RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 MAGEB6Q8N7X4 407 aa9.62□□□□□ -0.87
PDZRN3-212ENST00000498048 AIDAQ96BJ3 306 aa9.62□□□□□ -0.87
PDZRN3-212ENST00000498048 PUS7LQ9H0K6 701 aaKnown RBP9.62□□□□□ -0.87
PDZRN3-212ENST00000498048 TSPYL2Q9H2G4 693 aaPredicted RBP9.62□□□□□ -0.87
PDZRN3-212ENST00000498048 ZSWIM6Q9HCJ5 1215 aa9.62□□□□□ -0.87
PDZRN3-212ENST00000498048 STK32BQ9NY57 414 aa9.62□□□□□ -0.87
PDZRN3-212ENST00000498048 ANKIB1Q9P2G1 1089 aa9.62□□□□□ -0.87
PDZRN3-212ENST00000498048 DENND2AQ9ULE3 1009 aa9.62□□□□□ -0.87
PDZRN3-212ENST00000498048 PARP3Q9Y6F1 533 aa9.62□□□□□ -0.87
PDZRN3-212ENST00000498048 TAF6LQ9Y6J9 622 aa9.62□□□□□ -0.87
PDZRN3-212ENST00000498048 C10orf71Q711Q0 1435 aa9.62□□□□□ -0.87
PDZRN3-212ENST00000498048 ZMYM6O95789 1325 aa9.61□□□□□ -0.87
PDZRN3-212ENST00000498048 TCRBV5S4A2TA0A5A2 114 aa9.61□□□□□ -0.87
PDZRN3-212ENST00000498048 PPEF1O14829 653 aaPredicted RBP9.61□□□□□ -0.87
PDZRN3-212ENST00000498048 FRAT2O75474 233 aaPredicted RBP9.61□□□□□ -0.87
PDZRN3-212ENST00000498048 UFL1O94874 794 aa9.61□□□□□ -0.87
PDZRN3-212ENST00000498048 MBD4O95243 580 aa9.61□□□□□ -0.87
PDZRN3-212ENST00000498048 MMP10P09238 476 aa9.61□□□□□ -0.87
PDZRN3-212ENST00000498048 RPS6KB1P23443 525 aa9.61□□□□□ -0.87
PDZRN3-212ENST00000498048 EN1Q05925 392 aaPredicted RBP9.61□□□□□ -0.87
PDZRN3-212ENST00000498048 CUL4AQ13619 759 aa9.61□□□□□ -0.87
PDZRN3-212ENST00000498048 EZH2Q15910 746 aaKnown RBP9.61□□□□□ -0.87
PDZRN3-212ENST00000498048 TSGA10IPQ3SY00 556 aa9.61□□□□□ -0.87
PDZRN3-212ENST00000498048 ZGPATQ8N5A5 531 aaKnown RBP9.61□□□□□ -0.87
PDZRN3-212ENST00000498048 LRP2BPQ9P2M1 347 aa9.61□□□□□ -0.87
PDZRN3-212ENST00000498048 IRS2Q9Y4H2 1338 aa9.6□□□□□ -0.87
PDZRN3-212ENST00000498048 FOXP2O15409 715 aa9.6□□□□□ -0.87
PDZRN3-212ENST00000498048 LARGE1O95461 756 aa9.6□□□□□ -0.87
PDZRN3-212ENST00000498048 CHAF1AQ13111 956 aaPredicted RBP9.6□□□□□ -0.87
PDZRN3-212ENST00000498048 RAB3GAP1Q15042 981 aa9.6□□□□□ -0.87
PDZRN3-212ENST00000498048 ANKRD1Q15327 319 aa9.6□□□□□ -0.87
PDZRN3-212ENST00000498048 IMMTQ16891 758 aaKnown RBP9.6□□□□□ -0.87
PDZRN3-212ENST00000498048 STOX1Q6ZVD7 989 aa9.6□□□□□ -0.87
PDZRN3-212ENST00000498048 TMC4Q7Z404 712 aa9.6□□□□□ -0.87
PDZRN3-212ENST00000498048 ZNF804AQ7Z570 1209 aa9.6□□□□□ -0.87
PDZRN3-212ENST00000498048 SLC51AQ86UW1 340 aa9.6□□□□□ -0.87
PDZRN3-212ENST00000498048 INTS4Q96HW7 963 aaKnown RBP9.6□□□□□ -0.87
PDZRN3-212ENST00000498048 TCEANC2Q96MN5 208 aa9.6□□□□□ -0.87
PDZRN3-212ENST00000498048 NEK1Q96PY6 1258 aa9.6□□□□□ -0.87
PDZRN3-212ENST00000498048 CWC22Q9HCG8 908 aaKnown RBP9.6□□□□□ -0.87
PDZRN3-212ENST00000498048 SH2B1Q9NRF2 756 aaPredicted RBP9.6□□□□□ -0.87
PDZRN3-212ENST00000498048 RAI14Q9P0K7 980 aa9.6□□□□□ -0.87
PDZRN3-212ENST00000498048 ABCF2Q9UG63 623 aa9.6□□□□□ -0.87
PDZRN3-212ENST00000498048 CTNNA3Q9UI47 895 aa9.6□□□□□ -0.87
PDZRN3-212ENST00000498048 LIMCH1Q9UPQ0 1083 aa9.6□□□□□ -0.87
PDZRN3-212ENST00000498048 LEMD3Q9Y2U8 911 aa9.6□□□□□ -0.87
PDZRN3-212ENST00000498048 SIPA1L1O43166 1804 aa9.59□□□□□ -0.87
PDZRN3-212ENST00000498048 HMGB1P09429 215 aaKnown RBP9.59□□□□□ -0.87
PDZRN3-212ENST00000498048 HOXA10P31260 410 aaPredicted RBP9.59□□□□□ -0.87
PDZRN3-212ENST00000498048 HIBADHP31937 336 aaKnown RBP9.59□□□□□ -0.87
PDZRN3-212ENST00000498048 HAND2P61296 217 aa9.59□□□□□ -0.87
PDZRN3-212ENST00000498048 NUCB2P80303 420 aa9.59□□□□□ -0.87
PDZRN3-212ENST00000498048 GPSM2P81274 684 aa9.59□□□□□ -0.87
PDZRN3-212ENST00000498048 SLC15A2Q16348 729 aa9.59□□□□□ -0.87
PDZRN3-212ENST00000498048 FBXO33Q7Z6M2 555 aa9.59□□□□□ -0.87
PDZRN3-212ENST00000498048 FAM84BQ96KN1 310 aaPredicted RBP9.59□□□□□ -0.87
PDZRN3-212ENST00000498048 ZSCAN31Q96LW9 406 aaPredicted RBP9.59□□□□□ -0.87
PDZRN3-212ENST00000498048 GBP4Q96PP9 640 aa9.59□□□□□ -0.87
PDZRN3-212ENST00000498048 CAMKK2Q96RR4 588 aa9.59□□□□□ -0.87
PDZRN3-212ENST00000498048 CRAMP1Q96RY5 1269 aa9.59□□□□□ -0.87
PDZRN3-212ENST00000498048 BRIP1Q9BX63 1249 aa9.59□□□□□ -0.87
PDZRN3-212ENST00000498048 GGA1Q9UJY5 639 aa9.59□□□□□ -0.87
PDZRN3-212ENST00000498048 A0A0G2JLW4 131 aa9.58□□□□□ -0.88
PDZRN3-212ENST00000498048 WTIPA6NIX2 430 aaPredicted RBP9.58□□□□□ -0.88
PDZRN3-212ENST00000498048 DDX11L8A8MPP1 907 aa9.58□□□□□ -0.88
PDZRN3-212ENST00000498048 E7EWF7 191 aa9.58□□□□□ -0.88
PDZRN3-212ENST00000498048 NPR1P16066 1061 aa9.58□□□□□ -0.88
PDZRN3-212ENST00000498048 CYP7A1P22680 504 aa9.58□□□□□ -0.88
PDZRN3-212ENST00000498048 ATP2B4P23634 1241 aa9.58□□□□□ -0.88
PDZRN3-212ENST00000498048 PDE6BP35913 854 aa9.58□□□□□ -0.88
PDZRN3-212ENST00000498048 FGD1P98174 961 aa9.58□□□□□ -0.88
PDZRN3-212ENST00000498048 TTLL5Q6EMB2 1281 aa9.58□□□□□ -0.88
PDZRN3-212ENST00000498048 RALYLQ86SE5 291 aaKnown RBP9.58□□□□□ -0.88
PDZRN3-212ENST00000498048 CCDC83Q8IWF9 413 aa9.58□□□□□ -0.88
PDZRN3-212ENST00000498048 LCORLQ8N3X6 602 aa9.58□□□□□ -0.88
PDZRN3-212ENST00000498048 GPR101Q96P66 508 aaPredicted RBP9.58□□□□□ -0.88
PDZRN3-212ENST00000498048 NAPBQ9H115 298 aa9.58□□□□□ -0.88
PDZRN3-212ENST00000498048 ARMT1Q9H993 441 aa9.58□□□□□ -0.88
PDZRN3-212ENST00000498048 EPB41L4AQ9HCS5 686 aaPredicted RBP9.58□□□□□ -0.88
PDZRN3-212ENST00000498048 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.58□□□□□ -0.88
PDZRN3-212ENST00000498048 ATAD5Q96QE3 1844 aa9.58□□□□□ -0.88
PDZRN3-212ENST00000498048 DICER1Q9UPY3 1922 aaKnown RBP9.58□□□□□ -0.88
PDZRN3-212ENST00000498048 GREB1LQ9C091 1923 aaPredicted RBP9.57□□□□□ -0.88
PDZRN3-212ENST00000498048 MAGEB6P1A0A0J9YX57 407 aa9.57□□□□□ -0.88
PDZRN3-212ENST00000498048 KLRG2A4D1S0 409 aaPredicted RBP9.57□□□□□ -0.88
PDZRN3-212ENST00000498048 APPP05067 770 aa9.57□□□□□ -0.88
PDZRN3-212ENST00000498048 GNAT2P19087 354 aa9.57□□□□□ -0.88
PDZRN3-212ENST00000498048 TDO2P48775 406 aa9.57□□□□□ -0.88
PDZRN3-212ENST00000498048 COL9A3Q14050 684 aaPredicted RBP9.57□□□□□ -0.88
PDZRN3-212ENST00000498048 TOB2Q14106 344 aaPredicted RBP9.57□□□□□ -0.88
PDZRN3-212ENST00000498048 NAA16Q6N069 864 aaPredicted RBP9.57□□□□□ -0.88
PDZRN3-212ENST00000498048 Q6ZUG5 572 aa9.57□□□□□ -0.88
PDZRN3-212ENST00000498048 C15orf52Q6ZUT6 534 aaKnown RBP9.57□□□□□ -0.88
PDZRN3-212ENST00000498048 DZIP1Q86YF9 867 aaKnown RBP9.57□□□□□ -0.88
PDZRN3-212ENST00000498048 MIGA1Q8NAN2 632 aa9.57□□□□□ -0.88
PDZRN3-212ENST00000498048 TNPO1Q92973 898 aaKnown RBP9.57□□□□□ -0.88
PDZRN3-212ENST00000498048 LARP6Q9BRS8 491 aaKnown RBP9.57□□□□□ -0.88
PDZRN3-212ENST00000498048 ALDH8A1Q9H2A2 487 aaPredicted RBP9.57□□□□□ -0.88
PDZRN3-212ENST00000498048 NSFL1CQ9UNZ2 370 aaKnown RBP9.57□□□□□ -0.88
PDZRN3-212ENST00000498048 SALL1Q9NSC2 1324 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms