RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 SMIM5Q71RC9 77 aa20.79■□□□□ 0.92
SFXN1-208ENST00000507823 CHST3Q7LGC8 479 aa20.79■□□□□ 0.92
SFXN1-208ENST00000507823 RALYLQ86SE5 291 aaKnown RBP20.79■□□□□ 0.92
SFXN1-208ENST00000507823 CELF1Q92879 486 aaKnown RBP20.79■□□□□ 0.92
SFXN1-208ENST00000507823 EPB41L4AQ9HCS5 686 aaPredicted RBP20.79■□□□□ 0.92
SFXN1-208ENST00000507823 COL1A1P02452 1464 aaPredicted RBP20.79■□□□□ 0.92
SFXN1-208ENST00000507823 TTC6Q86TZ1 520 aa20.78■□□□□ 0.92
SFXN1-208ENST00000507823 NLRP3Q96P20 1036 aa20.78■□□□□ 0.92
SFXN1-208ENST00000507823 SCAND2PQ9GZW5 306 aaPredicted RBP20.78■□□□□ 0.92
SFXN1-208ENST00000507823 HPS5Q9UPZ3 1129 aa20.78■□□□□ 0.92
SFXN1-208ENST00000507823 CACNA1SQ13698 1873 aa20.78■□□□□ 0.92
SFXN1-208ENST00000507823 LETM1O95202 739 aaPredicted RBP20.78■□□□□ 0.92
SFXN1-208ENST00000507823 TPTE2Q6XPS3 522 aa20.78■□□□□ 0.92
SFXN1-208ENST00000507823 BICDL1Q6ZP65 573 aa20.78■□□□□ 0.92
SFXN1-208ENST00000507823 FAM184AQ8NB25 1140 aa20.78■□□□□ 0.92
SFXN1-208ENST00000507823 BCL11BQ9C0K0 894 aaPredicted RBP20.78■□□□□ 0.92
SFXN1-208ENST00000507823 GNL3LQ9NVN8 582 aaKnown RBP20.78■□□□□ 0.92
SFXN1-208ENST00000507823 MBD4O95243 580 aa20.77■□□□□ 0.92
SFXN1-208ENST00000507823 FERMT3Q86UX7 667 aa20.77■□□□□ 0.92
SFXN1-208ENST00000507823 NBPF5PQ86XG9 351 aaPredicted RBP20.77■□□□□ 0.92
SFXN1-208ENST00000507823 IFNL3Q8IZI9 196 aa20.77■□□□□ 0.92
SFXN1-208ENST00000507823 GPHNQ9NQX3 736 aaPredicted RBP20.77■□□□□ 0.92
SFXN1-208ENST00000507823 SEMA3EO15041 775 aa20.77■□□□□ 0.92
SFXN1-208ENST00000507823 RPS8P62241 208 aaKnown RBP20.77■□□□□ 0.92
SFXN1-208ENST00000507823 FAM182BQ5T319 152 aa20.77■□□□□ 0.92
SFXN1-208ENST00000507823 MEX3CQ5U5Q3 659 aaKnown RBP20.77■□□□□ 0.92
SFXN1-208ENST00000507823 GSG1L2A8MUP6 293 aa20.76■□□□□ 0.91
SFXN1-208ENST00000507823 GTF2E1P29083 439 aaPredicted RBP20.76■□□□□ 0.91
SFXN1-208ENST00000507823 TM4SF1P30408 202 aa20.76■□□□□ 0.91
SFXN1-208ENST00000507823 HSPA1LP34931 641 aa20.76■□□□□ 0.91
SFXN1-208ENST00000507823 FBXO33Q7Z6M2 555 aa20.76■□□□□ 0.91
SFXN1-208ENST00000507823 TNRC6CQ9HCJ0 1690 aaKnown RBP20.76■□□□□ 0.91
SFXN1-208ENST00000507823 ADRA2BP18089 450 aa20.76■□□□□ 0.91
SFXN1-208ENST00000507823 CCT2P78371 535 aaKnown RBP20.76■□□□□ 0.91
SFXN1-208ENST00000507823 CCDC173Q0VFZ6 552 aa20.76■□□□□ 0.91
SFXN1-208ENST00000507823 TRDNQ13061 729 aa20.76■□□□□ 0.91
SFXN1-208ENST00000507823 SEPT12Q8IYM1 358 aa20.76■□□□□ 0.91
SFXN1-208ENST00000507823 DDX11Q96FC9 970 aa20.76■□□□□ 0.91
SFXN1-208ENST00000507823 NCOA5Q9HCD5 579 aaKnown RBP20.76■□□□□ 0.91
SFXN1-208ENST00000507823 UBR3Q6ZT12 1888 aa20.76■□□□□ 0.91
SFXN1-208ENST00000507823 FAM43AQ8N2R8 423 aa20.75■□□□□ 0.91
SFXN1-208ENST00000507823 FAM84BQ96KN1 310 aaPredicted RBP20.75■□□□□ 0.91
SFXN1-208ENST00000507823 SH2B2O14492 632 aaPredicted RBP20.75■□□□□ 0.91
SFXN1-208ENST00000507823 DHX16O60231 1041 aaKnown RBP20.75■□□□□ 0.91
SFXN1-208ENST00000507823 FDPSP14324 419 aaKnown RBP20.75■□□□□ 0.91
SFXN1-208ENST00000507823 TMEM87BQ96K49 555 aa20.75■□□□□ 0.91
SFXN1-208ENST00000507823 ANKRD2Q9GZV1 360 aa20.75■□□□□ 0.91
SFXN1-208ENST00000507823 CARMIL3Q8ND23 1372 aa20.75■□□□□ 0.91
SFXN1-208ENST00000507823 H3BQV1 296 aa20.74■□□□□ 0.91
SFXN1-208ENST00000507823 IFFO2Q5TF58 517 aa20.74■□□□□ 0.91
SFXN1-208ENST00000507823 ARMT1Q9H993 441 aa20.74■□□□□ 0.91
SFXN1-208ENST00000507823 DENND2AQ9ULE3 1009 aa20.74■□□□□ 0.91
SFXN1-208ENST00000507823 ANGEL1Q9UNK9 670 aaKnown RBP20.74■□□□□ 0.91
SFXN1-208ENST00000507823 KLF18A0A0U1RQI7 1052 aa20.74■□□□□ 0.91
SFXN1-208ENST00000507823 APPP05067 770 aa20.74■□□□□ 0.91
SFXN1-208ENST00000507823 GYG1P46976 350 aa20.74■□□□□ 0.91
SFXN1-208ENST00000507823 CAVIN4Q5BKX8 364 aa20.74■□□□□ 0.91
SFXN1-208ENST00000507823 ATL3Q6DD88 541 aa20.74■□□□□ 0.91
SFXN1-208ENST00000507823 FAM173BQ6P4H8 233 aa20.74■□□□□ 0.91
SFXN1-208ENST00000507823 CYB5R4Q7L1T6 521 aa20.74■□□□□ 0.91
SFXN1-208ENST00000507823 LEO1Q8WVC0 666 aaPredicted RBP20.74■□□□□ 0.91
SFXN1-208ENST00000507823 TSPY26PQ9H489 355 aa20.74■□□□□ 0.91
SFXN1-208ENST00000507823 ADD1P35611 737 aaKnown RBP20.74■□□□□ 0.91
SFXN1-208ENST00000507823 TRAPPC3LQ5T215 181 aa20.74■□□□□ 0.91
SFXN1-208ENST00000507823 LCORLQ8N3X6 602 aa20.74■□□□□ 0.91
SFXN1-208ENST00000507823 IRS2Q9Y4H2 1338 aa20.73■□□□□ 0.91
SFXN1-208ENST00000507823 NKX2-3Q8TAU0 364 aa20.73■□□□□ 0.91
SFXN1-208ENST00000507823 MTA3Q9BTC8 594 aa20.73■□□□□ 0.91
SFXN1-208ENST00000507823 NAPBQ9H115 298 aa20.73■□□□□ 0.91
SFXN1-208ENST00000507823 LRP2BPQ9P2M1 347 aa20.73■□□□□ 0.91
SFXN1-208ENST00000507823 TMED8Q6PL24 325 aaPredicted RBP20.73■□□□□ 0.91
SFXN1-208ENST00000507823 SGMS1Q86VZ5 419 aa20.73■□□□□ 0.91
SFXN1-208ENST00000507823 NEDD4P46934 1319 aa20.72■□□□□ 0.91
SFXN1-208ENST00000507823 NID2Q14112 1375 aa20.72■□□□□ 0.91
SFXN1-208ENST00000507823 MYH13Q9UKX3 1938 aa20.72■□□□□ 0.91
SFXN1-208ENST00000507823 IGDCC4Q8TDY8 1250 aa20.72■□□□□ 0.91
SFXN1-208ENST00000507823 STAG1Q8WVM7 1258 aa20.72■□□□□ 0.91
SFXN1-208ENST00000507823 CNNM2Q9H8M5 875 aa20.72■□□□□ 0.91
SFXN1-208ENST00000507823 LRRC4BQ9NT99 713 aa20.72■□□□□ 0.91
SFXN1-208ENST00000507823 WTIPA6NIX2 430 aaPredicted RBP20.72■□□□□ 0.91
SFXN1-208ENST00000507823 GOLGA8BA8MQT2 603 aa20.72■□□□□ 0.91
SFXN1-208ENST00000507823 PDLIM2Q96JY6 352 aa20.72■□□□□ 0.91
SFXN1-208ENST00000507823 NACAP1Q9BZK3 213 aa20.72■□□□□ 0.91
SFXN1-208ENST00000507823 RFC4P35249 363 aa20.71■□□□□ 0.91
SFXN1-208ENST00000507823 LIFRP42702 1097 aa20.71■□□□□ 0.91
SFXN1-208ENST00000507823 FAM196AQ6ZSG2 479 aa20.71■□□□□ 0.91
SFXN1-208ENST00000507823 SPATA32Q96LK8 384 aa20.71■□□□□ 0.91
SFXN1-208ENST00000507823 TACC3Q9Y6A5 838 aa20.71■□□□□ 0.91
SFXN1-208ENST00000507823 MAST2Q6P0Q8 1798 aa20.71■□□□□ 0.91
SFXN1-208ENST00000507823 AKNAD1Q5T1N1 836 aa20.71■□□□□ 0.91
SFXN1-208ENST00000507823 FUCA2Q9BTY2 467 aa20.71■□□□□ 0.91
SFXN1-208ENST00000507823 CFAP45Q9UL16 551 aa20.71■□□□□ 0.91
SFXN1-208ENST00000507823 IGSF3O75054 1194 aa20.7■□□□□ 0.9
SFXN1-208ENST00000507823 RIOK1Q9BRS2 568 aaKnown RBP20.7■□□□□ 0.9
SFXN1-208ENST00000507823 ANAPC4Q9UJX5 808 aa20.7■□□□□ 0.9
SFXN1-208ENST00000507823 SLC4A4Q9Y6R1 1079 aa20.7■□□□□ 0.9
SFXN1-208ENST00000507823 KIAA1551Q9HCM1 1747 aa20.7■□□□□ 0.9
SFXN1-208ENST00000507823 B4E1Z4 1266 aa20.7■□□□□ 0.9
SFXN1-208ENST00000507823 PRKAB2O43741 272 aa20.7■□□□□ 0.9
SFXN1-208ENST00000507823 CYP7A1P22680 504 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms