RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 LAMB1P07942 1786 aa13.04□□□□□ -0.32
HMGXB3-205ENST00000514469 IL15P40933 162 aaPredicted RBP13.03□□□□□ -0.32
HMGXB3-205ENST00000514469 TNFAIP1Q13829 316 aa13.03□□□□□ -0.32
HMGXB3-205ENST00000514469 PRKG1Q13976 671 aa13.03□□□□□ -0.32
HMGXB3-205ENST00000514469 ATP2B3Q16720 1220 aa13.03□□□□□ -0.32
HMGXB3-205ENST00000514469 ANGEL1Q9UNK9 670 aaKnown RBP13.03□□□□□ -0.32
HMGXB3-205ENST00000514469 FZD1Q9UP38 647 aa13.03□□□□□ -0.32
HMGXB3-205ENST00000514469 PA2G4Q9UQ80 394 aaKnown RBP13.03□□□□□ -0.32
HMGXB3-205ENST00000514469 SUGT1Q9Y2Z0 365 aa13.03□□□□□ -0.32
HMGXB3-205ENST00000514469 MYH13Q9UKX3 1938 aa13.02□□□□□ -0.32
HMGXB3-205ENST00000514469 ZBTB22O15209 634 aa13.02□□□□□ -0.33
HMGXB3-205ENST00000514469 RASA3Q14644 834 aa13.02□□□□□ -0.33
HMGXB3-205ENST00000514469 SUPT20HL1Q3ZLR7 823 aa13.02□□□□□ -0.33
HMGXB3-205ENST00000514469 FRAT1Q92837 279 aaPredicted RBP13.02□□□□□ -0.33
HMGXB3-205ENST00000514469 TDRD3Q9H7E2 651 aaKnown RBP13.02□□□□□ -0.33
HMGXB3-205ENST00000514469 CEP126Q9P2H0 1117 aa13.02□□□□□ -0.33
HMGXB3-205ENST00000514469 MAST3O60307 1309 aa13.02□□□□□ -0.33
HMGXB3-205ENST00000514469 ZBED9Q6R2W3 1325 aa13.02□□□□□ -0.33
HMGXB3-205ENST00000514469 UNCXA6NJT0 531 aa13.01□□□□□ -0.33
HMGXB3-205ENST00000514469 SRGAP3O43295 1099 aa13.01□□□□□ -0.33
HMGXB3-205ENST00000514469 TRPA1O75762 1119 aa13.01□□□□□ -0.33
HMGXB3-205ENST00000514469 NBPF12Q5TAG4 269 aaPredicted RBP13.01□□□□□ -0.33
HMGXB3-205ENST00000514469 WDR66Q8TBY9 1149 aa13.01□□□□□ -0.33
HMGXB3-205ENST00000514469 TEKT1Q969V4 418 aa13.01□□□□□ -0.33
HMGXB3-205ENST00000514469 ABHD8Q96I13 439 aa13.01□□□□□ -0.33
HMGXB3-205ENST00000514469 ZDHHC15Q96MV8 337 aa13.01□□□□□ -0.33
HMGXB3-205ENST00000514469 TEPSINQ96N21 525 aa13.01□□□□□ -0.33
HMGXB3-205ENST00000514469 MRIQ9BWK5 157 aa13.01□□□□□ -0.33
HMGXB3-205ENST00000514469 OTOFQ9HC10 1997 aa13.01□□□□□ -0.33
HMGXB3-205ENST00000514469 PPP1R12BO60237 982 aaPredicted RBP13□□□□□ -0.33
HMGXB3-205ENST00000514469 TM4SF4P48230 202 aa13□□□□□ -0.33
HMGXB3-205ENST00000514469 SPRYD7Q5W111 196 aa13□□□□□ -0.33
HMGXB3-205ENST00000514469 ZKSCAN2Q63HK3 967 aa13□□□□□ -0.33
HMGXB3-205ENST00000514469 CLUAP1Q96AJ1 413 aa13□□□□□ -0.33
HMGXB3-205ENST00000514469 RPAP1Q9BWH6 1393 aaPredicted RBP12.99□□□□□ -0.33
HMGXB3-205ENST00000514469 SALL1Q9NSC2 1324 aa12.99□□□□□ -0.33
HMGXB3-205ENST00000514469 TCP10L2B9ZVM9 353 aa12.99□□□□□ -0.33
HMGXB3-205ENST00000514469 SEMA3EO15041 775 aa12.99□□□□□ -0.33
HMGXB3-205ENST00000514469 GNAI2P04899 355 aa12.99□□□□□ -0.33
HMGXB3-205ENST00000514469 PHKA1P46020 1223 aa12.99□□□□□ -0.33
HMGXB3-205ENST00000514469 IREB2P48200 963 aaKnown RBP12.99□□□□□ -0.33
HMGXB3-205ENST00000514469 SREBF2Q12772 1141 aa12.99□□□□□ -0.33
HMGXB3-205ENST00000514469 MKRN3Q13064 507 aaKnown RBP12.99□□□□□ -0.33
HMGXB3-205ENST00000514469 APOBEC3HQ6NTF7 200 aaKnown RBP12.99□□□□□ -0.33
HMGXB3-205ENST00000514469 HHIPL2Q6UWX4 724 aa12.99□□□□□ -0.33
HMGXB3-205ENST00000514469 CDAN1Q8IWY9 1227 aa12.99□□□□□ -0.33
HMGXB3-205ENST00000514469 TMEM57Q8N5G2 664 aa12.99□□□□□ -0.33
HMGXB3-205ENST00000514469 CLMNQ96JQ2 1002 aa12.99□□□□□ -0.33
HMGXB3-205ENST00000514469 TMEM39BQ9GZU3 492 aa12.99□□□□□ -0.33
HMGXB3-205ENST00000514469 AKAP11Q9UKA4 1901 aa12.99□□□□□ -0.33
HMGXB3-205ENST00000514469 PDS5AQ29RF7 1337 aaKnown RBP12.98□□□□□ -0.33
HMGXB3-205ENST00000514469 USP2O75604 605 aaPredicted RBP12.98□□□□□ -0.33
HMGXB3-205ENST00000514469 ZBTB48P10074 688 aaPredicted RBP12.98□□□□□ -0.33
HMGXB3-205ENST00000514469 ADORA1P30542 326 aa12.98□□□□□ -0.33
HMGXB3-205ENST00000514469 TNNI2P48788 182 aa12.98□□□□□ -0.33
HMGXB3-205ENST00000514469 WNK4Q96J92 1243 aa12.98□□□□□ -0.33
HMGXB3-205ENST00000514469 MCOLN1Q9GZU1 580 aa12.98□□□□□ -0.33
HMGXB3-205ENST00000514469 GNL3LQ9NVN8 582 aaKnown RBP12.98□□□□□ -0.33
HMGXB3-205ENST00000514469 DENND2AQ9ULE3 1009 aa12.98□□□□□ -0.33
HMGXB3-205ENST00000514469 PRDX5P30044 214 aa12.97□□□□□ -0.33
HMGXB3-205ENST00000514469 CACNB3P54284 484 aa12.97□□□□□ -0.33
HMGXB3-205ENST00000514469 TFCP2Q12800 502 aa12.97□□□□□ -0.33
HMGXB3-205ENST00000514469 FKBP1CQ5VVH2 108 aa12.97□□□□□ -0.33
HMGXB3-205ENST00000514469 CCDC102BQ68D86 513 aa12.97□□□□□ -0.33
HMGXB3-205ENST00000514469 FAM83AQ86UY5 434 aa12.97□□□□□ -0.33
HMGXB3-205ENST00000514469 ANKRD13AQ8IZ07 590 aa12.97□□□□□ -0.33
HMGXB3-205ENST00000514469 SLC10A4Q96EP9 437 aa12.97□□□□□ -0.33
HMGXB3-205ENST00000514469 CFHR5Q9BXR6 569 aa12.97□□□□□ -0.33
HMGXB3-205ENST00000514469 PNMA6EA0A0J9YXQ4 647 aa12.96□□□□□ -0.33
HMGXB3-205ENST00000514469 A0A1B0GUL7 405 aa12.96□□□□□ -0.33
HMGXB3-205ENST00000514469 MANSC4A6NHS7 340 aaPredicted RBP12.96□□□□□ -0.33
HMGXB3-205ENST00000514469 GJA5P36382 358 aa12.96□□□□□ -0.33
HMGXB3-205ENST00000514469 DGKZQ13574 1117 aa12.96□□□□□ -0.33
HMGXB3-205ENST00000514469 RASGRF1Q13972 1273 aa12.96□□□□□ -0.33
HMGXB3-205ENST00000514469 TMOD2Q9NZR1 351 aa12.96□□□□□ -0.33
HMGXB3-205ENST00000514469 AKAP2Q9Y2D5 859 aa12.96□□□□□ -0.33
HMGXB3-205ENST00000514469 DAGLAQ9Y4D2 1042 aa12.96□□□□□ -0.33
HMGXB3-205ENST00000514469 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.96□□□□□ -0.33
HMGXB3-205ENST00000514469 TBC1D8O95759 1140 aa12.95□□□□□ -0.34
HMGXB3-205ENST00000514469 LDHBP07195 334 aaKnown RBP12.95□□□□□ -0.34
HMGXB3-205ENST00000514469 RLBP1P12271 317 aa12.95□□□□□ -0.34
HMGXB3-205ENST00000514469 TIMM10P62072 90 aa12.95□□□□□ -0.34
HMGXB3-205ENST00000514469 POLA2Q14181 598 aa12.95□□□□□ -0.34
HMGXB3-205ENST00000514469 DIXDC1Q155Q3 683 aa12.95□□□□□ -0.34
HMGXB3-205ENST00000514469 NOM1Q5C9Z4 860 aaKnown RBP12.95□□□□□ -0.34
HMGXB3-205ENST00000514469 FTSJ3Q8IY81 847 aaKnown RBP12.95□□□□□ -0.34
HMGXB3-205ENST00000514469 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.95□□□□□ -0.34
HMGXB3-205ENST00000514469 XAGE2Q96GT9 111 aa12.95□□□□□ -0.34
HMGXB3-205ENST00000514469 RFX7Q2KHR2 1363 aa12.94□□□□□ -0.34
HMGXB3-205ENST00000514469 CASP8AP2Q9UKL3 1982 aa12.94□□□□□ -0.34
HMGXB3-205ENST00000514469 INHBEP58166 350 aa12.94□□□□□ -0.34
HMGXB3-205ENST00000514469 VGLL4Q14135 290 aa12.94□□□□□ -0.34
HMGXB3-205ENST00000514469 MVPQ14764 893 aaKnown RBP12.94□□□□□ -0.34
HMGXB3-205ENST00000514469 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.94□□□□□ -0.34
HMGXB3-205ENST00000514469 ZGPATQ8N5A5 531 aaKnown RBP12.94□□□□□ -0.34
HMGXB3-205ENST00000514469 ELP3Q9H9T3 547 aa12.94□□□□□ -0.34
HMGXB3-205ENST00000514469 GAKO14976 1311 aa12.93□□□□□ -0.34
HMGXB3-205ENST00000514469 IGF2BP3O00425 579 aaKnown RBP eCLIP12.93□□□□□ -0.34
HMGXB3-205ENST00000514469 ALDH1A1P00352 501 aa12.93□□□□□ -0.34
HMGXB3-205ENST00000514469 CDC42EP5Q6NZY7 148 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms