RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 CCDC80Q76M96 950 aa6.83□□□□□ -1.32
LINC02397-201ENST00000504409 TRIM58Q8NG06 486 aa6.83□□□□□ -1.32
LINC02397-201ENST00000504409 BPIFA3Q9BQP9 254 aa6.83□□□□□ -1.32
LINC02397-201ENST00000504409 LARP6Q9BRS8 491 aaKnown RBP6.83□□□□□ -1.32
LINC02397-201ENST00000504409 SBNO1A3KN83 1393 aa6.83□□□□□ -1.32
LINC02397-201ENST00000504409 SCLT1Q96NL6 688 aa6.83□□□□□ -1.32
LINC02397-201ENST00000504409 TTC37Q6PGP7 1564 aa6.83□□□□□ -1.32
LINC02397-201ENST00000504409 VIMP08670 466 aaKnown RBP6.83□□□□□ -1.32
LINC02397-201ENST00000504409 EVCP57679 992 aa6.83□□□□□ -1.32
LINC02397-201ENST00000504409 TYRO3Q06418 890 aa6.83□□□□□ -1.32
LINC02397-201ENST00000504409 NKIRAS1Q9NYS0 192 aa6.83□□□□□ -1.32
LINC02397-201ENST00000504409 RGS12O14924 1447 aa6.83□□□□□ -1.32
LINC02397-201ENST00000504409 CCDC102BQ68D86 513 aa6.83□□□□□ -1.32
LINC02397-201ENST00000504409 NRBF2Q96F24 287 aa6.83□□□□□ -1.32
LINC02397-201ENST00000504409 CAPS2Q9BXY5 557 aa6.83□□□□□ -1.32
LINC02397-201ENST00000504409 NACAP1Q9BZK3 213 aa6.83□□□□□ -1.32
LINC02397-201ENST00000504409 ADGRL2O95490 1459 aa6.83□□□□□ -1.32
LINC02397-201ENST00000504409 MYO1CO00159 1063 aa6.82□□□□□ -1.32
LINC02397-201ENST00000504409 SWT1Q5T5J6 900 aaKnown RBP6.82□□□□□ -1.32
LINC02397-201ENST00000504409 NUGGCQ68CJ6 796 aa6.82□□□□□ -1.32
LINC02397-201ENST00000504409 HEATR3Q7Z4Q2 680 aa6.82□□□□□ -1.32
LINC02397-201ENST00000504409 ZNF483Q8TF39 744 aaPredicted RBP6.82□□□□□ -1.32
LINC02397-201ENST00000504409 VTI1AQ96AJ9 217 aa6.82□□□□□ -1.32
LINC02397-201ENST00000504409 MAGEF1Q9HAY2 307 aa6.82□□□□□ -1.32
LINC02397-201ENST00000504409 GOLGA8AA7E2F4 631 aa6.82□□□□□ -1.32
LINC02397-201ENST00000504409 GOLGA8BA8MQT2 603 aa6.82□□□□□ -1.32
LINC02397-201ENST00000504409 SYT1P21579 422 aa6.82□□□□□ -1.32
LINC02397-201ENST00000504409 EFCAB2Q5VUJ9 269 aa6.82□□□□□ -1.32
LINC02397-201ENST00000504409 TRIM42Q8IWZ5 723 aa6.82□□□□□ -1.32
LINC02397-201ENST00000504409 IQCA1LA6NCM1 817 aa6.82□□□□□ -1.32
LINC02397-201ENST00000504409 PFDN1O60925 122 aa6.82□□□□□ -1.32
LINC02397-201ENST00000504409 SARM1Q6SZW1 724 aa6.82□□□□□ -1.32
LINC02397-201ENST00000504409 AFAP1L2Q8N4X5 818 aa6.82□□□□□ -1.32
LINC02397-201ENST00000504409 PAF1Q8N7H5 531 aa6.82□□□□□ -1.32
LINC02397-201ENST00000504409 ABCF2Q9UG63 623 aa6.82□□□□□ -1.32
LINC02397-201ENST00000504409 TCEAL9Q9UHQ7 104 aa6.82□□□□□ -1.32
LINC02397-201ENST00000504409 ANGPTL2Q9UKU9 493 aa6.82□□□□□ -1.32
LINC02397-201ENST00000504409 CAMSAP1Q5T5Y3 1602 aa6.82□□□□□ -1.32
LINC02397-201ENST00000504409 CDK13Q14004 1512 aaKnown RBP6.82□□□□□ -1.32
LINC02397-201ENST00000504409 RIOK3O14730 519 aaKnown RBP6.82□□□□□ -1.32
LINC02397-201ENST00000504409 C10orf76Q5T2E6 689 aa6.82□□□□□ -1.32
LINC02397-201ENST00000504409 CCDC13Q8IYE1 715 aa6.82□□□□□ -1.32
LINC02397-201ENST00000504409 ZNF653Q96CK0 615 aa6.82□□□□□ -1.32
LINC02397-201ENST00000504409 NOC2LQ9Y3T9 749 aaKnown RBP6.82□□□□□ -1.32
LINC02397-201ENST00000504409 PTPRGP23470 1445 aa6.82□□□□□ -1.32
LINC02397-201ENST00000504409 PRPF6O94906 941 aaKnown RBP6.82□□□□□ -1.32
LINC02397-201ENST00000504409 MYL1P05976 194 aa6.82□□□□□ -1.32
LINC02397-201ENST00000504409 TMTC2Q8N394 836 aa6.82□□□□□ -1.32
LINC02397-201ENST00000504409 DRC1Q96MC2 740 aa6.82□□□□□ -1.32
LINC02397-201ENST00000504409 NUP88Q99567 741 aaPredicted RBP6.82□□□□□ -1.32
LINC02397-201ENST00000504409 TMCC1O94876 653 aa6.82□□□□□ -1.32
LINC02397-201ENST00000504409 F13A1P00488 732 aa6.82□□□□□ -1.32
LINC02397-201ENST00000504409 TTC22Q5TAA0 569 aa6.82□□□□□ -1.32
LINC02397-201ENST00000504409 KIRREL3Q8IZU9 778 aa6.82□□□□□ -1.32
LINC02397-201ENST00000504409 KIF1BPQ96EK5 621 aa6.82□□□□□ -1.32
LINC02397-201ENST00000504409 TRIM55Q9BYV6 548 aa6.82□□□□□ -1.32
LINC02397-201ENST00000504409 FAM192AQ9GZU8 254 aa6.82□□□□□ -1.32
LINC02397-201ENST00000504409 BABAM1Q9NWV8 329 aa6.82□□□□□ -1.32
LINC02397-201ENST00000504409 PPP1R9AQ9ULJ8 1098 aa6.82□□□□□ -1.32
LINC02397-201ENST00000504409 TTC21AQ8NDW8 1320 aa6.82□□□□□ -1.32
LINC02397-201ENST00000504409 STX10O60499 249 aa6.82□□□□□ -1.32
LINC02397-201ENST00000504409 RNF40O75150 1001 aa6.82□□□□□ -1.32
LINC02397-201ENST00000504409 CROCC2H7BZ55 1655 aa6.82□□□□□ -1.32
LINC02397-201ENST00000504409 PPP2R5AQ15172 486 aa6.82□□□□□ -1.32
LINC02397-201ENST00000504409 RETREG2Q8NC44 543 aa6.82□□□□□ -1.32
LINC02397-201ENST00000504409 MRPS27Q92552 414 aaKnown RBP6.82□□□□□ -1.32
LINC02397-201ENST00000504409 NNTQ13423 1086 aa6.81□□□□□ -1.32
LINC02397-201ENST00000504409 BBOF1Q8ND07 529 aa6.81□□□□□ -1.32
LINC02397-201ENST00000504409 EIF3CQ99613 913 aaKnown RBP6.81□□□□□ -1.32
LINC02397-201ENST00000504409 SCHIP1Q9P0W5 487 aaPredicted RBP6.81□□□□□ -1.32
LINC02397-201ENST00000504409 CCDC169A6NNP5 214 aa6.81□□□□□ -1.32
LINC02397-201ENST00000504409 FAM160A1Q05DH4 1040 aa6.81□□□□□ -1.32
LINC02397-201ENST00000504409 ATRIPQ8WXE1 791 aa6.81□□□□□ -1.32
LINC02397-201ENST00000504409 CCDC69A6NI79 296 aa6.81□□□□□ -1.32
LINC02397-201ENST00000504409 CTIFO43310 598 aaKnown RBP6.81□□□□□ -1.32
LINC02397-201ENST00000504409 HSPA6P17066 643 aa6.81□□□□□ -1.32
LINC02397-201ENST00000504409 CUL1Q13616 776 aa6.81□□□□□ -1.32
LINC02397-201ENST00000504409 P3H3Q8IVL6 736 aa6.81□□□□□ -1.32
LINC02397-201ENST00000504409 ST13P4Q8IZP2 240 aaPredicted RBP6.81□□□□□ -1.32
LINC02397-201ENST00000504409 C10orf88Q9H8K7 445 aa6.81□□□□□ -1.32
LINC02397-201ENST00000504409 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.81□□□□□ -1.32
LINC02397-201ENST00000504409 RAPGEF4Q8WZA2 1011 aa6.81□□□□□ -1.32
LINC02397-201ENST00000504409 EVI5LQ96CN4 794 aa6.81□□□□□ -1.32
LINC02397-201ENST00000504409 ARHGEF10O15013 1369 aa6.81□□□□□ -1.32
LINC02397-201ENST00000504409 EPHB4P54760 987 aa6.81□□□□□ -1.32
LINC02397-201ENST00000504409 NDUFA5Q16718 116 aa6.81□□□□□ -1.32
LINC02397-201ENST00000504409 SBNO2Q9Y2G9 1366 aa6.81□□□□□ -1.32
LINC02397-201ENST00000504409 UBASH3AP57075 661 aa6.81□□□□□ -1.32
LINC02397-201ENST00000504409 HNRNPLLQ8WVV9 542 aaKnown RBP6.81□□□□□ -1.32
LINC02397-201ENST00000504409 THUMPD2Q9BTF0 503 aaKnown RBP6.81□□□□□ -1.32
LINC02397-201ENST00000504409 SCINQ9Y6U3 715 aa6.81□□□□□ -1.32
LINC02397-201ENST00000504409 MAST1Q9Y2H9 1570 aa6.81□□□□□ -1.32
LINC02397-201ENST00000504409 IQCA1Q86XH1 822 aa6.81□□□□□ -1.32
LINC02397-201ENST00000504409 SYNCQ9H7C4 482 aa6.81□□□□□ -1.32
LINC02397-201ENST00000504409 TBC1D2BQ9UPU7 963 aa6.81□□□□□ -1.32
LINC02397-201ENST00000504409 RASSF10A6NK89 507 aa6.81□□□□□ -1.32
LINC02397-201ENST00000504409 CYP2C19P33261 490 aa6.81□□□□□ -1.32
LINC02397-201ENST00000504409 IQUBQ8NA54 791 aa6.81□□□□□ -1.32
LINC02397-201ENST00000504409 CHMP7Q8WUX9 453 aaPredicted RBP6.81□□□□□ -1.32
LINC02397-201ENST00000504409 RPGRQ92834 1020 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms