ -1.25
SCARNA6.1-201ENST00000516989 USP44Q9H0E7 712 aa7.27□□□□□ -1.25
SCARNA6.1-201ENST00000516989 ZMIZ1Q9ULJ6 1067 aa7.27□□□□□ -1.25
SCARNA6.1-201ENST00000516989 NOVA2Q9UNW9 492 aaKnown RBP7.27□□□□□ -1.25
SCARNA6.1-201ENST00000516989 GPSM3Q9Y4H4 160 aa7.27□□□□□ -1.25
SCARNA6.1-201ENST00000516989 ABCC12Q96J65 1359 aa7.27□□□□□ -1.25
SCARNA6.1-201ENST00000516989 IBTKQ9P2D0 1353 aaPredicted RBP7.27□□□□□ -1.25
SCARNA6.1-201ENST00000516989 C10orf71Q711Q0 1435 aa7.27□□□□□ -1.25
SCARNA6.1-201ENST00000516989 CDHR2Q9BYE9 1310 aa7.27□□□□□ -1.25
SCARNA6.1-201ENST00000516989 CACNA1FO60840 1977 aa7.26□□□□□ -1.25
SCARNA6.1-201ENST00000516989 SCN7AQ01118 1682 aa7.26□□□□□ -1.25
SCARNA6.1-201ENST00000516989 CCNYL3P0C7X3 344 aa7.26□□□□□ -1.25
SCARNA6.1-201ENST00000516989 CASP7P55210 303 aa7.26□□□□□ -1.25
SCARNA6.1-201ENST00000516989 KCNH2Q12809 1159 aa7.26□□□□□ -1.25
SCARNA6.1-201ENST00000516989 SF3B3Q15393 1217 aaKnown RBP7.26□□□□□ -1.25
SCARNA6.1-201ENST00000516989 SLFNL1Q499Z3 407 aa7.26□□□□□ -1.25
SCARNA6.1-201ENST00000516989 CCDC152Q4G0S7 254 aa7.26□□□□□ -1.25
SCARNA6.1-201ENST00000516989 INTS3Q68E01 1043 aaKnown RBP7.26□□□□□ -1.25
SCARNA6.1-201ENST00000516989 B4GALNT3Q6L9W6 998 aa7.26□□□□□ -1.25
SCARNA6.1-201ENST00000516989 PDXDC2PQ6P474 469 aa7.26□□□□□ -1.25
SCARNA6.1-201ENST00000516989 ARHGAP27Q6ZUM4 889 aa7.26□□□□□ -1.25
SCARNA6.1-201ENST00000516989 ITPRIPQ8IWB1 547 aa7.26□□□□□ -1.25
SCARNA6.1-201ENST00000516989 WNT2BQ93097 391 aa7.26□□□□□ -1.25
SCARNA6.1-201ENST00000516989 TMX4Q9H1E5 349 aaPredicted RBP7.26□□□□□ -1.25
SCARNA6.1-201ENST00000516989 MKRN1Q9UHC7 482 aaKnown RBP7.26□□□□□ -1.25
SCARNA6.1-201ENST00000516989 HDAC5Q9UQL6 1122 aa7.26□□□□□ -1.25
SCARNA6.1-201ENST00000516989 BCORQ6W2J9 1755 aa7.25□□□□□ -1.25
SCARNA6.1-201ENST00000516989 C21orf2O43822 256 aa7.25□□□□□ -1.25
SCARNA6.1-201ENST00000516989 GRIN3BO60391 1043 aa7.25□□□□□ -1.25
SCARNA6.1-201ENST00000516989 BBOX1O75936 387 aa7.25□□□□□ -1.25
SCARNA6.1-201ENST00000516989 DXOO77932 396 aaKnown RBP7.25□□□□□ -1.25
SCARNA6.1-201ENST00000516989 UBTFL1P0CB47 393 aaPredicted RBP7.25□□□□□ -1.25
SCARNA6.1-201ENST00000516989 RLBP1P12271 317 aa7.25□□□□□ -1.25
SCARNA6.1-201ENST00000516989 YBX3P16989 372 aaKnown RBP eCLIP7.25□□□□□ -1.25
SCARNA6.1-201ENST00000516989 HOXA10P31260 410 aaPredicted RBP7.25□□□□□ -1.25
SCARNA6.1-201ENST00000516989 RBM25P49756 843 aaKnown RBP7.25□□□□□ -1.25
SCARNA6.1-201ENST00000516989 MCCD1P59942 119 aaPredicted RBP7.25□□□□□ -1.25
SCARNA6.1-201ENST00000516989 RPS8P62241 208 aaKnown RBP7.25□□□□□ -1.25
SCARNA6.1-201ENST00000516989 CRY2Q49AN0 593 aa7.25□□□□□ -1.25
SCARNA6.1-201ENST00000516989 MSS51Q4VC12 460 aa7.25□□□□□ -1.25
SCARNA6.1-201ENST00000516989 EPHA10Q5JZY3 1008 aa7.25□□□□□ -1.25
SCARNA6.1-201ENST00000516989 LHX8Q68G74 356 aa7.25□□□□□ -1.25
SCARNA6.1-201ENST00000516989 LMBR1LQ6UX01 489 aa7.25□□□□□ -1.25
SCARNA6.1-201ENST00000516989 SND1Q7KZF4 910 aaKnown RBP eCLIP7.25□□□□□ -1.25
SCARNA6.1-201ENST00000516989 TTLL11Q8NHH1 800 aa7.25□□□□□ -1.25
SCARNA6.1-201ENST00000516989 ZNF592Q92610 1267 aa7.25□□□□□ -1.25
SCARNA6.1-201ENST00000516989 CELF1Q92879 486 aaKnown RBP7.25□□□□□ -1.25
SCARNA6.1-201ENST00000516989 FAM163AQ96GL9 167 aaPredicted RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms