RNA–Protein interactions for RNA: ENST00000504315.1

HOXC6-203, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-203ENST00000504315 CHAF1AQ13111 956 aaPredicted RBP17■□□□□ 0.31
HOXC6-203ENST00000504315 SPDYE2Q495Y8 402 aa17■□□□□ 0.31
HOXC6-203ENST00000504315 MAST3O60307 1309 aa16.99■□□□□ 0.31
HOXC6-203ENST00000504315 CLRN2A0PK11 232 aa16.99■□□□□ 0.31
HOXC6-203ENST00000504315 RLBP1P12271 317 aa16.99■□□□□ 0.31
HOXC6-203ENST00000504315 RBM5P52756 815 aaKnown RBP eCLIP16.99■□□□□ 0.31
HOXC6-203ENST00000504315 MAP3K11Q16584 847 aa16.99■□□□□ 0.31
HOXC6-203ENST00000504315 MOB2Q70IA6 237 aa16.99■□□□□ 0.31
HOXC6-203ENST00000504315 DZIP1LQ8IYY4 767 aaKnown RBP16.99■□□□□ 0.31
HOXC6-203ENST00000504315 WDR66Q8TBY9 1149 aa16.99■□□□□ 0.31
HOXC6-203ENST00000504315 PNMA6EA0A0J9YXQ4 647 aa16.98■□□□□ 0.31
HOXC6-203ENST00000504315 TNS4Q8IZW8 715 aa16.98■□□□□ 0.31
HOXC6-203ENST00000504315 ZNF70Q9UC06 446 aaPredicted RBP16.98■□□□□ 0.31
HOXC6-203ENST00000504315 MYO5AQ9Y4I1 1855 aaKnown RBP16.98■□□□□ 0.31
HOXC6-203ENST00000504315 SALL1Q9NSC2 1324 aa16.97■□□□□ 0.31
HOXC6-203ENST00000504315 UBE2Q2LH0YL09 131 aa16.97■□□□□ 0.31
HOXC6-203ENST00000504315 SEMA3EO15041 775 aa16.97■□□□□ 0.31
HOXC6-203ENST00000504315 TNFAIP1Q13829 316 aa16.97■□□□□ 0.31
HOXC6-203ENST00000504315 LDLRAD1Q5T700 205 aa16.97■□□□□ 0.31
HOXC6-203ENST00000504315 FTSJ3Q8IY81 847 aaKnown RBP16.97■□□□□ 0.31
HOXC6-203ENST00000504315 REM2Q8IYK8 340 aaPredicted RBP16.97■□□□□ 0.31
HOXC6-203ENST00000504315 TEKT1Q969V4 418 aa16.97■□□□□ 0.31
HOXC6-203ENST00000504315 ZDHHC15Q96MV8 337 aa16.97■□□□□ 0.31
HOXC6-203ENST00000504315 VEZTQ9HBM0 779 aa16.97■□□□□ 0.31
HOXC6-203ENST00000504315 PDS5AQ29RF7 1337 aaKnown RBP16.96■□□□□ 0.31
HOXC6-203ENST00000504315 ZBTB7BO15156 539 aaPredicted RBP16.96■□□□□ 0.31
HOXC6-203ENST00000504315 ADORA1P30542 326 aa16.96■□□□□ 0.31
HOXC6-203ENST00000504315 PHKA1P46020 1223 aa16.96■□□□□ 0.31
HOXC6-203ENST00000504315 KIF23Q02241 960 aaPredicted RBP16.96■□□□□ 0.31
HOXC6-203ENST00000504315 POLA2Q14181 598 aa16.96■□□□□ 0.31
HOXC6-203ENST00000504315 HHIPL2Q6UWX4 724 aa16.96■□□□□ 0.31
HOXC6-203ENST00000504315 ARMC9Q7Z3E5 817 aa16.96■□□□□ 0.31
HOXC6-203ENST00000504315 TDRD3Q9H7E2 651 aaKnown RBP16.96■□□□□ 0.31
HOXC6-203ENST00000504315 GNL3LQ9NVN8 582 aaKnown RBP16.96■□□□□ 0.31
HOXC6-203ENST00000504315 SAGE1Q9NXZ1 904 aa16.96■□□□□ 0.31
HOXC6-203ENST00000504315 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.96■□□□□ 0.31
HOXC6-203ENST00000504315 A0A1B0GUL7 405 aa16.95■□□□□ 0.3
HOXC6-203ENST00000504315 UNCXA6NJT0 531 aa16.95■□□□□ 0.3
HOXC6-203ENST00000504315 TTLL12Q14166 644 aaPredicted RBP16.95■□□□□ 0.3
HOXC6-203ENST00000504315 RASA3Q14644 834 aa16.95■□□□□ 0.3
HOXC6-203ENST00000504315 SUPT20HL1Q3ZLR7 823 aa16.95■□□□□ 0.3
HOXC6-203ENST00000504315 CCDC102BQ68D86 513 aa16.95■□□□□ 0.3
HOXC6-203ENST00000504315 SSH3Q8TE77 659 aa16.95■□□□□ 0.3
HOXC6-203ENST00000504315 DENND2AQ9ULE3 1009 aa16.95■□□□□ 0.3
HOXC6-203ENST00000504315 AKAP2Q9Y2D5 859 aa16.95■□□□□ 0.3
HOXC6-203ENST00000504315 DOCK2Q92608 1830 aa16.94■□□□□ 0.3
HOXC6-203ENST00000504315 ATP8B2P98198 1209 aa16.94■□□□□ 0.3
HOXC6-203ENST00000504315 TFCP2Q12800 502 aa16.94■□□□□ 0.3
HOXC6-203ENST00000504315 NBPF12Q5TAG4 269 aaPredicted RBP16.94■□□□□ 0.3
HOXC6-203ENST00000504315 APOBEC3HQ6NTF7 200 aaKnown RBP16.94■□□□□ 0.3
HOXC6-203ENST00000504315 ITPRIPQ8IWB1 547 aa16.94■□□□□ 0.3
HOXC6-203ENST00000504315 TEPSINQ96N21 525 aa16.94■□□□□ 0.3
HOXC6-203ENST00000504315 CSRNP1Q96S65 589 aa16.94■□□□□ 0.3
HOXC6-203ENST00000504315 ANGEL1Q9UNK9 670 aaKnown RBP16.94■□□□□ 0.3
HOXC6-203ENST00000504315 CDK5RAP2Q96SN8 1893 aa16.93■□□□□ 0.3
HOXC6-203ENST00000504315 RPAP1Q9BWH6 1393 aaPredicted RBP16.93■□□□□ 0.3
HOXC6-203ENST00000504315 PPP1R12BO60237 982 aaPredicted RBP16.93■□□□□ 0.3
HOXC6-203ENST00000504315 TIMM10P62072 90 aa16.93■□□□□ 0.3
HOXC6-203ENST00000504315 FKBP1CQ5VVH2 108 aa16.93■□□□□ 0.3
HOXC6-203ENST00000504315 XAGE2Q96GT9 111 aa16.93■□□□□ 0.3
HOXC6-203ENST00000504315 TSKSQ9UJT2 592 aa16.93■□□□□ 0.3
HOXC6-203ENST00000504315 MAST2Q6P0Q8 1798 aa16.92■□□□□ 0.3
HOXC6-203ENST00000504315 PRDX5P30044 214 aa16.92■□□□□ 0.3
HOXC6-203ENST00000504315 TNNI2P48788 182 aa16.92■□□□□ 0.3
HOXC6-203ENST00000504315 RASGRF1Q13972 1273 aa16.92■□□□□ 0.3
HOXC6-203ENST00000504315 FAM83AQ86UY5 434 aa16.92■□□□□ 0.3
HOXC6-203ENST00000504315 FZD1Q9UP38 647 aa16.92■□□□□ 0.3
HOXC6-203ENST00000504315 G3BP1Q13283 466 aaKnown RBP eCLIP16.91■□□□□ 0.3
HOXC6-203ENST00000504315 PRKG1Q13976 671 aa16.91■□□□□ 0.3
HOXC6-203ENST00000504315 MVPQ14764 893 aaKnown RBP16.91■□□□□ 0.3
HOXC6-203ENST00000504315 CDAN1Q8IWY9 1227 aa16.91■□□□□ 0.3
HOXC6-203ENST00000504315 ZGPATQ8N5A5 531 aaKnown RBP16.91■□□□□ 0.3
HOXC6-203ENST00000504315 RNF186Q9NXI6 227 aa16.91■□□□□ 0.3
HOXC6-203ENST00000504315 FOCADQ5VW36 1801 aa16.91■□□□□ 0.3
HOXC6-203ENST00000504315 TCP10L2B9ZVM9 353 aa16.9■□□□□ 0.3
HOXC6-203ENST00000504315 USP2O75604 605 aaPredicted RBP16.9■□□□□ 0.3
HOXC6-203ENST00000504315 LDHBP07195 334 aaKnown RBP16.9■□□□□ 0.3
HOXC6-203ENST00000504315 IREB2P48200 963 aaKnown RBP16.9■□□□□ 0.3
HOXC6-203ENST00000504315 TM4SF4P48230 202 aa16.9■□□□□ 0.3
HOXC6-203ENST00000504315 SPRYD7Q5W111 196 aa16.9■□□□□ 0.3
HOXC6-203ENST00000504315 PANK1Q8TE04 598 aa16.9■□□□□ 0.3
HOXC6-203ENST00000504315 TMEM39BQ9GZU3 492 aa16.9■□□□□ 0.3
HOXC6-203ENST00000504315 C1orf115Q9H7X2 142 aa16.9■□□□□ 0.3
HOXC6-203ENST00000504315 GPR108Q9NPR9 543 aa16.9■□□□□ 0.3
HOXC6-203ENST00000504315 NOP58Q9Y2X3 529 aaKnown RBP16.9■□□□□ 0.3
HOXC6-203ENST00000504315 DAGLAQ9Y4D2 1042 aa16.9■□□□□ 0.3
HOXC6-203ENST00000504315 MS4A1P11836 297 aa16.89■□□□□ 0.29
HOXC6-203ENST00000504315 ARID4AP29374 1257 aaPredicted RBP16.89■□□□□ 0.29
HOXC6-203ENST00000504315 DIXDC1Q155Q3 683 aa16.89■□□□□ 0.29
HOXC6-203ENST00000504315 TMOD2Q9NZR1 351 aa16.89■□□□□ 0.29
HOXC6-203ENST00000504315 GAKO14976 1311 aa16.89■□□□□ 0.29
HOXC6-203ENST00000504315 ZBTB48P10074 688 aaPredicted RBP16.88■□□□□ 0.29
HOXC6-203ENST00000504315 CACNB3P54284 484 aa16.88■□□□□ 0.29
HOXC6-203ENST00000504315 CEP85Q6P2H3 762 aa16.88■□□□□ 0.29
HOXC6-203ENST00000504315 ANKRD13AQ8IZ07 590 aa16.88■□□□□ 0.29
HOXC6-203ENST00000504315 WNK4Q96J92 1243 aa16.88■□□□□ 0.29
HOXC6-203ENST00000504315 CLMNQ96JQ2 1002 aa16.88■□□□□ 0.29
HOXC6-203ENST00000504315 RFX7Q2KHR2 1363 aa16.88■□□□□ 0.29
HOXC6-203ENST00000504315 TRPA1O75762 1119 aa16.87■□□□□ 0.29
HOXC6-203ENST00000504315 SREBF2Q12772 1141 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms