RNA–Protein interactions for RNA: ENST00000494243.5

TTC3-224, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-224ENST00000494243 FGFR2P21802 821 aa29.97■■■□□ 2.39
TTC3-224ENST00000494243 CHAF1AQ13111 956 aaPredicted RBP29.97■■■□□ 2.39
TTC3-224ENST00000494243 TNFAIP1Q13829 316 aa29.97■■■□□ 2.39
TTC3-224ENST00000494243 PKN2Q16513 984 aaKnown RBP29.97■■■□□ 2.39
TTC3-224ENST00000494243 IFNL1Q8IU54 200 aa29.97■■■□□ 2.39
TTC3-224ENST00000494243 CDAN1Q8IWY9 1227 aa29.97■■■□□ 2.39
TTC3-224ENST00000494243 SMC4Q9NTJ3 1288 aa29.97■■■□□ 2.39
TTC3-224ENST00000494243 GJA5P36382 358 aa29.96■■■□□ 2.39
TTC3-224ENST00000494243 IREB2P48200 963 aaKnown RBP29.96■■■□□ 2.39
TTC3-224ENST00000494243 HPS5Q9UPZ3 1129 aa29.96■■■□□ 2.39
TTC3-224ENST00000494243 LAMB1P07942 1786 aa29.95■■■□□ 2.39
TTC3-224ENST00000494243 ALDH1A1P00352 501 aa29.95■■■□□ 2.39
TTC3-224ENST00000494243 SOX10P56693 466 aa29.95■■■□□ 2.39
TTC3-224ENST00000494243 HDLBPQ00341 1268 aaKnown RBP29.95■■■□□ 2.39
TTC3-224ENST00000494243 TBC1D22AQ8WUA7 517 aa29.95■■■□□ 2.39
TTC3-224ENST00000494243 TCP10L2B9ZVM9 353 aa29.94■■■□□ 2.38
TTC3-224ENST00000494243 IGF2BP3O00425 579 aaKnown RBP eCLIP29.94■■■□□ 2.38
TTC3-224ENST00000494243 FKTNO75072 461 aa29.94■■■□□ 2.38
TTC3-224ENST00000494243 FRAT2O75474 233 aaPredicted RBP29.94■■■□□ 2.38
TTC3-224ENST00000494243 PUM3Q15397 648 aaKnown RBP29.94■■■□□ 2.38
TTC3-224ENST00000494243 ANKRD13AQ8IZ07 590 aa29.94■■■□□ 2.38
TTC3-224ENST00000494243 KIF16BQ96L93 1317 aa29.94■■■□□ 2.38
TTC3-224ENST00000494243 EYA2O00167 538 aa29.93■■■□□ 2.38
TTC3-224ENST00000494243 TMEM39BQ9GZU3 492 aa29.93■■■□□ 2.38
TTC3-224ENST00000494243 ATG9AQ7Z3C6 839 aa29.92■■■□□ 2.38
TTC3-224ENST00000494243 MRIQ9BWK5 157 aa29.92■■■□□ 2.38
TTC3-224ENST00000494243 IFIT1P09914 478 aaKnown RBP29.91■■■□□ 2.38
TTC3-224ENST00000494243 PPP1R3FQ6ZSY5 799 aaPredicted RBP29.9■■■□□ 2.38
TTC3-224ENST00000494243 TEKT1Q969V4 418 aa29.9■■■□□ 2.38
TTC3-224ENST00000494243 NOB1Q9ULX3 412 aaKnown RBP29.9■■■□□ 2.38
TTC3-224ENST00000494243 OTOFQ9HC10 1997 aa29.9■■■□□ 2.38
TTC3-224ENST00000494243 CT47B1P0C2W7 299 aaPredicted RBP29.89■■■□□ 2.38
TTC3-224ENST00000494243 TNNI2P48788 182 aa29.89■■■□□ 2.38
TTC3-224ENST00000494243 ZDHHC15Q96MV8 337 aa29.89■■■□□ 2.38
TTC3-224ENST00000494243 TESPA1A2RU30 521 aaPredicted RBP29.88■■■□□ 2.37
TTC3-224ENST00000494243 CACNB3P54284 484 aa29.88■■■□□ 2.37
TTC3-224ENST00000494243 APOBEC3HQ6NTF7 200 aaKnown RBP29.88■■■□□ 2.37
TTC3-224ENST00000494243 FBXO46Q6PJ61 603 aaPredicted RBP29.88■■■□□ 2.37
TTC3-224ENST00000494243 LPIN2Q92539 896 aa29.88■■■□□ 2.37
TTC3-224ENST00000494243 PTPN18Q99952 460 aa29.88■■■□□ 2.37
TTC3-224ENST00000494243 ELP3Q9H9T3 547 aa29.88■■■□□ 2.37
TTC3-224ENST00000494243 SUGT1Q9Y2Z0 365 aa29.88■■■□□ 2.37
TTC3-224ENST00000494243 UBTFL1P0CB47 393 aaPredicted RBP29.87■■■□□ 2.37
TTC3-224ENST00000494243 OPTNQ96CV9 577 aa29.87■■■□□ 2.37
TTC3-224ENST00000494243 SLC5A1P13866 664 aa29.86■■■□□ 2.37
TTC3-224ENST00000494243 MAP3K9P80192 1104 aa29.85■■■□□ 2.37
TTC3-224ENST00000494243 DDX55Q8NHQ9 600 aaKnown RBP eCLIP29.85■■■□□ 2.371e-9■□□□□ 8.5
TTC3-224ENST00000494243 CNKSR2Q8WXI2 1034 aa29.85■■■□□ 2.37
TTC3-224ENST00000494243 MS4A4AQ96JQ5 239 aa29.85■■■□□ 2.37
TTC3-224ENST00000494243 VGLL4Q14135 290 aa29.84■■■□□ 2.37
TTC3-224ENST00000494243 HHIPL2Q6UWX4 724 aa29.84■■■□□ 2.37
TTC3-224ENST00000494243 SIL1Q9H173 461 aa29.84■■■□□ 2.37
TTC3-224ENST00000494243 FBXO3Q9UK99 471 aa29.84■■■□□ 2.37
TTC3-224ENST00000494243 TNRC18O15417 2968 aaPredicted RBP29.83■■■□□ 2.37
TTC3-224ENST00000494243 MAST3O60307 1309 aa29.83■■■□□ 2.37
TTC3-224ENST00000494243 CIAO1O76071 339 aa29.83■■■□□ 2.37
TTC3-224ENST00000494243 CRHR2Q13324 411 aa29.83■■■□□ 2.37
TTC3-224ENST00000494243 FKBP1CQ5VVH2 108 aa29.83■■■□□ 2.37
TTC3-224ENST00000494243 API5Q9BZZ5 524 aaKnown RBP29.83■■■□□ 2.37
TTC3-224ENST00000494243 CCER2I3L3R5 266 aa29.82■■■□□ 2.36
TTC3-224ENST00000494243 OTUD7BQ6GQQ9 843 aa29.82■■■□□ 2.36
TTC3-224ENST00000494243 FAM83AQ86UY5 434 aa29.82■■■□□ 2.36
TTC3-224ENST00000494243 WDR66Q8TBY9 1149 aa29.82■■■□□ 2.36
TTC3-224ENST00000494243 LRRFIP2Q9Y608 721 aaKnown RBP29.82■■■□□ 2.36
TTC3-224ENST00000494243 CEP126Q9P2H0 1117 aa29.81■■■□□ 2.36
TTC3-224ENST00000494243 RARSP54136 660 aaKnown RBP29.8■■■□□ 2.36
TTC3-224ENST00000494243 OTOP1Q7RTM1 612 aa29.8■■■□□ 2.36
TTC3-224ENST00000494243 TMOD2Q9NZR1 351 aa29.8■■■□□ 2.36
TTC3-224ENST00000494243 ATP2B3Q16720 1220 aa29.79■■■□□ 2.36
TTC3-224ENST00000494243 BRI3BPQ8WY22 251 aa29.79■■■□□ 2.36
TTC3-224ENST00000494243 MEIS3Q99687 375 aa29.79■■■□□ 2.36
TTC3-224ENST00000494243 PA2G4Q9UQ80 394 aaKnown RBP29.79■■■□□ 2.36
TTC3-224ENST00000494243 TRIM17Q9Y577 477 aa29.79■■■□□ 2.36
TTC3-224ENST00000494243 CSADQ9Y600 493 aa29.78■■■□□ 2.36
TTC3-224ENST00000494243 MYH13Q9UKX3 1938 aa29.78■■■□□ 2.36
TTC3-224ENST00000494243 IL15P40933 162 aaPredicted RBP29.77■■■□□ 2.36
TTC3-224ENST00000494243 OTUD5Q96G74 571 aa29.77■■■□□ 2.36
TTC3-224ENST00000494243 SNCAIPQ9Y6H5 919 aa29.77■■■□□ 2.36
TTC3-224ENST00000494243 GTF2A2P52657 109 aa29.76■■■□□ 2.35
TTC3-224ENST00000494243 ARHGAP45Q92619 1136 aa29.76■■■□□ 2.35
TTC3-224ENST00000494243 COPRSQ9NQ92 184 aa29.76■■■□□ 2.35
TTC3-224ENST00000494243 HDAC5Q9UQL6 1122 aa29.76■■■□□ 2.35
TTC3-224ENST00000494243 DAGLAQ9Y4D2 1042 aa29.76■■■□□ 2.35
TTC3-224ENST00000494243 CCL15-CCL14A0A0B4J2E2 113 aa29.75■■■□□ 2.35
TTC3-224ENST00000494243 SPDYE5A6NIY4 337 aa29.75■■■□□ 2.35
TTC3-224ENST00000494243 PRDX5P30044 214 aa29.75■■■□□ 2.35
TTC3-224ENST00000494243 CAP1Q01518 475 aa29.75■■■□□ 2.35
TTC3-224ENST00000494243 DIXDC1Q155Q3 683 aa29.75■■■□□ 2.35
TTC3-224ENST00000494243 CCL15Q16663 113 aa29.75■■■□□ 2.35
TTC3-224ENST00000494243 INTS3Q68E01 1043 aaKnown RBP29.75■■■□□ 2.35
TTC3-224ENST00000494243 CD99L2Q8TCZ2 262 aa29.75■■■□□ 2.35
TTC3-224ENST00000494243 ERO1AQ96HE7 468 aa29.75■■■□□ 2.35
TTC3-224ENST00000494243 RPAP1Q9BWH6 1393 aaPredicted RBP29.75■■■□□ 2.35
TTC3-224ENST00000494243 PHKA1P46020 1223 aa29.74■■■□□ 2.35
TTC3-224ENST00000494243 ZKSCAN4Q969J2 545 aaPredicted RBP29.74■■■□□ 2.35
TTC3-224ENST00000494243 HOOK2Q96ED9 719 aa29.74■■■□□ 2.35
TTC3-224ENST00000494243 WRNIP1Q96S55 665 aa29.74■■■□□ 2.35
TTC3-224ENST00000494243 GNL3LQ9NVN8 582 aaKnown RBP29.74■■■□□ 2.35
TTC3-224ENST00000494243 SP3Q02447 781 aa29.73■■■□□ 2.35
TTC3-224ENST00000494243 CDC42EP5Q6NZY7 148 aa29.73■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms