RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 USP48Q86UV5 1035 aa13.61□□□□□ -0.23
SNRNP200-208ENST00000497539 KIAA1551Q9HCM1 1747 aa13.61□□□□□ -0.23
SNRNP200-208ENST00000497539 MAST2Q6P0Q8 1798 aa13.61□□□□□ -0.23
SNRNP200-208ENST00000497539 ZNF804BA4D1E1 1349 aa13.61□□□□□ -0.23
SNRNP200-208ENST00000497539 IRX5P78411 483 aaPredicted RBP13.61□□□□□ -0.23
SNRNP200-208ENST00000497539 DHX32Q7L7V1 743 aaKnown RBP13.61□□□□□ -0.23
SNRNP200-208ENST00000497539 MPHOSPH8Q99549 860 aa13.61□□□□□ -0.23
SNRNP200-208ENST00000497539 TCRBV5S4A2TA0A5A2 114 aa13.6□□□□□ -0.23
SNRNP200-208ENST00000497539 STX6O43752 255 aa13.6□□□□□ -0.23
SNRNP200-208ENST00000497539 EVCP57679 992 aa13.6□□□□□ -0.23
SNRNP200-208ENST00000497539 USP25Q9UHP3 1055 aa13.6□□□□□ -0.23
SNRNP200-208ENST00000497539 TNRC6CQ9HCJ0 1690 aaKnown RBP13.6□□□□□ -0.23
SNRNP200-208ENST00000497539 SYT1P21579 422 aa13.6□□□□□ -0.23
SNRNP200-208ENST00000497539 PHKA1P46020 1223 aa13.6□□□□□ -0.23
SNRNP200-208ENST00000497539 SASS6Q6UVJ0 657 aa13.6□□□□□ -0.23
SNRNP200-208ENST00000497539 PTF1AQ7RTS3 328 aa13.6□□□□□ -0.23
SNRNP200-208ENST00000497539 CCDC83Q8IWF9 413 aa13.6□□□□□ -0.23
SNRNP200-208ENST00000497539 CEP120Q8N960 986 aa13.6□□□□□ -0.23
SNRNP200-208ENST00000497539 TTC12Q9H892 705 aaPredicted RBP13.6□□□□□ -0.23
SNRNP200-208ENST00000497539 PIH1D3Q9NQM4 214 aaKnown RBP13.6□□□□□ -0.23
SNRNP200-208ENST00000497539 SEC31BQ9NQW1 1179 aa13.6□□□□□ -0.23
SNRNP200-208ENST00000497539 PDS5AQ29RF7 1337 aaKnown RBP13.59□□□□□ -0.23
SNRNP200-208ENST00000497539 A0A0G2JS52 829 aa13.59□□□□□ -0.23
SNRNP200-208ENST00000497539 ADRA2BP18089 450 aa13.59□□□□□ -0.23
SNRNP200-208ENST00000497539 PLCB2Q00722 1185 aa13.59□□□□□ -0.23
SNRNP200-208ENST00000497539 COL9A3Q14050 684 aaPredicted RBP13.59□□□□□ -0.23
SNRNP200-208ENST00000497539 ERFEQ4G0M1 354 aa13.59□□□□□ -0.23
SNRNP200-208ENST00000497539 GTF3C6Q969F1 213 aa13.59□□□□□ -0.23
SNRNP200-208ENST00000497539 LLPHQ9BRT6 129 aaKnown RBP13.59□□□□□ -0.23
SNRNP200-208ENST00000497539 BSDC1Q9NW68 430 aaPredicted RBP13.59□□□□□ -0.23
SNRNP200-208ENST00000497539 CCNL1Q9UK58 526 aaPredicted RBP13.59□□□□□ -0.23
SNRNP200-208ENST00000497539 BRWD3Q6RI45 1802 aa13.59□□□□□ -0.23
SNRNP200-208ENST00000497539 E7EWF7 191 aa13.59□□□□□ -0.23
SNRNP200-208ENST00000497539 GJB2P29033 226 aa13.59□□□□□ -0.23
SNRNP200-208ENST00000497539 HSPA1LP34931 641 aa13.59□□□□□ -0.23
SNRNP200-208ENST00000497539 ALX1Q15699 326 aa13.59□□□□□ -0.23
SNRNP200-208ENST00000497539 SPATA5Q8NB90 893 aa13.59□□□□□ -0.23
SNRNP200-208ENST00000497539 CHMP4CQ96CF2 233 aa13.59□□□□□ -0.23
SNRNP200-208ENST00000497539 ATP6V1DQ9Y5K8 247 aa13.59□□□□□ -0.23
SNRNP200-208ENST00000497539 CARMIL3Q8ND23 1372 aa13.59□□□□□ -0.23
SNRNP200-208ENST00000497539 DYNC1I1O14576 645 aa13.58□□□□□ -0.23
SNRNP200-208ENST00000497539 F13A1P00488 732 aa13.58□□□□□ -0.23
SNRNP200-208ENST00000497539 PDCP20941 246 aa13.58□□□□□ -0.23
SNRNP200-208ENST00000497539 MCM5P33992 734 aa13.58□□□□□ -0.23
SNRNP200-208ENST00000497539 KIAA2012Q0VF49 1180 aa13.58□□□□□ -0.23
SNRNP200-208ENST00000497539 TMEM132AQ24JP5 1023 aa13.58□□□□□ -0.23
SNRNP200-208ENST00000497539 TBC1D9BQ66K14 1250 aa13.58□□□□□ -0.23
SNRNP200-208ENST00000497539 PFKFB2O60825 505 aa13.58□□□□□ -0.24
SNRNP200-208ENST00000497539 CHRNDQ07001 517 aa13.58□□□□□ -0.24
SNRNP200-208ENST00000497539 UBE4AQ14139 1066 aa13.58□□□□□ -0.24
SNRNP200-208ENST00000497539 SLFNL1Q499Z3 407 aa13.58□□□□□ -0.24
SNRNP200-208ENST00000497539 MTMR6Q9Y217 621 aa13.58□□□□□ -0.24
SNRNP200-208ENST00000497539 PDE6AP16499 860 aa13.57□□□□□ -0.24
SNRNP200-208ENST00000497539 MEX3CQ5U5Q3 659 aaKnown RBP13.57□□□□□ -0.24
SNRNP200-208ENST00000497539 PI16Q6UXB8 463 aa13.57□□□□□ -0.24
SNRNP200-208ENST00000497539 PUS7LQ9H0K6 701 aaKnown RBP13.57□□□□□ -0.24
SNRNP200-208ENST00000497539 RTCBQ9Y3I0 505 aaKnown RBP13.57□□□□□ -0.24
SNRNP200-208ENST00000497539 GPAA1O43292 621 aa13.57□□□□□ -0.24
SNRNP200-208ENST00000497539 RASGRF1Q13972 1273 aa13.57□□□□□ -0.24
SNRNP200-208ENST00000497539 Q6ZUG5 572 aa13.57□□□□□ -0.24
SNRNP200-208ENST00000497539 ANKRD18AQ8IVF6 992 aa13.57□□□□□ -0.24
SNRNP200-208ENST00000497539 SMARCC2Q8TAQ2 1214 aa13.57□□□□□ -0.24
SNRNP200-208ENST00000497539 CNPY2Q9Y2B0 182 aa13.57□□□□□ -0.24
SNRNP200-208ENST00000497539 MYH15Q9Y2K3 1946 aa13.57□□□□□ -0.24
SNRNP200-208ENST00000497539 CHD4Q14839 1912 aa13.57□□□□□ -0.24
SNRNP200-208ENST00000497539 HMGB2P26583 209 aaKnown RBP13.57□□□□□ -0.24
SNRNP200-208ENST00000497539 IMMTQ16891 758 aaKnown RBP13.57□□□□□ -0.24
SNRNP200-208ENST00000497539 ZNF274Q96GC6 653 aaPredicted RBP13.57□□□□□ -0.24
SNRNP200-208ENST00000497539 DUOX1Q9NRD9 1551 aa13.56□□□□□ -0.24
SNRNP200-208ENST00000497539 WASHC4Q2M389 1173 aa13.56□□□□□ -0.24
SNRNP200-208ENST00000497539 C3orf67Q6ZVT6 689 aa13.56□□□□□ -0.24
SNRNP200-208ENST00000497539 PNPLA7Q6ZV29 1317 aa13.56□□□□□ -0.24
SNRNP200-208ENST00000497539 CACNA1SQ13698 1873 aa13.56□□□□□ -0.24
SNRNP200-208ENST00000497539 MYH13Q9UKX3 1938 aa13.56□□□□□ -0.24
SNRNP200-208ENST00000497539 SEMA3EO15041 775 aa13.56□□□□□ -0.24
SNRNP200-208ENST00000497539 GNPATO15228 680 aa13.56□□□□□ -0.24
SNRNP200-208ENST00000497539 ADCY5O95622 1261 aa13.56□□□□□ -0.24
SNRNP200-208ENST00000497539 SLC9C2Q5TAH2 1124 aa13.56□□□□□ -0.24
SNRNP200-208ENST00000497539 CERS3Q8IU89 383 aa13.56□□□□□ -0.24
SNRNP200-208ENST00000497539 EGFL6Q8IUX8 553 aa13.56□□□□□ -0.24
SNRNP200-208ENST00000497539 MB21D2Q8IYB1 491 aaPredicted RBP13.56□□□□□ -0.24
SNRNP200-208ENST00000497539 SEPT12Q8IYM1 358 aa13.56□□□□□ -0.24
SNRNP200-208ENST00000497539 SYAP1Q96A49 352 aaPredicted RBP13.56□□□□□ -0.24
SNRNP200-208ENST00000497539 ZPR1O75312 459 aa13.55□□□□□ -0.24
SNRNP200-208ENST00000497539 FGAP02671 866 aa13.55□□□□□ -0.24
SNRNP200-208ENST00000497539 NECAB1Q8N987 351 aa13.55□□□□□ -0.24
SNRNP200-208ENST00000497539 SETDB2Q96T68 719 aa13.55□□□□□ -0.24
SNRNP200-208ENST00000497539 ZNF532Q9HCE3 1301 aa13.55□□□□□ -0.24
SNRNP200-208ENST00000497539 MAP3K12Q12852 859 aa13.55□□□□□ -0.24
SNRNP200-208ENST00000497539 SLC27A3Q5K4L6 730 aa13.55□□□□□ -0.24
SNRNP200-208ENST00000497539 ARHGEF1Q92888 912 aaKnown RBP13.55□□□□□ -0.24
SNRNP200-208ENST00000497539 TAF1P21675 1872 aa13.54□□□□□ -0.24
SNRNP200-208ENST00000497539 RGPD3A6NKT7 1758 aaPredicted RBP13.54□□□□□ -0.24
SNRNP200-208ENST00000497539 RGPD4Q7Z3J3 1758 aa13.54□□□□□ -0.24
SNRNP200-208ENST00000497539 SALL1Q9NSC2 1324 aa13.54□□□□□ -0.24
SNRNP200-208ENST00000497539 COL1A1P02452 1464 aaPredicted RBP13.54□□□□□ -0.24
SNRNP200-208ENST00000497539 LRRC37AA6NMS7 1700 aa13.54□□□□□ -0.24
SNRNP200-208ENST00000497539 HELBQ8NG08 1087 aaPredicted RBP13.54□□□□□ -0.24
SNRNP200-208ENST00000497539 STRBPQ96SI9 672 aaKnown RBP13.54□□□□□ -0.24
SNRNP200-208ENST00000497539 NOLC1Q14978 699 aaKnown RBP eCLIP13.54□□□□□ -0.241e-25■□□□□ 9.5
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms