RNA–Protein interactions for RNA: ENST00000514387.6

GPBP1-208, Transcript of GC-rich promoter binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPBP1, Length 3,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPBP1-208ENST00000514387 CHMP3Q9Y3E7 222 aa10.09□□□□□ -0.79
GPBP1-208ENST00000514387 MAP2P11137 1827 aaKnown RBP10.09□□□□□ -0.79
GPBP1-208ENST00000514387 ERLIN2O94905 339 aa10.09□□□□□ -0.79
GPBP1-208ENST00000514387 POLA2Q14181 598 aa10.09□□□□□ -0.79
GPBP1-208ENST00000514387 XRN1Q8IZH2 1706 aaKnown RBP10.08□□□□□ -0.8
GPBP1-208ENST00000514387 H7C1W4 665 aa10.08□□□□□ -0.8
GPBP1-208ENST00000514387 KIF3BO15066 747 aa10.08□□□□□ -0.8
GPBP1-208ENST00000514387 STX10O60499 249 aa10.08□□□□□ -0.8
GPBP1-208ENST00000514387 NLRP12P59046 1061 aa10.08□□□□□ -0.8
GPBP1-208ENST00000514387 GNL2Q13823 731 aaKnown RBP10.08□□□□□ -0.8
GPBP1-208ENST00000514387 OGFOD1Q8N543 542 aa10.08□□□□□ -0.8
GPBP1-208ENST00000514387 PIK3R5Q8WYR1 880 aa10.08□□□□□ -0.8
GPBP1-208ENST00000514387 SLC4A2P04920 1241 aa10.08□□□□□ -0.8
GPBP1-208ENST00000514387 AP1ARQ63HQ0 302 aa10.08□□□□□ -0.8
GPBP1-208ENST00000514387 BLOC1S2Q6QNY1 142 aa10.08□□□□□ -0.8
GPBP1-208ENST00000514387 MICALL1Q8N3F8 863 aa10.08□□□□□ -0.8
GPBP1-208ENST00000514387 ZNF483Q8TF39 744 aaPredicted RBP10.08□□□□□ -0.8
GPBP1-208ENST00000514387 IFNKQ9P0W0 207 aa10.08□□□□□ -0.8
GPBP1-208ENST00000514387 TFIP11Q9UBB9 837 aaKnown RBP10.08□□□□□ -0.8
GPBP1-208ENST00000514387 PTPRMP28827 1452 aa10.08□□□□□ -0.8
GPBP1-208ENST00000514387 VWA3AA6NCI4 1184 aa10.07□□□□□ -0.8
GPBP1-208ENST00000514387 SMAPO00193 183 aa10.07□□□□□ -0.8
GPBP1-208ENST00000514387 LARP1Q6PKG0 1096 aaKnown RBP10.07□□□□□ -0.8
GPBP1-208ENST00000514387 GPATCH3Q96I76 525 aa10.07□□□□□ -0.8
GPBP1-208ENST00000514387 IL25Q9H293 177 aa10.07□□□□□ -0.8
GPBP1-208ENST00000514387 PDE11AQ9HCR9 933 aa10.07□□□□□ -0.8
GPBP1-208ENST00000514387 PPP2R2CQ9Y2T4 447 aa10.07□□□□□ -0.8
GPBP1-208ENST00000514387 SHOX2O60902 331 aaPredicted RBP10.07□□□□□ -0.8
GPBP1-208ENST00000514387 RPS6KB1P23443 525 aa10.07□□□□□ -0.8
GPBP1-208ENST00000514387 IFT88Q13099 833 aa10.07□□□□□ -0.8
GPBP1-208ENST00000514387 APBB1IPQ7Z5R6 666 aaPredicted RBP10.07□□□□□ -0.8
GPBP1-208ENST00000514387 MAP4K1Q92918 833 aa10.07□□□□□ -0.8
GPBP1-208ENST00000514387 TRPV5Q9NQA5 729 aa10.07□□□□□ -0.8
GPBP1-208ENST00000514387 IRAK4Q9NWZ3 460 aa10.07□□□□□ -0.8
GPBP1-208ENST00000514387 AKAP2Q9Y2D5 859 aa10.07□□□□□ -0.8
GPBP1-208ENST00000514387 ERCC6L2Q5T890 1561 aa10.07□□□□□ -0.8
GPBP1-208ENST00000514387 EDC4Q6P2E9 1401 aaKnown RBP10.07□□□□□ -0.8
GPBP1-208ENST00000514387 PAX3P23760 479 aa10.07□□□□□ -0.8
GPBP1-208ENST00000514387 TRPC1P48995 793 aa10.07□□□□□ -0.8
GPBP1-208ENST00000514387 CHMP4BP1P59074 171 aa10.07□□□□□ -0.8
GPBP1-208ENST00000514387 CREB3L3Q68CJ9 461 aa10.07□□□□□ -0.8
GPBP1-208ENST00000514387 FERMT3Q86UX7 667 aa10.07□□□□□ -0.8
GPBP1-208ENST00000514387 KIAA1468Q9P260 1216 aa10.07□□□□□ -0.8
GPBP1-208ENST00000514387 DLC1Q96QB1 1528 aa10.06□□□□□ -0.8
GPBP1-208ENST00000514387 RTN2O75298 545 aa10.06□□□□□ -0.8
GPBP1-208ENST00000514387 KIF4BQ2VIQ3 1234 aa10.06□□□□□ -0.8
GPBP1-208ENST00000514387 TMEM132EQ6IEE7 984 aa10.06□□□□□ -0.8
GPBP1-208ENST00000514387 NBPF15Q8N660 670 aa10.06□□□□□ -0.8
GPBP1-208ENST00000514387 RHPN1Q8TCX5 695 aa10.06□□□□□ -0.8
GPBP1-208ENST00000514387 AFAP1L1Q8TED9 768 aa10.06□□□□□ -0.8
GPBP1-208ENST00000514387 KIFC2Q96AC6 838 aa10.06□□□□□ -0.8
GPBP1-208ENST00000514387 EVI5LQ96CN4 794 aa10.06□□□□□ -0.8
GPBP1-208ENST00000514387 IRF2BPLQ9H1B7 796 aa10.06□□□□□ -0.8
GPBP1-208ENST00000514387 UTP6Q9NYH9 597 aaKnown RBP10.06□□□□□ -0.8
GPBP1-208ENST00000514387 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.06□□□□□ -0.8
GPBP1-208ENST00000514387 JCADQ9P266 1359 aa10.06□□□□□ -0.8
GPBP1-208ENST00000514387 H3BQV1 296 aa10.06□□□□□ -0.8
GPBP1-208ENST00000514387 CDKL5O76039 1030 aa10.06□□□□□ -0.8
GPBP1-208ENST00000514387 HMOX1P09601 288 aa10.06□□□□□ -0.8
GPBP1-208ENST00000514387 PRPHP41219 470 aa10.06□□□□□ -0.8
GPBP1-208ENST00000514387 FANCCQ00597 558 aa10.06□□□□□ -0.8
GPBP1-208ENST00000514387 IFFO2Q5TF58 517 aa10.06□□□□□ -0.8
GPBP1-208ENST00000514387 KLHL10Q6JEL2 608 aa10.06□□□□□ -0.8
GPBP1-208ENST00000514387 PRPF40BQ6NWY9 871 aaKnown RBP10.06□□□□□ -0.8
GPBP1-208ENST00000514387 WDR93Q6P2C0 686 aa10.06□□□□□ -0.8
GPBP1-208ENST00000514387 GBP6Q6ZN66 633 aa10.06□□□□□ -0.8
GPBP1-208ENST00000514387 VSTM4Q8IW00 320 aa10.06□□□□□ -0.8
GPBP1-208ENST00000514387 SAMD3Q8N6K7 520 aa10.06□□□□□ -0.8
GPBP1-208ENST00000514387 CNNM3Q8NE01 707 aa10.06□□□□□ -0.8
GPBP1-208ENST00000514387 MRPS27Q92552 414 aaKnown RBP10.06□□□□□ -0.8
GPBP1-208ENST00000514387 STK31Q9BXU1 1019 aa10.06□□□□□ -0.8
GPBP1-208ENST00000514387 CDC23Q9UJX2 597 aa10.06□□□□□ -0.8
GPBP1-208ENST00000514387 ABCC6O95255 1503 aa10.06□□□□□ -0.8
GPBP1-208ENST00000514387 CRB1P82279 1406 aa10.06□□□□□ -0.8
GPBP1-208ENST00000514387 CUTAO60888 179 aa10.05□□□□□ -0.8
GPBP1-208ENST00000514387 GNG11P61952 73 aa10.05□□□□□ -0.8
GPBP1-208ENST00000514387 PSMC1P62191 440 aaKnown RBP10.05□□□□□ -0.8
GPBP1-208ENST00000514387 FOXD4Q12950 439 aaPredicted RBP10.05□□□□□ -0.8
GPBP1-208ENST00000514387 MCM6Q14566 821 aa10.05□□□□□ -0.8
GPBP1-208ENST00000514387 TSHZ3Q63HK5 1081 aa10.05□□□□□ -0.8
GPBP1-208ENST00000514387 ADALQ6DHV7 355 aa10.05□□□□□ -0.8
GPBP1-208ENST00000514387 KCNV1Q6PIU1 500 aa10.05□□□□□ -0.8
GPBP1-208ENST00000514387 SMARCC2Q8TAQ2 1214 aa10.05□□□□□ -0.8
GPBP1-208ENST00000514387 POLR3CQ9BUI4 534 aaPredicted RBP10.05□□□□□ -0.8
GPBP1-208ENST00000514387 FAN1Q9Y2M0 1017 aa10.05□□□□□ -0.8
GPBP1-208ENST00000514387 HNRNPH1P31943 449 aaKnown RBP10.05□□□□□ -0.8
GPBP1-208ENST00000514387 ADD1P35611 737 aaKnown RBP10.05□□□□□ -0.8
GPBP1-208ENST00000514387 MNAT1P51948 309 aa10.05□□□□□ -0.8
GPBP1-208ENST00000514387 PIP4K2BP78356 416 aa10.05□□□□□ -0.8
GPBP1-208ENST00000514387 FMR1NBQ8N0W7 255 aaPredicted RBP10.05□□□□□ -0.8
GPBP1-208ENST00000514387 NECAB1Q8N987 351 aa10.05□□□□□ -0.8
GPBP1-208ENST00000514387 GNL3LQ9NVN8 582 aaKnown RBP10.05□□□□□ -0.8
GPBP1-208ENST00000514387 BABAM1Q9NWV8 329 aa10.05□□□□□ -0.8
GPBP1-208ENST00000514387 PNMA6EA0A0J9YXQ4 647 aa10.05□□□□□ -0.8
GPBP1-208ENST00000514387 EBAG9O00559 213 aa10.05□□□□□ -0.8
GPBP1-208ENST00000514387 MCCD1P59942 119 aaPredicted RBP10.05□□□□□ -0.8
GPBP1-208ENST00000514387 NEDD9Q14511 834 aa10.05□□□□□ -0.8
GPBP1-208ENST00000514387 WHAMMP3Q1A5X7 153 aa10.05□□□□□ -0.8
GPBP1-208ENST00000514387 FILIP1LQ4L180 1135 aa10.05□□□□□ -0.8
GPBP1-208ENST00000514387 TEX11Q8IYF3 940 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 372.5 ms