RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 SPDYE5A6NIY4 337 aa19.94■□□□□ 0.78
HDAC6-236ENST00000498808 TCP10L2B9ZVM9 353 aa19.94■□□□□ 0.78
HDAC6-236ENST00000498808 SLC4A2P04920 1241 aa19.94■□□□□ 0.78
HDAC6-236ENST00000498808 FOXO4P98177 505 aa19.94■□□□□ 0.78
HDAC6-236ENST00000498808 IFIT5Q13325 482 aaKnown RBP19.94■□□□□ 0.78
HDAC6-236ENST00000498808 MTFR1Q15390 333 aa19.94■□□□□ 0.78
HDAC6-236ENST00000498808 MFSD14BQ5SR56 506 aa19.94■□□□□ 0.78
HDAC6-236ENST00000498808 DZIP1LQ8IYY4 767 aaKnown RBP19.94■□□□□ 0.78
HDAC6-236ENST00000498808 LINS1Q8NG48 757 aa19.94■□□□□ 0.78
HDAC6-236ENST00000498808 TTF2Q9UNY4 1162 aaKnown RBP19.94■□□□□ 0.78
HDAC6-236ENST00000498808 CSADQ9Y600 493 aa19.94■□□□□ 0.78
HDAC6-236ENST00000498808 FLIIQ13045 1269 aa19.93■□□□□ 0.78
HDAC6-236ENST00000498808 DNAAF4Q8WXU2 420 aa19.93■□□□□ 0.78
HDAC6-236ENST00000498808 BTBD19C9JJ37 291 aa19.92■□□□□ 0.78
HDAC6-236ENST00000498808 DDX10Q13206 875 aaKnown RBP19.92■□□□□ 0.78
HDAC6-236ENST00000498808 KIF22Q14807 665 aa19.92■□□□□ 0.78
HDAC6-236ENST00000498808 TWISTNBQ3B726 338 aaPredicted RBP19.92■□□□□ 0.78
HDAC6-236ENST00000498808 TDRD7Q8NHU6 1098 aaKnown RBP19.92■□□□□ 0.78
HDAC6-236ENST00000498808 SNCAIPQ9Y6H5 919 aa19.92■□□□□ 0.78
HDAC6-236ENST00000498808 PLIN1O60240 522 aa19.91■□□□□ 0.78
HDAC6-236ENST00000498808 CTGFP29279 349 aa19.91■□□□□ 0.78
HDAC6-236ENST00000498808 DPF3Q92784 378 aa19.91■□□□□ 0.78
HDAC6-236ENST00000498808 ZNF594Q96JF6 807 aaPredicted RBP19.91■□□□□ 0.78
HDAC6-236ENST00000498808 PRO3102Q9H379 93 aa19.91■□□□□ 0.78
HDAC6-236ENST00000498808 ZCCHC17Q9NP64 241 aaKnown RBP19.91■□□□□ 0.78
HDAC6-236ENST00000498808 CHMP3Q9Y3E7 222 aa19.91■□□□□ 0.78
HDAC6-236ENST00000498808 WDHD1O75717 1129 aaPredicted RBP19.9■□□□□ 0.78
HDAC6-236ENST00000498808 ECM2O94769 699 aaPredicted RBP19.9■□□□□ 0.78
HDAC6-236ENST00000498808 GNRH1P01148 92 aa19.9■□□□□ 0.78
HDAC6-236ENST00000498808 CETPP11597 493 aa19.9■□□□□ 0.78
HDAC6-236ENST00000498808 CRKP46108 304 aa19.9■□□□□ 0.78
HDAC6-236ENST00000498808 PRMT2P55345 433 aa19.9■□□□□ 0.78
HDAC6-236ENST00000498808 FKBP5Q13451 457 aaPredicted RBP19.9■□□□□ 0.78
HDAC6-236ENST00000498808 IRF6O14896 467 aa19.89■□□□□ 0.77
HDAC6-236ENST00000498808 GYG1P46976 350 aa19.89■□□□□ 0.77
HDAC6-236ENST00000498808 TNNI2P48788 182 aa19.89■□□□□ 0.77
HDAC6-236ENST00000498808 GRIK5Q16478 980 aa19.89■□□□□ 0.77
HDAC6-236ENST00000498808 EPHA10Q5JZY3 1008 aa19.89■□□□□ 0.77
HDAC6-236ENST00000498808 UBE2Q1Q7Z7E8 422 aa19.89■□□□□ 0.77
HDAC6-236ENST00000498808 ERO1BQ86YB8 467 aa19.89■□□□□ 0.77
HDAC6-236ENST00000498808 SNAPC2Q13487 334 aa19.88■□□□□ 0.77
HDAC6-236ENST00000498808 LMBR1LQ6UX01 489 aa19.88■□□□□ 0.77
HDAC6-236ENST00000498808 C17orf99Q6UX52 265 aa19.88■□□□□ 0.77
HDAC6-236ENST00000498808 LDHAL6AQ6ZMR3 332 aa19.88■□□□□ 0.77
HDAC6-236ENST00000498808 SRRDQ9UH36 339 aa19.88■□□□□ 0.77
HDAC6-236ENST00000498808 DLL1O00548 723 aa19.87■□□□□ 0.77
HDAC6-236ENST00000498808 CACNB3P54284 484 aa19.87■□□□□ 0.77
HDAC6-236ENST00000498808 ZKSCAN4Q969J2 545 aaPredicted RBP19.87■□□□□ 0.77
HDAC6-236ENST00000498808 FAM84BQ96KN1 310 aaPredicted RBP19.87■□□□□ 0.77
HDAC6-236ENST00000498808 TRIM47Q96LD4 638 aa19.87■□□□□ 0.77
HDAC6-236ENST00000498808 WRNIP1Q96S55 665 aa19.87■□□□□ 0.77
HDAC6-236ENST00000498808 CNNM1Q9NRU3 951 aa19.87■□□□□ 0.77
HDAC6-236ENST00000498808 HIBADHP31937 336 aaKnown RBP19.86■□□□□ 0.77
HDAC6-236ENST00000498808 GJA8P48165 433 aa19.86■□□□□ 0.77
HDAC6-236ENST00000498808 PPIL2Q13356 520 aa19.86■□□□□ 0.77
HDAC6-236ENST00000498808 CPA4Q9UI42 421 aa19.86■□□□□ 0.77
HDAC6-236ENST00000498808 CACNA1FO60840 1977 aa19.86■□□□□ 0.77
HDAC6-236ENST00000498808 GJB1P08034 283 aa19.85■□□□□ 0.77
HDAC6-236ENST00000498808 OSBPP22059 807 aa19.85■□□□□ 0.77
HDAC6-236ENST00000498808 GRK4P32298 578 aa19.85■□□□□ 0.77
HDAC6-236ENST00000498808 PSMC4P43686 418 aa19.85■□□□□ 0.77
HDAC6-236ENST00000498808 UBE4AQ14139 1066 aa19.85■□□□□ 0.77
HDAC6-236ENST00000498808 CCDC57Q2TAC2 916 aa19.85■□□□□ 0.77
HDAC6-236ENST00000498808 TAF7LQ5H9L4 462 aa19.85■□□□□ 0.77
HDAC6-236ENST00000498808 SLC17A8Q8NDX2 589 aa19.85■□□□□ 0.77
HDAC6-236ENST00000498808 NKX2-3Q8TAU0 364 aa19.85■□□□□ 0.77
HDAC6-236ENST00000498808 ADGRA2Q96PE1 1338 aa19.84■□□□□ 0.77
HDAC6-236ENST00000498808 CCL5P13501 91 aa19.84■□□□□ 0.77
HDAC6-236ENST00000498808 BEND3Q5T5X7 828 aa19.84■□□□□ 0.77
HDAC6-236ENST00000498808 HTATIP2Q9BUP3 242 aa19.84■□□□□ 0.77
HDAC6-236ENST00000498808 PRKRIP1Q9H875 184 aaPredicted RBP19.84■□□□□ 0.77
HDAC6-236ENST00000498808 RIPOR2Q9Y4F9 1068 aa19.84■□□□□ 0.77
HDAC6-236ENST00000498808 F6X3S4 739 aa19.83■□□□□ 0.77
HDAC6-236ENST00000498808 HDLBPQ00341 1268 aaKnown RBP19.83■□□□□ 0.77
HDAC6-236ENST00000498808 RAET1EQ8TD07 263 aa19.83■□□□□ 0.77
HDAC6-236ENST00000498808 MYPNQ86TC9 1320 aa19.82■□□□□ 0.76
HDAC6-236ENST00000498808 ANKRD23Q86SG2 305 aa19.82■□□□□ 0.76
HDAC6-236ENST00000498808 FAM83AQ86UY5 434 aa19.82■□□□□ 0.76
HDAC6-236ENST00000498808 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.82■□□□□ 0.76
HDAC6-236ENST00000498808 PUS3Q9BZE2 481 aaKnown RBP19.82■□□□□ 0.76
HDAC6-236ENST00000498808 IQSEC3Q9UPP2 1182 aaPredicted RBP19.82■□□□□ 0.76
HDAC6-236ENST00000498808 COL6A3P12111 3177 aa19.81■□□□□ 0.76
HDAC6-236ENST00000498808 LAMA3Q16787 3333 aa19.81■□□□□ 0.76
HDAC6-236ENST00000498808 ZBTB7BO15156 539 aaPredicted RBP19.81■□□□□ 0.76
HDAC6-236ENST00000498808 FMNL1O95466 1100 aaPredicted RBP19.81■□□□□ 0.76
HDAC6-236ENST00000498808 HOXD10P28358 340 aa19.81■□□□□ 0.76
HDAC6-236ENST00000498808 PPATQ06203 517 aa19.81■□□□□ 0.76
HDAC6-236ENST00000498808 WWC1Q8IX03 1113 aa19.81■□□□□ 0.76
HDAC6-236ENST00000498808 TEKT1Q969V4 418 aa19.81■□□□□ 0.76
HDAC6-236ENST00000498808 RNF208Q9H0X6 261 aa19.81■□□□□ 0.76
HDAC6-236ENST00000498808 NR2E3Q9Y5X4 410 aa19.81■□□□□ 0.76
HDAC6-236ENST00000498808 RPAP1Q9BWH6 1393 aaPredicted RBP19.81■□□□□ 0.76
HDAC6-236ENST00000498808 GRM8O00222 908 aa19.8■□□□□ 0.76
HDAC6-236ENST00000498808 PDHXO00330 501 aa19.8■□□□□ 0.76
HDAC6-236ENST00000498808 SOX1O00570 391 aaPredicted RBP19.8■□□□□ 0.76
HDAC6-236ENST00000498808 INPP5BP32019 993 aa19.8■□□□□ 0.76
HDAC6-236ENST00000498808 CHAF1AQ13111 956 aaPredicted RBP19.8■□□□□ 0.76
HDAC6-236ENST00000498808 MOGSQ13724 837 aa19.8■□□□□ 0.76
HDAC6-236ENST00000498808 CCDC27Q2M243 656 aa19.8■□□□□ 0.76
HDAC6-236ENST00000498808 FBXO33Q7Z6M2 555 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms