RNA–Protein interactions for RNA: ENST00000494195.1

HMGB3P14-201, Transcript of high mobility group box 3 pseudogene 14, humanhuman

BASIC

Gene HMGB3P14, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P14-201ENST00000494195 ITGAEP38570 1179 aa12.39□□□□□ -0.43
HMGB3P14-201ENST00000494195 TXNRD3Q86VQ6 643 aa12.39□□□□□ -0.43
HMGB3P14-201ENST00000494195 WFDC12Q8WWY7 111 aa12.39□□□□□ -0.43
HMGB3P14-201ENST00000494195 NRSN2Q9GZP1 204 aa12.39□□□□□ -0.43
HMGB3P14-201ENST00000494195 TMEM39AQ9NV64 488 aa12.39□□□□□ -0.43
HMGB3P14-201ENST00000494195 CYP11A1P05108 521 aa12.38□□□□□ -0.43
HMGB3P14-201ENST00000494195 GATA4P43694 442 aa12.38□□□□□ -0.43
HMGB3P14-201ENST00000494195 ZNF157P51786 506 aaPredicted RBP12.38□□□□□ -0.43
HMGB3P14-201ENST00000494195 PPP2R3AQ06190 1150 aa12.38□□□□□ -0.43
HMGB3P14-201ENST00000494195 GPAT2Q6NUI2 795 aa12.38□□□□□ -0.43
HMGB3P14-201ENST00000494195 KIAA1211Q6ZU35 1233 aa12.38□□□□□ -0.43
HMGB3P14-201ENST00000494195 TRIM56Q9BRZ2 755 aaKnown RBP12.38□□□□□ -0.43
HMGB3P14-201ENST00000494195 USP26Q9BXU7 913 aa12.38□□□□□ -0.43
HMGB3P14-201ENST00000494195 CEP44Q9C0F1 390 aa12.38□□□□□ -0.43
HMGB3P14-201ENST00000494195 MRS2Q9HD23 443 aa12.38□□□□□ -0.43
HMGB3P14-201ENST00000494195 SORBS3O60504 671 aa12.37□□□□□ -0.43
HMGB3P14-201ENST00000494195 IGHA1P01876 353 aa12.37□□□□□ -0.43
HMGB3P14-201ENST00000494195 ZNF16P17020 682 aaPredicted RBP12.37□□□□□ -0.43
HMGB3P14-201ENST00000494195 NOS3P29474 1203 aa12.37□□□□□ -0.43
HMGB3P14-201ENST00000494195 LOC100289279A0A1B0GTE1 492 aa12.36□□□□□ -0.43
HMGB3P14-201ENST00000494195 MSTNO14793 375 aa12.36□□□□□ -0.43
HMGB3P14-201ENST00000494195 IREB2P48200 963 aaKnown RBP12.36□□□□□ -0.43
HMGB3P14-201ENST00000494195 AP3B2Q13367 1082 aa12.36□□□□□ -0.43
HMGB3P14-201ENST00000494195 RGS22Q8NE09 1264 aa12.36□□□□□ -0.43
HMGB3P14-201ENST00000494195 SPOCK3Q9BQ16 436 aa12.36□□□□□ -0.43
HMGB3P14-201ENST00000494195 BCL11AQ9H165 835 aa12.36□□□□□ -0.43
HMGB3P14-201ENST00000494195 ALX3O95076 343 aa12.35□□□□□ -0.43
HMGB3P14-201ENST00000494195 PROCP04070 461 aa12.35□□□□□ -0.43
HMGB3P14-201ENST00000494195 POU4F3Q15319 338 aa12.35□□□□□ -0.43
HMGB3P14-201ENST00000494195 TPTE2Q6XPS3 522 aa12.35□□□□□ -0.43
HMGB3P14-201ENST00000494195 AGGF1Q8N302 714 aaeCLIP12.35□□□□□ -0.43
HMGB3P14-201ENST00000494195 RUSC1Q9BVN2 902 aa12.35□□□□□ -0.43
HMGB3P14-201ENST00000494195 TTF2Q9UNY4 1162 aaKnown RBP12.35□□□□□ -0.43
HMGB3P14-201ENST00000494195 RBM47A0AV96 593 aaKnown RBP12.34□□□□□ -0.43
HMGB3P14-201ENST00000494195 MAOBP27338 520 aa12.34□□□□□ -0.43
HMGB3P14-201ENST00000494195 Q6ZS46 218 aa12.34□□□□□ -0.43
HMGB3P14-201ENST00000494195 NECAB3Q96P71 396 aaPredicted RBP12.34□□□□□ -0.43
HMGB3P14-201ENST00000494195 CORO1BQ9BR76 489 aa12.34□□□□□ -0.43
HMGB3P14-201ENST00000494195 RNF208Q9H0X6 261 aa12.34□□□□□ -0.43
HMGB3P14-201ENST00000494195 PODXL2Q9NZ53 605 aa12.34□□□□□ -0.43
HMGB3P14-201ENST00000494195 VTI1BQ9UEU0 232 aa12.34□□□□□ -0.43
HMGB3P14-201ENST00000494195 FBXO24O75426 580 aa12.33□□□□□ -0.44
HMGB3P14-201ENST00000494195 MEGF11A6BM72 1044 aa12.32□□□□□ -0.44
HMGB3P14-201ENST00000494195 HP1BP3Q5SSJ5 553 aaPredicted RBP12.32□□□□□ -0.44
HMGB3P14-201ENST00000494195 ENC1O14682 589 aa12.31□□□□□ -0.44
HMGB3P14-201ENST00000494195 DLGAP3O95886 979 aa12.31□□□□□ -0.44
HMGB3P14-201ENST00000494195 CTSHP09668 335 aa12.31□□□□□ -0.44
HMGB3P14-201ENST00000494195 CRELD1Q96HD1 420 aa12.31□□□□□ -0.44
HMGB3P14-201ENST00000494195 CTSBP07858 339 aa12.3□□□□□ -0.44
HMGB3P14-201ENST00000494195 EXOSC6Q5RKV6 272 aaKnown RBP12.3□□□□□ -0.44
HMGB3P14-201ENST00000494195 SV2BQ7L1I2 683 aa12.3□□□□□ -0.44
HMGB3P14-201ENST00000494195 SULF2Q8IWU5 870 aa12.3□□□□□ -0.44
HMGB3P14-201ENST00000494195 MEGF10Q96KG7 1140 aa12.3□□□□□ -0.44
HMGB3P14-201ENST00000494195 TMPRSS13Q9BYE2 586 aa12.3□□□□□ -0.44
HMGB3P14-201ENST00000494195 CEP41Q9BYV8 373 aa12.3□□□□□ -0.44
HMGB3P14-201ENST00000494195 ECEL1O95672 775 aa12.29□□□□□ -0.44
HMGB3P14-201ENST00000494195 GLB1P16278 677 aa12.29□□□□□ -0.44
HMGB3P14-201ENST00000494195 NME2P22392 152 aa12.29□□□□□ -0.44
HMGB3P14-201ENST00000494195 MRPL58Q14197 206 aaKnown RBP12.29□□□□□ -0.44
HMGB3P14-201ENST00000494195 MEI1Q5TIA1 1274 aa12.29□□□□□ -0.44
HMGB3P14-201ENST00000494195 DZIP1LQ8IYY4 767 aaKnown RBP12.29□□□□□ -0.44
HMGB3P14-201ENST00000494195 SSBP4Q9BWG4 385 aaPredicted RBP12.29□□□□□ -0.44
HMGB3P14-201ENST00000494195 SAMM50Q9Y512 469 aa12.29□□□□□ -0.44
HMGB3P14-201ENST00000494195 TAF1CQ15572 869 aaPredicted RBP12.28□□□□□ -0.44
HMGB3P14-201ENST00000494195 NUTM2GQ5VZR2 741 aa12.28□□□□□ -0.44
HMGB3P14-201ENST00000494195 ANKRD34AQ69YU3 496 aa12.28□□□□□ -0.44
HMGB3P14-201ENST00000494195 EMILIN2Q9BXX0 1053 aa12.28□□□□□ -0.44
HMGB3P14-201ENST00000494195 CELA3AP09093 270 aa12.27□□□□□ -0.45
HMGB3P14-201ENST00000494195 GSTP1P09211 210 aaKnown RBP12.27□□□□□ -0.45
HMGB3P14-201ENST00000494195 ARNTP27540 789 aa12.27□□□□□ -0.45
HMGB3P14-201ENST00000494195 ST13P50502 369 aaKnown RBP12.27□□□□□ -0.45
HMGB3P14-201ENST00000494195 SMG8Q8ND04 991 aaKnown RBP12.27□□□□□ -0.45
HMGB3P14-201ENST00000494195 STK35Q8TDR2 534 aa12.27□□□□□ -0.45
HMGB3P14-201ENST00000494195 SUGCTQ9HAC7 445 aa12.27□□□□□ -0.45
HMGB3P14-201ENST00000494195 CYP4F12Q9HCS2 524 aa12.27□□□□□ -0.45
HMGB3P14-201ENST00000494195 USP31Q70CQ4 1352 aa12.27□□□□□ -0.45
HMGB3P14-201ENST00000494195 PAGE1O75459 146 aa12.26□□□□□ -0.45
HMGB3P14-201ENST00000494195 PDE3AQ14432 1141 aa12.26□□□□□ -0.45
HMGB3P14-201ENST00000494195 CCDC85BQ15834 202 aaPredicted RBP12.26□□□□□ -0.45
HMGB3P14-201ENST00000494195 FDX2Q6P4F2 183 aa12.26□□□□□ -0.45
HMGB3P14-201ENST00000494195 PDZD3Q86UT5 571 aa12.26□□□□□ -0.45
HMGB3P14-201ENST00000494195 TPSG1Q9NRR2 321 aa12.26□□□□□ -0.45
HMGB3P14-201ENST00000494195 UBL7Q96S82 380 aaPredicted RBP12.25□□□□□ -0.45
HMGB3P14-201ENST00000494195 HNRNPUQ00839 825 aaKnown RBP eCLIP12.24□□□□□ -0.45
HMGB3P14-201ENST00000494195 DOC2BQ14184 412 aa12.24□□□□□ -0.45
HMGB3P14-201ENST00000494195 CCDC86Q9H6F5 360 aaKnown RBP12.24□□□□□ -0.45
HMGB3P14-201ENST00000494195 KRT82Q9NSB4 513 aa12.24□□□□□ -0.45
HMGB3P14-201ENST00000494195 BMP6P22004 513 aa12.23□□□□□ -0.45
HMGB3P14-201ENST00000494195 UVSSAQ2YD98 709 aa12.23□□□□□ -0.45
HMGB3P14-201ENST00000494195 PCNX4Q63HM2 1172 aa12.23□□□□□ -0.45
HMGB3P14-201ENST00000494195 KCNB2Q92953 911 aa12.23□□□□□ -0.45
HMGB3P14-201ENST00000494195 TP53INP1Q96A56 240 aa12.23□□□□□ -0.45
HMGB3P14-201ENST00000494195 FAM46AQ96IP4 442 aaKnown RBP12.23□□□□□ -0.45
HMGB3P14-201ENST00000494195 ZC3H12CQ9C0D7 883 aaKnown RBP12.23□□□□□ -0.45
HMGB3P14-201ENST00000494195 CBX8Q9HC52 389 aa12.23□□□□□ -0.45
HMGB3P14-201ENST00000494195 SART1O43290 800 aaKnown RBP12.22□□□□□ -0.45
HMGB3P14-201ENST00000494195 TIAF1O95411 115 aa12.22□□□□□ -0.45
HMGB3P14-201ENST00000494195 ZNF252P-AS1Q0IIN9 211 aa12.22□□□□□ -0.45
HMGB3P14-201ENST00000494195 C12orf50Q8NA57 414 aaPredicted RBP12.22□□□□□ -0.45
HMGB3P14-201ENST00000494195 NOC4LQ9BVI4 516 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms