RNA–Protein interactions for RNA: ENST00000502878.6

HMCES-204, Transcript of 5-hydroxymethylcytosine binding, ES cell specific, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMCES, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCES-204ENST00000502878 KIAA2012Q0VF49 1180 aa28.35■■■□□ 2.13
HMCES-204ENST00000502878 MIGA1Q8NAN2 632 aa28.35■■■□□ 2.13
HMCES-204ENST00000502878 PSMD1Q99460 953 aa28.35■■■□□ 2.13
HMCES-204ENST00000502878 BRCA1P38398 1863 aaKnown RBP28.35■■■□□ 2.13
HMCES-204ENST00000502878 CHD4Q14839 1912 aa28.34■■■□□ 2.13
HMCES-204ENST00000502878 MBD4O95243 580 aa28.34■■■□□ 2.13
HMCES-204ENST00000502878 SOGA3Q5TF21 947 aa28.34■■■□□ 2.13
HMCES-204ENST00000502878 CREB3L3Q68CJ9 461 aa28.34■■■□□ 2.13
HMCES-204ENST00000502878 DDRGK1Q96HY6 314 aa28.34■■■□□ 2.13
HMCES-204ENST00000502878 IPO9Q96P70 1041 aaKnown RBP28.34■■■□□ 2.13
HMCES-204ENST00000502878 STRBPQ96SI9 672 aaKnown RBP28.34■■■□□ 2.13
HMCES-204ENST00000502878 SNX14Q9Y5W7 946 aa28.34■■■□□ 2.13
HMCES-204ENST00000502878 MFSD14BQ5SR56 506 aa28.33■■■□□ 2.13
HMCES-204ENST00000502878 U3KPZ7 1027 aaPredicted RBP28.33■■■□□ 2.13
HMCES-204ENST00000502878 PODNQ7Z5L7 613 aa28.33■■■□□ 2.13
HMCES-204ENST00000502878 DZIP1Q86YF9 867 aaKnown RBP28.33■■■□□ 2.13
HMCES-204ENST00000502878 FBXW7Q969H0 707 aa28.33■■■□□ 2.13
HMCES-204ENST00000502878 ARMT1Q9H993 441 aa28.33■■■□□ 2.13
HMCES-204ENST00000502878 SLC27A2O14975 620 aa28.32■■■□□ 2.12
HMCES-204ENST00000502878 PPIP5K2O43314 1243 aa28.32■■■□□ 2.12
HMCES-204ENST00000502878 ECE2O60344 883 aa28.32■■■□□ 2.12
HMCES-204ENST00000502878 KCNB2Q92953 911 aa28.32■■■□□ 2.12
HMCES-204ENST00000502878 IL17RAQ96F46 866 aa28.32■■■□□ 2.12
HMCES-204ENST00000502878 KCNQ5Q9NR82 932 aa28.32■■■□□ 2.12
HMCES-204ENST00000502878 BCS1LQ9Y276 419 aa28.32■■■□□ 2.12
HMCES-204ENST00000502878 TTLL5Q6EMB2 1281 aa28.31■■■□□ 2.12
HMCES-204ENST00000502878 LCORLQ8N3X6 602 aa28.31■■■□□ 2.12
HMCES-204ENST00000502878 TBC1D22AQ8WUA7 517 aa28.31■■■□□ 2.12
HMCES-204ENST00000502878 RABEP1Q15276 862 aa28.31■■■□□ 2.12
HMCES-204ENST00000502878 ZNF277Q9NRM2 450 aaPredicted RBP28.31■■■□□ 2.12
HMCES-204ENST00000502878 MAGEB6P1A0A0J9YX57 407 aa28.3■■■□□ 2.12
HMCES-204ENST00000502878 TAF6LQ9Y6J9 622 aa28.3■■■□□ 2.12
HMCES-204ENST00000502878 RIOK1Q9BRS2 568 aaKnown RBP28.29■■■□□ 2.12
HMCES-204ENST00000502878 MXD3Q9BW11 206 aa28.29■■■□□ 2.12
HMCES-204ENST00000502878 DYNLL1P63167 89 aaKnown RBP28.28■■■□□ 2.12
HMCES-204ENST00000502878 RNF20Q5VTR2 975 aa28.28■■■□□ 2.12
HMCES-204ENST00000502878 CERS5Q8N5B7 392 aa28.28■■■□□ 2.12
HMCES-204ENST00000502878 MAST2Q6P0Q8 1798 aa28.28■■■□□ 2.12
HMCES-204ENST00000502878 IGSF3O75054 1194 aa28.28■■■□□ 2.12
HMCES-204ENST00000502878 DIXDC1Q155Q3 683 aa28.28■■■□□ 2.12
HMCES-204ENST00000502878 FHDC1Q9C0D6 1143 aaPredicted RBP28.28■■■□□ 2.12
HMCES-204ENST00000502878 FGAP02671 866 aa28.27■■■□□ 2.12
HMCES-204ENST00000502878 CYP21A2P08686 494 aa28.27■■■□□ 2.12
HMCES-204ENST00000502878 ZKSCAN1P17029 563 aaPredicted RBP28.27■■■□□ 2.12
HMCES-204ENST00000502878 TMED8Q6PL24 325 aaPredicted RBP28.27■■■□□ 2.12
HMCES-204ENST00000502878 PRKAB2O43741 272 aa28.26■■■□□ 2.11
HMCES-204ENST00000502878 APPP05067 770 aa28.26■■■□□ 2.11
HMCES-204ENST00000502878 ADCK5Q3MIX3 580 aa28.26■■■□□ 2.11
HMCES-204ENST00000502878 CCDC88AQ3V6T2 1871 aa28.26■■■□□ 2.11
HMCES-204ENST00000502878 SLC4A4Q9Y6R1 1079 aa28.26■■■□□ 2.11
HMCES-204ENST00000502878 CD2BP2O95400 341 aaKnown RBP28.25■■■□□ 2.11
HMCES-204ENST00000502878 SLC4A3P48751 1232 aa28.25■■■□□ 2.11
HMCES-204ENST00000502878 LARGE2Q8N3Y3 721 aa28.25■■■□□ 2.11
HMCES-204ENST00000502878 TBC1D2Q9BYX2 928 aa28.25■■■□□ 2.11
HMCES-204ENST00000502878 AATFQ9NY61 560 aaKnown RBP eCLIP28.25■■■□□ 2.11
HMCES-204ENST00000502878 YDJCA8MPS7 323 aa28.24■■■□□ 2.11
HMCES-204ENST00000502878 PATL2C9JE40 543 aaKnown RBP28.24■■■□□ 2.11
HMCES-204ENST00000502878 GSTO1P78417 241 aa28.24■■■□□ 2.11
HMCES-204ENST00000502878 UPF3BQ9BZI7 483 aaKnown RBP28.24■■■□□ 2.11
HMCES-204ENST00000502878 GSG1L2A8MUP6 293 aa28.24■■■□□ 2.11
HMCES-204ENST00000502878 STRIP1Q5VSL9 837 aa28.24■■■□□ 2.11
HMCES-204ENST00000502878 EPB41L4AQ9HCS5 686 aaPredicted RBP28.24■■■□□ 2.11
HMCES-204ENST00000502878 CTNNA3Q9UI47 895 aa28.24■■■□□ 2.11
HMCES-204ENST00000502878 SCN9AQ15858 1988 aa28.23■■■□□ 2.11
HMCES-204ENST00000502878 COL4A5P29400 1685 aa28.23■■■□□ 2.11
HMCES-204ENST00000502878 NFKBIEO00221 500 aa28.23■■■□□ 2.11
HMCES-204ENST00000502878 GNAT2P19087 354 aa28.23■■■□□ 2.11
HMCES-204ENST00000502878 NEK4P51957 841 aa28.23■■■□□ 2.11
HMCES-204ENST00000502878 TSGA10IPQ3SY00 556 aa28.23■■■□□ 2.11
HMCES-204ENST00000502878 JAKMIP1Q96N16 626 aaKnown RBP28.23■■■□□ 2.11
HMCES-204ENST00000502878 VPS33BQ9H267 617 aa28.23■■■□□ 2.11
HMCES-204ENST00000502878 TAOK3Q9H2K8 898 aa28.23■■■□□ 2.11
HMCES-204ENST00000502878 F8W031 263 aaPredicted RBP28.22■■■□□ 2.11
HMCES-204ENST00000502878 DACT2Q5SW24 774 aa28.22■■■□□ 2.11
HMCES-204ENST00000502878 SNX21Q969T3 373 aa28.22■■■□□ 2.11
HMCES-204ENST00000502878 SUGT1Q9Y2Z0 365 aa28.22■■■□□ 2.11
HMCES-204ENST00000502878 USP17L3A6NCW0 530 aa28.22■■■□□ 2.11
HMCES-204ENST00000502878 USP17L4A6NCW7 530 aa28.22■■■□□ 2.11
HMCES-204ENST00000502878 LDHCP07864 332 aa28.22■■■□□ 2.11
HMCES-204ENST00000502878 IARSP41252 1262 aaKnown RBP28.22■■■□□ 2.11
HMCES-204ENST00000502878 USP17L1Q7RTZ2 530 aa28.22■■■□□ 2.11
HMCES-204ENST00000502878 IFNL3Q8IZI9 196 aa28.22■■■□□ 2.11
HMCES-204ENST00000502878 MROH7-TTC4A0A0A0MT08 1334 aa28.22■■■□□ 2.11
HMCES-204ENST00000502878 BECN1Q14457 450 aa28.21■■■□□ 2.11
HMCES-204ENST00000502878 SDR42E1Q8WUS8 393 aa28.21■■■□□ 2.11
HMCES-204ENST00000502878 FER1L6Q2WGJ9 1857 aa28.21■■■□□ 2.11
HMCES-204ENST00000502878 HAND2P61296 217 aa28.2■■■□□ 2.11
HMCES-204ENST00000502878 ALX1Q15699 326 aa28.2■■■□□ 2.11
HMCES-204ENST00000502878 CPA1P15085 419 aa28.2■■■□□ 2.1
HMCES-204ENST00000502878 CASTP20810 708 aaKnown RBP28.2■■■□□ 2.1
HMCES-204ENST00000502878 TTF2Q9UNY4 1162 aaKnown RBP28.2■■■□□ 2.1
HMCES-204ENST00000502878 COL9A3Q14050 684 aaPredicted RBP28.19■■■□□ 2.1
HMCES-204ENST00000502878 IMMTQ16891 758 aaKnown RBP28.19■■■□□ 2.1
HMCES-204ENST00000502878 TM6SF1Q9BZW5 370 aa28.19■■■□□ 2.1
HMCES-204ENST00000502878 RPAP1Q9BWH6 1393 aaPredicted RBP28.19■■■□□ 2.1
HMCES-204ENST00000502878 FKBP1AP62942 108 aaKnown RBP28.19■■■□□ 2.1
HMCES-204ENST00000502878 STOX1Q6ZVD7 989 aa28.19■■■□□ 2.1
HMCES-204ENST00000502878 HSCBQ8IWL3 235 aa28.19■■■□□ 2.1
HMCES-204ENST00000502878 NAPBQ9H115 298 aa28.19■■■□□ 2.1
HMCES-204ENST00000502878 ST18O60284 1047 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms