RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 HIF3AQ9Y2N7 669 aa9.97□□□□□ -0.81
MDM2-220ENST00000496959 SCO2A0A1W2PP80 73 aa9.96□□□□□ -0.82
MDM2-220ENST00000496959 POU4F3Q15319 338 aa9.96□□□□□ -0.82
MDM2-220ENST00000496959 ENOX2Q16206 610 aaKnown RBP9.96□□□□□ -0.82
MDM2-220ENST00000496959 RPS26P11Q5JNZ5 115 aaPredicted RBP9.96□□□□□ -0.82
MDM2-220ENST00000496959 DTHD1Q6ZMT9 781 aa9.96□□□□□ -0.82
MDM2-220ENST00000496959 Q8N3U1 123 aa9.96□□□□□ -0.82
MDM2-220ENST00000496959 SMG8Q8ND04 991 aaKnown RBP9.96□□□□□ -0.82
MDM2-220ENST00000496959 BMP3P12645 472 aa9.95□□□□□ -0.82
MDM2-220ENST00000496959 MAPK8P45983 427 aa9.95□□□□□ -0.82
MDM2-220ENST00000496959 FAM20CQ8IXL6 584 aa9.95□□□□□ -0.82
MDM2-220ENST00000496959 GLIS3Q8NEA6 775 aa9.95□□□□□ -0.82
MDM2-220ENST00000496959 NRSN2Q9GZP1 204 aa9.95□□□□□ -0.82
MDM2-220ENST00000496959 KCNF1Q9H3M0 494 aa9.95□□□□□ -0.82
MDM2-220ENST00000496959 DLGAP3O95886 979 aa9.94□□□□□ -0.82
MDM2-220ENST00000496959 MAOBP27338 520 aa9.94□□□□□ -0.82
MDM2-220ENST00000496959 PI16Q6UXB8 463 aa9.94□□□□□ -0.82
MDM2-220ENST00000496959 CLEC10AQ8IUN9 316 aa9.94□□□□□ -0.82
MDM2-220ENST00000496959 AEBP1Q8IUX7 1158 aa9.94□□□□□ -0.82
MDM2-220ENST00000496959 CORO1BQ9BR76 489 aa9.94□□□□□ -0.82
MDM2-220ENST00000496959 BCO2Q9BYV7 579 aa9.94□□□□□ -0.82
MDM2-220ENST00000496959 IGLV1-40P01703 118 aa9.93□□□□□ -0.82
MDM2-220ENST00000496959 XRCC5P13010 732 aaKnown RBP9.93□□□□□ -0.82
MDM2-220ENST00000496959 FCGRTP55899 365 aa9.93□□□□□ -0.82
MDM2-220ENST00000496959 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.93□□□□□ -0.82
MDM2-220ENST00000496959 C7orf69Q9H7B7 122 aa9.93□□□□□ -0.82
MDM2-220ENST00000496959 FMR1Q06787 632 aaKnown RBP eCLIP9.92□□□□□ -0.82
MDM2-220ENST00000496959 AP3B2Q13367 1082 aa9.92□□□□□ -0.82
MDM2-220ENST00000496959 BEND4Q6ZU67 534 aa9.92□□□□□ -0.82
MDM2-220ENST00000496959 TRIM42Q8IWZ5 723 aa9.92□□□□□ -0.82
MDM2-220ENST00000496959 FBF1Q8TES7 1133 aa9.92□□□□□ -0.82
MDM2-220ENST00000496959 FAM83CQ9BQN1 747 aa9.92□□□□□ -0.82
MDM2-220ENST00000496959 RNF112Q9ULX5 631 aa9.92□□□□□ -0.82
MDM2-220ENST00000496959 TIAF1O95411 115 aa9.91□□□□□ -0.82
MDM2-220ENST00000496959 ALG1LQ6GMV1 187 aa9.91□□□□□ -0.82
MDM2-220ENST00000496959 TRIM56Q9BRZ2 755 aaKnown RBP9.91□□□□□ -0.82
MDM2-220ENST00000496959 RAD18Q9NS91 495 aa9.91□□□□□ -0.82
MDM2-220ENST00000496959 HMX2A2RU54 273 aa9.9□□□□□ -0.82
MDM2-220ENST00000496959 RXRBP28702 533 aa9.9□□□□□ -0.82
MDM2-220ENST00000496959 ZNF157P51786 506 aaPredicted RBP9.9□□□□□ -0.82
MDM2-220ENST00000496959 ATP2B2Q01814 1243 aa9.9□□□□□ -0.82
MDM2-220ENST00000496959 SOX4Q06945 474 aaPredicted RBP9.9□□□□□ -0.82
MDM2-220ENST00000496959 NXPE4Q6UWF7 544 aa9.9□□□□□ -0.82
MDM2-220ENST00000496959 DRD2P14416 443 aa9.89□□□□□ -0.83
MDM2-220ENST00000496959 MAP4P27816 1152 aaKnown RBP9.89□□□□□ -0.83
MDM2-220ENST00000496959 USP11P51784 963 aa9.89□□□□□ -0.83
MDM2-220ENST00000496959 PPP2R3AQ06190 1150 aa9.89□□□□□ -0.83
MDM2-220ENST00000496959 FAAP100Q0VG06 881 aa9.89□□□□□ -0.83
MDM2-220ENST00000496959 NFIAQ12857 509 aa9.89□□□□□ -0.83
MDM2-220ENST00000496959 RNF43Q68DV7 783 aa9.89□□□□□ -0.83
MDM2-220ENST00000496959 GPN3Q9UHW5 284 aaPredicted RBP9.89□□□□□ -0.83
MDM2-220ENST00000496959 CTSBP07858 339 aa9.88□□□□□ -0.83
MDM2-220ENST00000496959 LRP8Q14114 963 aa9.88□□□□□ -0.83
MDM2-220ENST00000496959 PDE3AQ14432 1141 aa9.88□□□□□ -0.83
MDM2-220ENST00000496959 SGO2Q562F6 1265 aa9.88□□□□□ -0.83
MDM2-220ENST00000496959 ARTNQ5T4W7 220 aa9.88□□□□□ -0.83
MDM2-220ENST00000496959 DBNDD2Q9BQY9 259 aa9.88□□□□□ -0.83
MDM2-220ENST00000496959 YIPF2Q9BWQ6 316 aa9.88□□□□□ -0.83
MDM2-220ENST00000496959 ZFP64Q9NPA5 681 aa9.88□□□□□ -0.83
MDM2-220ENST00000496959 AKAP2Q9Y2D5 859 aa9.88□□□□□ -0.83
MDM2-220ENST00000496959 HNRNPUQ00839 825 aaKnown RBP eCLIP9.87□□□□□ -0.83
MDM2-220ENST00000496959 SRCIN1Q9C0H9 1055 aa9.87□□□□□ -0.83
MDM2-220ENST00000496959 TMEM39AQ9NV64 488 aa9.87□□□□□ -0.83
MDM2-220ENST00000496959 GIPC1O14908 333 aa9.86□□□□□ -0.83
MDM2-220ENST00000496959 ECEL1O95672 775 aa9.86□□□□□ -0.83
MDM2-220ENST00000496959 ADH5P11766 374 aa9.86□□□□□ -0.83
MDM2-220ENST00000496959 AKAP4Q5JQC9 854 aa9.86□□□□□ -0.83
MDM2-220ENST00000496959 SND1Q7KZF4 910 aaKnown RBP eCLIP9.86□□□□□ -0.83
MDM2-220ENST00000496959 C2CD4AQ8NCU7 369 aaPredicted RBP9.86□□□□□ -0.83
MDM2-220ENST00000496959 GSTT1P30711 240 aa9.85□□□□□ -0.83
MDM2-220ENST00000496959 XP32Q5T750 250 aa9.85□□□□□ -0.83
MDM2-220ENST00000496959 WWC3Q9ULE0 1092 aa9.85□□□□□ -0.83
MDM2-220ENST00000496959 SPG7Q9UQ90 795 aa9.85□□□□□ -0.83
MDM2-220ENST00000496959 FAM95CA0A1B0GW59 222 aa9.84□□□□□ -0.83
MDM2-220ENST00000496959 AOC2O75106 756 aa9.84□□□□□ -0.83
MDM2-220ENST00000496959 NFKBIBQ15653 356 aa9.84□□□□□ -0.83
MDM2-220ENST00000496959 PAOXQ6QHF9 649 aa9.84□□□□□ -0.83
MDM2-220ENST00000496959 DYMQ7RTS9 669 aa9.84□□□□□ -0.83
MDM2-220ENST00000496959 FBLIM1Q8WUP2 373 aa9.84□□□□□ -0.83
MDM2-220ENST00000496959 SETDB2Q96T68 719 aa9.84□□□□□ -0.83
MDM2-220ENST00000496959 AP4E1Q9UPM8 1137 aa9.84□□□□□ -0.83
MDM2-220ENST00000496959 HYAL3O43820 417 aaPredicted RBP9.83□□□□□ -0.84
MDM2-220ENST00000496959 GSTP1P09211 210 aaKnown RBP9.83□□□□□ -0.84
MDM2-220ENST00000496959 CDPF1Q6NVV7 123 aa9.83□□□□□ -0.84
MDM2-220ENST00000496959 GIMAP7Q8NHV1 300 aa9.83□□□□□ -0.84
MDM2-220ENST00000496959 SYNGAP1Q96PV0 1343 aa9.82□□□□□ -0.84
MDM2-220ENST00000496959 LDHBP07195 334 aaKnown RBP9.82□□□□□ -0.84
MDM2-220ENST00000496959 P4HBP07237 508 aaKnown RBP9.82□□□□□ -0.84
MDM2-220ENST00000496959 NBPF11Q86T75 865 aa9.82□□□□□ -0.84
MDM2-220ENST00000496959 ZDHHC13Q8IUH4 622 aa9.82□□□□□ -0.84
MDM2-220ENST00000496959 WDR18Q9BV38 432 aa9.82□□□□□ -0.84
MDM2-220ENST00000496959 OSBPL7Q9BZF2 842 aa9.82□□□□□ -0.84
MDM2-220ENST00000496959 ZC3H12CQ9C0D7 883 aaKnown RBP9.82□□□□□ -0.84
MDM2-220ENST00000496959 ACTL7BQ9Y614 415 aa9.82□□□□□ -0.84
MDM2-220ENST00000496959 TGFB1P01137 390 aa9.81□□□□□ -0.84
MDM2-220ENST00000496959 SLFN14P0C7P3 912 aa9.81□□□□□ -0.84
MDM2-220ENST00000496959 LIG1P18858 919 aa9.81□□□□□ -0.84
MDM2-220ENST00000496959 C3orf58Q8NDZ4 430 aa9.81□□□□□ -0.84
MDM2-220ENST00000496959 SHKBP1Q8TBC3 707 aa9.81□□□□□ -0.84
MDM2-220ENST00000496959 EZH1Q92800 747 aaPredicted RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms