RNA–Protein interactions for RNA: ENST00000498872.2

AP004609.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP004609.1, Length 1,646 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004609.1-201ENST00000498872 PDE8BO95263 885 aa21.11■□□□□ 0.97
AP004609.1-201ENST00000498872 VGLL2Q8N8G2 317 aa21.11■□□□□ 0.97
AP004609.1-201ENST00000498872 TTF2Q9UNY4 1162 aaKnown RBP21.11■□□□□ 0.97
AP004609.1-201ENST00000498872 MYO1BO43795 1136 aa21.11■□□□□ 0.97
AP004609.1-201ENST00000498872 PTPN12Q05209 780 aaKnown RBP21.11■□□□□ 0.97
AP004609.1-201ENST00000498872 CHAF1AQ13111 956 aaPredicted RBP21.11■□□□□ 0.97
AP004609.1-201ENST00000498872 ANGEL1Q9UNK9 670 aaKnown RBP21.11■□□□□ 0.97
AP004609.1-201ENST00000498872 FRAT2O75474 233 aaPredicted RBP21.1■□□□□ 0.97
AP004609.1-201ENST00000498872 PDE4AP27815 886 aa21.1■□□□□ 0.97
AP004609.1-201ENST00000498872 GRIK5Q16478 980 aa21.1■□□□□ 0.97
AP004609.1-201ENST00000498872 RWDD1Q9H446 243 aaPredicted RBP21.1■□□□□ 0.97
AP004609.1-201ENST00000498872 SSC5DA1L4H1 1573 aa21.09■□□□□ 0.97
AP004609.1-201ENST00000498872 UBTFL1P0CB47 393 aaPredicted RBP21.09■□□□□ 0.97
AP004609.1-201ENST00000498872 RFX5P48382 616 aaPredicted RBP21.09■□□□□ 0.97
AP004609.1-201ENST00000498872 BCAMP50895 628 aa21.09■□□□□ 0.97
AP004609.1-201ENST00000498872 CAVIN4Q5BKX8 364 aa21.09■□□□□ 0.97
AP004609.1-201ENST00000498872 ARMC9Q7Z3E5 817 aa21.09■□□□□ 0.97
AP004609.1-201ENST00000498872 FBXO33Q7Z6M2 555 aa21.09■□□□□ 0.97
AP004609.1-201ENST00000498872 SAGE1Q9NXZ1 904 aa21.09■□□□□ 0.97
AP004609.1-201ENST00000498872 MYH13Q9UKX3 1938 aa21.09■□□□□ 0.97
AP004609.1-201ENST00000498872 COL1A1P02452 1464 aaPredicted RBP21.09■□□□□ 0.97
AP004609.1-201ENST00000498872 DGKZQ13574 1117 aa21.08■□□□□ 0.97
AP004609.1-201ENST00000498872 BACH2Q9BYV9 841 aa21.08■□□□□ 0.97
AP004609.1-201ENST00000498872 API5Q9BZZ5 524 aaKnown RBP21.08■□□□□ 0.97
AP004609.1-201ENST00000498872 MCOLN1Q9GZU1 580 aa21.08■□□□□ 0.97
AP004609.1-201ENST00000498872 SIL1Q9H173 461 aa21.08■□□□□ 0.97
AP004609.1-201ENST00000498872 CCDC85CA6NKD9 419 aa21.07■□□□□ 0.96
AP004609.1-201ENST00000498872 TDRD3Q9H7E2 651 aaKnown RBP21.07■□□□□ 0.96
AP004609.1-201ENST00000498872 NBPF12Q5TAG4 269 aaPredicted RBP21.07■□□□□ 0.96
AP004609.1-201ENST00000498872 CHMP4BQ9H444 224 aaKnown RBP21.07■□□□□ 0.96
AP004609.1-201ENST00000498872 ZBTB40Q9NUA8 1239 aa21.07■□□□□ 0.96
AP004609.1-201ENST00000498872 EYA2O00167 538 aa21.06■□□□□ 0.96
AP004609.1-201ENST00000498872 RASA3Q14644 834 aa21.06■□□□□ 0.96
AP004609.1-201ENST00000498872 PUM3Q15397 648 aaKnown RBP21.06■□□□□ 0.96
AP004609.1-201ENST00000498872 LRRFIP2Q9Y608 721 aaKnown RBP21.06■□□□□ 0.96
AP004609.1-201ENST00000498872 CRKP46108 304 aa21.05■□□□□ 0.96
AP004609.1-201ENST00000498872 ATG9AQ7Z3C6 839 aa21.05■□□□□ 0.96
AP004609.1-201ENST00000498872 ZNF70Q9UC06 446 aaPredicted RBP21.05■□□□□ 0.96
AP004609.1-201ENST00000498872 SERPINA10Q9UK55 444 aa21.05■□□□□ 0.96
AP004609.1-201ENST00000498872 IFIT1P09914 478 aaKnown RBP21.04■□□□□ 0.96
AP004609.1-201ENST00000498872 FGFR2P21802 821 aa21.04■□□□□ 0.96
AP004609.1-201ENST00000498872 HDAC1Q13547 482 aaPredicted RBP21.04■□□□□ 0.96
AP004609.1-201ENST00000498872 LDLRAD1Q5T700 205 aa21.04■□□□□ 0.96
AP004609.1-201ENST00000498872 CLMNQ96JQ2 1002 aa21.04■□□□□ 0.96
AP004609.1-201ENST00000498872 MEIS3Q99687 375 aa21.04■□□□□ 0.96
AP004609.1-201ENST00000498872 PPP2R3BQ9Y5P8 575 aa21.04■□□□□ 0.96
AP004609.1-201ENST00000498872 TBC1D8O95759 1140 aa21.04■□□□□ 0.96
AP004609.1-201ENST00000498872 SPDYE2Q495Y8 402 aa21.04■□□□□ 0.96
AP004609.1-201ENST00000498872 REM2Q8IYK8 340 aaPredicted RBP21.04■□□□□ 0.96
AP004609.1-201ENST00000498872 OTOFQ9HC10 1997 aa21.03■□□□□ 0.96
AP004609.1-201ENST00000498872 TCP10L2B9ZVM9 353 aa21.03■□□□□ 0.96
AP004609.1-201ENST00000498872 PPP1R12BO60237 982 aaPredicted RBP21.03■□□□□ 0.96
AP004609.1-201ENST00000498872 RGS3P49796 1198 aa21.03■□□□□ 0.96
AP004609.1-201ENST00000498872 CDAN1Q8IWY9 1227 aa21.03■□□□□ 0.96
AP004609.1-201ENST00000498872 PA2G4Q9UQ80 394 aaKnown RBP21.03■□□□□ 0.96
AP004609.1-201ENST00000498872 SUPT20HL1Q3ZLR7 823 aa21.02■□□□□ 0.96
AP004609.1-201ENST00000498872 SLC5A1P13866 664 aa21.01■□□□□ 0.95
AP004609.1-201ENST00000498872 CACNB3P54284 484 aa21.01■□□□□ 0.95
AP004609.1-201ENST00000498872 SPRYD7Q5W111 196 aa21.01■□□□□ 0.95
AP004609.1-201ENST00000498872 TBC1D22AQ8WUA7 517 aa21.01■□□□□ 0.95
AP004609.1-201ENST00000498872 LPIN2Q92539 896 aa21.01■□□□□ 0.95
AP004609.1-201ENST00000498872 SLC10A4Q96EP9 437 aa21.01■□□□□ 0.95
AP004609.1-201ENST00000498872 ZBTB7BO15156 539 aaPredicted RBP21■□□□□ 0.95
AP004609.1-201ENST00000498872 TM4SF4P48230 202 aa21■□□□□ 0.95
AP004609.1-201ENST00000498872 USP2O75604 605 aaPredicted RBP21■□□□□ 0.95
AP004609.1-201ENST00000498872 TNFAIP1Q13829 316 aa21■□□□□ 0.95
AP004609.1-201ENST00000498872 MAP3K11Q16584 847 aa21■□□□□ 0.95
AP004609.1-201ENST00000498872 TMEM39BQ9GZU3 492 aa21■□□□□ 0.95
AP004609.1-201ENST00000498872 SREBF2Q12772 1141 aa20.99■□□□□ 0.95
AP004609.1-201ENST00000498872 TEKT1Q969V4 418 aa20.99■□□□□ 0.95
AP004609.1-201ENST00000498872 ATP2B3Q16720 1220 aa20.98■□□□□ 0.95
AP004609.1-201ENST00000498872 INTS3Q68E01 1043 aaKnown RBP20.98■□□□□ 0.95
AP004609.1-201ENST00000498872 CEP126Q9P2H0 1117 aa20.98■□□□□ 0.95
AP004609.1-201ENST00000498872 CIAO1O76071 339 aa20.97■□□□□ 0.95
AP004609.1-201ENST00000498872 IREB2P48200 963 aaKnown RBP20.97■□□□□ 0.95
AP004609.1-201ENST00000498872 WNK4Q96J92 1243 aa20.97■□□□□ 0.95
AP004609.1-201ENST00000498872 TEPSINQ96N21 525 aa20.97■□□□□ 0.95
AP004609.1-201ENST00000498872 LAMB1P07942 1786 aa20.97■□□□□ 0.95
AP004609.1-201ENST00000498872 ANP32AP39687 249 aaKnown RBP20.96■□□□□ 0.95
AP004609.1-201ENST00000498872 ZNF296Q8WUU4 475 aaPredicted RBP20.96■□□□□ 0.95
AP004609.1-201ENST00000498872 R3HDMLQ9H3Y0 253 aa20.96■□□□□ 0.95
AP004609.1-201ENST00000498872 TNNI2P48788 182 aa20.96■□□□□ 0.95
AP004609.1-201ENST00000498872 HDLBPQ00341 1268 aaKnown RBP20.96■□□□□ 0.95
AP004609.1-201ENST00000498872 GJA5P36382 358 aa20.95■□□□□ 0.94
AP004609.1-201ENST00000498872 IL15P40933 162 aaPredicted RBP20.95■□□□□ 0.94
AP004609.1-201ENST00000498872 C8orf34Q49A92 452 aa20.95■□□□□ 0.94
AP004609.1-201ENST00000498872 SMC5Q8IY18 1101 aa20.95■□□□□ 0.94
AP004609.1-201ENST00000498872 ANKRD13AQ8IZ07 590 aa20.95■□□□□ 0.94
AP004609.1-201ENST00000498872 ZDHHC15Q96MV8 337 aa20.95■□□□□ 0.94
AP004609.1-201ENST00000498872 ELP3Q9H9T3 547 aa20.95■□□□□ 0.94
AP004609.1-201ENST00000498872 FBXO3Q9UK99 471 aa20.95■□□□□ 0.94
AP004609.1-201ENST00000498872 HDAC5Q9UQL6 1122 aa20.95■□□□□ 0.94
AP004609.1-201ENST00000498872 SRGAP3O43295 1099 aa20.94■□□□□ 0.94
AP004609.1-201ENST00000498872 ZBTB48P10074 688 aaPredicted RBP20.94■□□□□ 0.94
AP004609.1-201ENST00000498872 ADORA1P30542 326 aa20.94■□□□□ 0.94
AP004609.1-201ENST00000498872 PHKA1P46020 1223 aa20.94■□□□□ 0.94
AP004609.1-201ENST00000498872 APOBEC3HQ6NTF7 200 aaKnown RBP20.94■□□□□ 0.94
AP004609.1-201ENST00000498872 CTU1Q7Z7A3 348 aaKnown RBP20.94■□□□□ 0.94
AP004609.1-201ENST00000498872 WDR66Q8TBY9 1149 aa20.94■□□□□ 0.94
AP004609.1-201ENST00000498872 COPRSQ9NQ92 184 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms