RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 VPS37DQ86XT2 251 aa18.03■□□□□ 0.48
VARS-228ENST00000495010 DZIP1LQ8IYY4 767 aaKnown RBP18.03■□□□□ 0.48
VARS-228ENST00000495010 A0A1B0GUL6 1792 aa18.03■□□□□ 0.48
VARS-228ENST00000495010 LAMB1P07942 1786 aa18.03■□□□□ 0.48
VARS-228ENST00000495010 EN2P19622 333 aaPredicted RBP18.02■□□□□ 0.48
VARS-228ENST00000495010 WDR63Q8IWG1 891 aa18.02■□□□□ 0.48
VARS-228ENST00000495010 FRAT2O75474 233 aaPredicted RBP18.01■□□□□ 0.47
VARS-228ENST00000495010 CRKP46108 304 aa18.01■□□□□ 0.47
VARS-228ENST00000495010 SLC4A8Q2Y0W8 1093 aa18.01■□□□□ 0.47
VARS-228ENST00000495010 SLC9C1Q4G0N8 1177 aa18.01■□□□□ 0.47
VARS-228ENST00000495010 SLC4A10Q6U841 1118 aa18.01■□□□□ 0.47
VARS-228ENST00000495010 MS4A4AQ96JQ5 239 aa18.01■□□□□ 0.47
VARS-228ENST00000495010 TMEM39BQ9GZU3 492 aa18.01■□□□□ 0.47
VARS-228ENST00000495010 VGLL4Q14135 290 aa18■□□□□ 0.47
VARS-228ENST00000495010 KIF22Q14807 665 aa18■□□□□ 0.47
VARS-228ENST00000495010 PPP1R3FQ6ZSY5 799 aaPredicted RBP18■□□□□ 0.47
VARS-228ENST00000495010 BRI3BPQ8WY22 251 aa18■□□□□ 0.47
VARS-228ENST00000495010 OTUD5Q96G74 571 aa18■□□□□ 0.47
VARS-228ENST00000495010 FAM84BQ96KN1 310 aaPredicted RBP18■□□□□ 0.47
VARS-228ENST00000495010 TEPSINQ96N21 525 aa18■□□□□ 0.47
VARS-228ENST00000495010 ALDH1L1O75891 902 aa17.99■□□□□ 0.47
VARS-228ENST00000495010 CHAF1AQ13111 956 aaPredicted RBP17.99■□□□□ 0.47
VARS-228ENST00000495010 CNKSR2Q8WXI2 1034 aa17.99■□□□□ 0.47
VARS-228ENST00000495010 ZNF333Q96JL9 665 aa17.99■□□□□ 0.47
VARS-228ENST00000495010 SRCIN1Q9C0H9 1055 aa17.99■□□□□ 0.47
VARS-228ENST00000495010 TMOD2Q9NZR1 351 aa17.99■□□□□ 0.47
VARS-228ENST00000495010 RBBP6Q7Z6E9 1792 aaKnown RBP17.99■□□□□ 0.47
VARS-228ENST00000495010 OTOFQ9HC10 1997 aa17.99■□□□□ 0.47
VARS-228ENST00000495010 MROH5Q6ZUA9 1318 aa17.98■□□□□ 0.47
VARS-228ENST00000495010 CAVIN4Q5BKX8 364 aa17.98■□□□□ 0.47
VARS-228ENST00000495010 CDAN1Q8IWY9 1227 aa17.98■□□□□ 0.47
VARS-228ENST00000495010 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.98■□□□□ 0.475e-6■□□□□ 10.2
VARS-228ENST00000495010 TBC1D22AQ8WUA7 517 aa17.98■□□□□ 0.47
VARS-228ENST00000495010 HOOK2Q96ED9 719 aa17.98■□□□□ 0.47
VARS-228ENST00000495010 PUS3Q9BZE2 481 aaKnown RBP17.98■□□□□ 0.47
VARS-228ENST00000495010 MRS2Q9HD23 443 aa17.98■□□□□ 0.47
VARS-228ENST00000495010 PTCH2Q9Y6C5 1203 aa17.98■□□□□ 0.47
VARS-228ENST00000495010 CETPP11597 493 aa17.97■□□□□ 0.47
VARS-228ENST00000495010 FAM43AQ8N2R8 423 aa17.97■□□□□ 0.47
VARS-228ENST00000495010 TEKT1Q969V4 418 aa17.97■□□□□ 0.47
VARS-228ENST00000495010 IQSEC3Q9UPP2 1182 aaPredicted RBP17.97■□□□□ 0.47
VARS-228ENST00000495010 HDLBPQ00341 1268 aaKnown RBP17.96■□□□□ 0.47
VARS-228ENST00000495010 CAP1Q01518 475 aa17.96■□□□□ 0.47
VARS-228ENST00000495010 SUCLG2Q96I99 432 aa17.96■□□□□ 0.47
VARS-228ENST00000495010 SPDYE5A6NIY4 337 aa17.95■□□□□ 0.46
VARS-228ENST00000495010 MYCP01106 439 aaPredicted RBP17.95■□□□□ 0.46
VARS-228ENST00000495010 CACNB3P54284 484 aa17.95■□□□□ 0.46
VARS-228ENST00000495010 SNAPC2Q13487 334 aa17.95■□□□□ 0.46
VARS-228ENST00000495010 METTL24Q5JXM2 366 aa17.95■□□□□ 0.46
VARS-228ENST00000495010 FBXO33Q7Z6M2 555 aa17.95■□□□□ 0.46
VARS-228ENST00000495010 ERO1BQ86YB8 467 aa17.95■□□□□ 0.46
VARS-228ENST00000495010 WRNIP1Q96S55 665 aa17.95■□□□□ 0.46
VARS-228ENST00000495010 RIPOR2Q9Y4F9 1068 aa17.95■□□□□ 0.46
VARS-228ENST00000495010 ARAP2Q8WZ64 1704 aa17.95■□□□□ 0.46
VARS-228ENST00000495010 TLR2O60603 784 aa17.94■□□□□ 0.46
VARS-228ENST00000495010 ZCCHC17Q9NP64 241 aaKnown RBP17.94■□□□□ 0.46
VARS-228ENST00000495010 MAST3O60307 1309 aa17.94■□□□□ 0.46
VARS-228ENST00000495010 KIAA0100Q14667 2235 aaKnown RBP17.94■□□□□ 0.46
VARS-228ENST00000495010 GNRH1P01148 92 aa17.93■□□□□ 0.46
VARS-228ENST00000495010 GRIK5Q16478 980 aa17.93■□□□□ 0.46
VARS-228ENST00000495010 DCAF15Q66K64 600 aa17.93■□□□□ 0.46
VARS-228ENST00000495010 SNCAIPQ9Y6H5 919 aa17.93■□□□□ 0.46
VARS-228ENST00000495010 BTBD19C9JJ37 291 aa17.92■□□□□ 0.46
VARS-228ENST00000495010 NBPF7P0C2Y1 421 aaPredicted RBP17.92■□□□□ 0.46
VARS-228ENST00000495010 PRMT2P55345 433 aa17.92■□□□□ 0.46
VARS-228ENST00000495010 LACTBP83111 547 aaPredicted RBP17.92■□□□□ 0.46
VARS-228ENST00000495010 FAM83AQ86UY5 434 aa17.92■□□□□ 0.46
VARS-228ENST00000495010 SH3TC2Q8TF17 1288 aa17.92■□□□□ 0.46
VARS-228ENST00000495010 ZKSCAN4Q969J2 545 aaPredicted RBP17.92■□□□□ 0.46
VARS-228ENST00000495010 ZDHHC15Q96MV8 337 aa17.92■□□□□ 0.46
VARS-228ENST00000495010 MRIQ9BWK5 157 aa17.92■□□□□ 0.46
VARS-228ENST00000495010 BICC1Q9H694 974 aaKnown RBP17.92■□□□□ 0.46
VARS-228ENST00000495010 IRF6O14896 467 aa17.91■□□□□ 0.46
VARS-228ENST00000495010 PDE8BO95263 885 aa17.91■□□□□ 0.46
VARS-228ENST00000495010 PPIL2Q13356 520 aa17.91■□□□□ 0.46
VARS-228ENST00000495010 LRRC24Q50LG9 513 aa17.91■□□□□ 0.46
VARS-228ENST00000495010 FKBP1CQ5VVH2 108 aa17.91■□□□□ 0.46
VARS-228ENST00000495010 KAZALD1Q96I82 304 aa17.91■□□□□ 0.46
VARS-228ENST00000495010 ZNF341Q9BYN7 854 aa17.91■□□□□ 0.46
VARS-228ENST00000495010 ARHGAP39Q9C0H5 1083 aa17.91■□□□□ 0.46
VARS-228ENST00000495010 ECM2O94769 699 aaPredicted RBP17.9■□□□□ 0.46
VARS-228ENST00000495010 IFIT1P09914 478 aaKnown RBP17.9■□□□□ 0.46
VARS-228ENST00000495010 BCAMP50895 628 aa17.9■□□□□ 0.46
VARS-228ENST00000495010 SPINK5Q9NQ38 1064 aaPredicted RBP17.9■□□□□ 0.46
VARS-228ENST00000495010 COLQQ9Y215 455 aaPredicted RBP17.9■□□□□ 0.46
VARS-228ENST00000495010 SUGT1Q9Y2Z0 365 aa17.9■□□□□ 0.46
VARS-228ENST00000495010 ANP32CO43423 234 aa17.89■□□□□ 0.45
VARS-228ENST00000495010 HOXD10P28358 340 aa17.89■□□□□ 0.45
VARS-228ENST00000495010 ZEB1P37275 1124 aaPredicted RBP17.89■□□□□ 0.45
VARS-228ENST00000495010 FXR1P51114 621 aaKnown RBP eCLIP17.89■□□□□ 0.459e-6■■■□□ 16.8
VARS-228ENST00000495010 PPATQ06203 517 aa17.89■□□□□ 0.45
VARS-228ENST00000495010 MIGA2Q7L4E1 593 aa17.89■□□□□ 0.45
VARS-228ENST00000495010 UTYO14607 1347 aa17.89■□□□□ 0.45
VARS-228ENST00000495010 RABL6Q3YEC7 729 aaPredicted RBP17.88■□□□□ 0.45
VARS-228ENST00000495010 APOBEC3HQ6NTF7 200 aaKnown RBP17.88■□□□□ 0.45
VARS-228ENST00000495010 HHIPL2Q6UWX4 724 aa17.88■□□□□ 0.45
VARS-228ENST00000495010 FMNL1O95466 1100 aaPredicted RBP17.87■□□□□ 0.45
VARS-228ENST00000495010 PUM3Q15397 648 aaKnown RBP17.87■□□□□ 0.45
VARS-228ENST00000495010 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.87■□□□□ 0.45
VARS-228ENST00000495010 RAET1EQ8TD07 263 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms