RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 ZKSCAN2Q63HK3 967 aa11.31□□□□□ -0.6
PDLIM5-209ENST00000506632 FRAT1Q92837 279 aaPredicted RBP11.31□□□□□ -0.6
PDLIM5-209ENST00000506632 SIL1Q9H173 461 aa11.31□□□□□ -0.6
PDLIM5-209ENST00000506632 CEP126Q9P2H0 1117 aa11.31□□□□□ -0.6
PDLIM5-209ENST00000506632 SPDYE4A6NLX3 237 aa11.3□□□□□ -0.6
PDLIM5-209ENST00000506632 CHAF1AQ13111 956 aaPredicted RBP11.3□□□□□ -0.6
PDLIM5-209ENST00000506632 MAP3K11Q16584 847 aa11.3□□□□□ -0.6
PDLIM5-209ENST00000506632 ATP2B3Q16720 1220 aa11.3□□□□□ -0.6
PDLIM5-209ENST00000506632 LDLRAD1Q5T700 205 aa11.3□□□□□ -0.6
PDLIM5-209ENST00000506632 DZIP1LQ8IYY4 767 aaKnown RBP11.3□□□□□ -0.6
PDLIM5-209ENST00000506632 CLUAP1Q96AJ1 413 aa11.3□□□□□ -0.6
PDLIM5-209ENST00000506632 MRIQ9BWK5 157 aa11.3□□□□□ -0.6
PDLIM5-209ENST00000506632 TSKSQ9UJT2 592 aa11.3□□□□□ -0.6
PDLIM5-209ENST00000506632 SUGT1Q9Y2Z0 365 aa11.3□□□□□ -0.6
PDLIM5-209ENST00000506632 U3KPZ7 1027 aaPredicted RBP11.3□□□□□ -0.6
PDLIM5-209ENST00000506632 MYH13Q9UKX3 1938 aa11.3□□□□□ -0.6
PDLIM5-209ENST00000506632 SRGAP3O43295 1099 aa11.29□□□□□ -0.6
PDLIM5-209ENST00000506632 FRAT2O75474 233 aaPredicted RBP11.29□□□□□ -0.6
PDLIM5-209ENST00000506632 PRKCSHP14314 528 aaPredicted RBP11.29□□□□□ -0.6
PDLIM5-209ENST00000506632 CRKP46108 304 aa11.29□□□□□ -0.6
PDLIM5-209ENST00000506632 RBM5P52756 815 aaKnown RBP eCLIP11.29□□□□□ -0.6
PDLIM5-209ENST00000506632 TMEM57Q8N5G2 664 aa11.29□□□□□ -0.6
PDLIM5-209ENST00000506632 CSRNP1Q96S65 589 aa11.29□□□□□ -0.6
PDLIM5-209ENST00000506632 SAGE1Q9NXZ1 904 aa11.29□□□□□ -0.6
PDLIM5-209ENST00000506632 ZNF70Q9UC06 446 aaPredicted RBP11.29□□□□□ -0.6
PDLIM5-209ENST00000506632 GNAI2P04899 355 aa11.28□□□□□ -0.6
PDLIM5-209ENST00000506632 TNFAIP1Q13829 316 aa11.28□□□□□ -0.6
PDLIM5-209ENST00000506632 TTLL12Q14166 644 aaPredicted RBP11.28□□□□□ -0.6
PDLIM5-209ENST00000506632 RASA3Q14644 834 aa11.28□□□□□ -0.6
PDLIM5-209ENST00000506632 ARMC9Q7Z3E5 817 aa11.28□□□□□ -0.6
PDLIM5-209ENST00000506632 REM2Q8IYK8 340 aaPredicted RBP11.28□□□□□ -0.6
PDLIM5-209ENST00000506632 WDR66Q8TBY9 1149 aa11.28□□□□□ -0.6
PDLIM5-209ENST00000506632 ZDHHC15Q96MV8 337 aa11.28□□□□□ -0.6
PDLIM5-209ENST00000506632 TEPSINQ96N21 525 aa11.28□□□□□ -0.6
PDLIM5-209ENST00000506632 TDRD3Q9H7E2 651 aaKnown RBP11.28□□□□□ -0.6
PDLIM5-209ENST00000506632 VEZTQ9HBM0 779 aa11.28□□□□□ -0.6
PDLIM5-209ENST00000506632 MAST3O60307 1309 aa11.28□□□□□ -0.6
PDLIM5-209ENST00000506632 AKAP11Q9UKA4 1901 aa11.27□□□□□ -0.6
PDLIM5-209ENST00000506632 LAMB1P07942 1786 aa11.27□□□□□ -0.61
PDLIM5-209ENST00000506632 PNMA6EA0A0J9YXQ4 647 aa11.27□□□□□ -0.61
PDLIM5-209ENST00000506632 UNCXA6NJT0 531 aa11.27□□□□□ -0.61
PDLIM5-209ENST00000506632 SEMA3EO15041 775 aa11.27□□□□□ -0.61
PDLIM5-209ENST00000506632 RLBP1P12271 317 aa11.27□□□□□ -0.61
PDLIM5-209ENST00000506632 PHKA1P46020 1223 aa11.27□□□□□ -0.61
PDLIM5-209ENST00000506632 VASPP50552 380 aaPredicted RBP11.27□□□□□ -0.61
PDLIM5-209ENST00000506632 PRKG1Q13976 671 aa11.27□□□□□ -0.61
PDLIM5-209ENST00000506632 SUPT20HL1Q3ZLR7 823 aa11.27□□□□□ -0.61
PDLIM5-209ENST00000506632 NBPF12Q5TAG4 269 aaPredicted RBP11.27□□□□□ -0.61
PDLIM5-209ENST00000506632 APOBEC3HQ6NTF7 200 aaKnown RBP11.27□□□□□ -0.61
PDLIM5-209ENST00000506632 TEKT1Q969V4 418 aa11.27□□□□□ -0.61
PDLIM5-209ENST00000506632 RNF186Q9NXI6 227 aa11.27□□□□□ -0.61
PDLIM5-209ENST00000506632 ANGEL1Q9UNK9 670 aaKnown RBP11.27□□□□□ -0.61
PDLIM5-209ENST00000506632 FZD1Q9UP38 647 aa11.27□□□□□ -0.61
PDLIM5-209ENST00000506632 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.27□□□□□ -0.61
PDLIM5-209ENST00000506632 SALL1Q9NSC2 1324 aa11.27□□□□□ -0.61
PDLIM5-209ENST00000506632 CASP8AP2Q9UKL3 1982 aa11.27□□□□□ -0.61
PDLIM5-209ENST00000506632 ADORA1P30542 326 aa11.26□□□□□ -0.61
PDLIM5-209ENST00000506632 TFCP2Q12800 502 aa11.26□□□□□ -0.61
PDLIM5-209ENST00000506632 CCDC102BQ68D86 513 aa11.26□□□□□ -0.61
PDLIM5-209ENST00000506632 HHIPL2Q6UWX4 724 aa11.26□□□□□ -0.61
PDLIM5-209ENST00000506632 CDAN1Q8IWY9 1227 aa11.26□□□□□ -0.61
PDLIM5-209ENST00000506632 PDS5AQ29RF7 1337 aaKnown RBP11.26□□□□□ -0.61
PDLIM5-209ENST00000506632 OTOFQ9HC10 1997 aa11.25□□□□□ -0.61
PDLIM5-209ENST00000506632 A0A1B0GUL7 405 aa11.25□□□□□ -0.61
PDLIM5-209ENST00000506632 PPP1R12BO60237 982 aaPredicted RBP11.25□□□□□ -0.61
PDLIM5-209ENST00000506632 USP2O75604 605 aaPredicted RBP11.25□□□□□ -0.61
PDLIM5-209ENST00000506632 TRPA1O75762 1119 aa11.25□□□□□ -0.61
PDLIM5-209ENST00000506632 PRDX5P30044 214 aa11.25□□□□□ -0.61
PDLIM5-209ENST00000506632 TM4SF4P48230 202 aa11.25□□□□□ -0.61
PDLIM5-209ENST00000506632 TIMM10P62072 90 aa11.25□□□□□ -0.61
PDLIM5-209ENST00000506632 POLA2Q14181 598 aa11.25□□□□□ -0.61
PDLIM5-209ENST00000506632 FKBP1CQ5VVH2 108 aa11.25□□□□□ -0.61
PDLIM5-209ENST00000506632 SPRYD7Q5W111 196 aa11.25□□□□□ -0.61
PDLIM5-209ENST00000506632 SSH3Q8TE77 659 aa11.25□□□□□ -0.61
PDLIM5-209ENST00000506632 CLMNQ96JQ2 1002 aa11.25□□□□□ -0.61
PDLIM5-209ENST00000506632 GNL3LQ9NVN8 582 aaKnown RBP11.25□□□□□ -0.61
PDLIM5-209ENST00000506632 DENND2AQ9ULE3 1009 aa11.25□□□□□ -0.61
PDLIM5-209ENST00000506632 AKAP2Q9Y2D5 859 aa11.25□□□□□ -0.61
PDLIM5-209ENST00000506632 RPAP1Q9BWH6 1393 aaPredicted RBP11.25□□□□□ -0.61
PDLIM5-209ENST00000506632 TCP10L2B9ZVM9 353 aa11.24□□□□□ -0.61
PDLIM5-209ENST00000506632 ZBTB7BO15156 539 aaPredicted RBP11.24□□□□□ -0.61
PDLIM5-209ENST00000506632 TNNI2P48788 182 aa11.24□□□□□ -0.61
PDLIM5-209ENST00000506632 ATP8B2P98198 1209 aa11.24□□□□□ -0.61
PDLIM5-209ENST00000506632 RASGRF1Q13972 1273 aa11.24□□□□□ -0.61
PDLIM5-209ENST00000506632 FAM83AQ86UY5 434 aa11.24□□□□□ -0.61
PDLIM5-209ENST00000506632 FTSJ3Q8IY81 847 aaKnown RBP11.24□□□□□ -0.61
PDLIM5-209ENST00000506632 XAGE2Q96GT9 111 aa11.24□□□□□ -0.61
PDLIM5-209ENST00000506632 TMEM39BQ9GZU3 492 aa11.24□□□□□ -0.61
PDLIM5-209ENST00000506632 DAGLAQ9Y4D2 1042 aa11.24□□□□□ -0.61
PDLIM5-209ENST00000506632 LDHBP07195 334 aaKnown RBP11.23□□□□□ -0.61
PDLIM5-209ENST00000506632 ZBTB48P10074 688 aaPredicted RBP11.23□□□□□ -0.61
PDLIM5-209ENST00000506632 IREB2P48200 963 aaKnown RBP11.23□□□□□ -0.61
PDLIM5-209ENST00000506632 CACNB3P54284 484 aa11.23□□□□□ -0.61
PDLIM5-209ENST00000506632 DIXDC1Q155Q3 683 aa11.23□□□□□ -0.61
PDLIM5-209ENST00000506632 ITPRIPQ8IWB1 547 aa11.23□□□□□ -0.61
PDLIM5-209ENST00000506632 SLC10A4Q96EP9 437 aa11.23□□□□□ -0.61
PDLIM5-209ENST00000506632 ABHD8Q96I13 439 aa11.23□□□□□ -0.61
PDLIM5-209ENST00000506632 WNK4Q96J92 1243 aa11.23□□□□□ -0.61
PDLIM5-209ENST00000506632 CFHR5Q9BXR6 569 aa11.23□□□□□ -0.61
PDLIM5-209ENST00000506632 TAOK2Q9UL54 1235 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms