RNA–Protein interactions for RNA: ENST00000493627.1

NFIA-213, Transcript of nuclear factor I A, humanhuman

TSL 1 (best)

Gene NFIA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-213ENST00000493627 ALDH1L2Q3SY69 923 aa11.44□□□□□ -0.58
NFIA-213ENST00000493627 CAVIN4Q5BKX8 364 aa11.44□□□□□ -0.58
NFIA-213ENST00000493627 DZIP1LQ8IYY4 767 aaKnown RBP11.44□□□□□ -0.58
NFIA-213ENST00000493627 KLHDC4Q8TBB5 520 aa11.44□□□□□ -0.58
NFIA-213ENST00000493627 SLC10A4Q96EP9 437 aa11.44□□□□□ -0.58
NFIA-213ENST00000493627 CFHR5Q9BXR6 569 aa11.44□□□□□ -0.58
NFIA-213ENST00000493627 USP44Q9H0E7 712 aa11.44□□□□□ -0.58
NFIA-213ENST00000493627 TDRD3Q9H7E2 651 aaKnown RBP11.44□□□□□ -0.58
NFIA-213ENST00000493627 SMC4Q9NTJ3 1288 aa11.44□□□□□ -0.58
NFIA-213ENST00000493627 ZNF70Q9UC06 446 aaPredicted RBP11.44□□□□□ -0.58
NFIA-213ENST00000493627 IQSEC3Q9UPP2 1182 aaPredicted RBP11.44□□□□□ -0.58
NFIA-213ENST00000493627 UNCXA6NJT0 531 aa11.43□□□□□ -0.58
NFIA-213ENST00000493627 FRAT2O75474 233 aaPredicted RBP11.43□□□□□ -0.58
NFIA-213ENST00000493627 ALDH1A1P00352 501 aa11.43□□□□□ -0.58
NFIA-213ENST00000493627 PUM3Q15397 648 aaKnown RBP11.43□□□□□ -0.58
NFIA-213ENST00000493627 PKN2Q16513 984 aaKnown RBP11.43□□□□□ -0.58
NFIA-213ENST00000493627 CDAN1Q8IWY9 1227 aa11.43□□□□□ -0.58
NFIA-213ENST00000493627 TBC1D22AQ8WUA7 517 aa11.43□□□□□ -0.58
NFIA-213ENST00000493627 CDCA7LQ96GN5 454 aa11.43□□□□□ -0.58
NFIA-213ENST00000493627 R3HDMLQ9H3Y0 253 aa11.43□□□□□ -0.58
NFIA-213ENST00000493627 HPS5Q9UPZ3 1129 aa11.43□□□□□ -0.58
NFIA-213ENST00000493627 KIF16BQ96L93 1317 aa11.42□□□□□ -0.58
NFIA-213ENST00000493627 LAMB1P07942 1786 aa11.42□□□□□ -0.58
NFIA-213ENST00000493627 OTOFQ9HC10 1997 aa11.42□□□□□ -0.58
NFIA-213ENST00000493627 TCP10L2B9ZVM9 353 aa11.42□□□□□ -0.58
NFIA-213ENST00000493627 FKTNO75072 461 aa11.42□□□□□ -0.58
NFIA-213ENST00000493627 USP2O75604 605 aaPredicted RBP11.42□□□□□ -0.58
NFIA-213ENST00000493627 INHBEP58166 350 aa11.42□□□□□ -0.58
NFIA-213ENST00000493627 IFNL1Q8IU54 200 aa11.42□□□□□ -0.58
NFIA-213ENST00000493627 ANKRD13AQ8IZ07 590 aa11.42□□□□□ -0.58
NFIA-213ENST00000493627 TEPSINQ96N21 525 aa11.42□□□□□ -0.58
NFIA-213ENST00000493627 EYA2O00167 538 aa11.41□□□□□ -0.58
NFIA-213ENST00000493627 IGF2BP3O00425 579 aaKnown RBP eCLIP11.41□□□□□ -0.58
NFIA-213ENST00000493627 IFIT1P09914 478 aaKnown RBP11.41□□□□□ -0.58
NFIA-213ENST00000493627 FGFR2P21802 821 aa11.41□□□□□ -0.58
NFIA-213ENST00000493627 GJA5P36382 358 aa11.41□□□□□ -0.58
NFIA-213ENST00000493627 RFX5P48382 616 aaPredicted RBP11.41□□□□□ -0.58
NFIA-213ENST00000493627 TNNI2P48788 182 aa11.41□□□□□ -0.58
NFIA-213ENST00000493627 BCAMP50895 628 aa11.41□□□□□ -0.58
NFIA-213ENST00000493627 HDLBPQ00341 1268 aaKnown RBP11.41□□□□□ -0.58
NFIA-213ENST00000493627 TEKT1Q969V4 418 aa11.41□□□□□ -0.58
NFIA-213ENST00000493627 TMEM39BQ9GZU3 492 aa11.41□□□□□ -0.58
NFIA-213ENST00000493627 MAST3O60307 1309 aa11.4□□□□□ -0.58
NFIA-213ENST00000493627 CT47B1P0C2W7 299 aaPredicted RBP11.4□□□□□ -0.58
NFIA-213ENST00000493627 UBTFL1P0CB47 393 aaPredicted RBP11.4□□□□□ -0.58
NFIA-213ENST00000493627 SLC5A1P13866 664 aa11.4□□□□□ -0.58
NFIA-213ENST00000493627 FBXO46Q6PJ61 603 aaPredicted RBP11.4□□□□□ -0.58
NFIA-213ENST00000493627 TRMT2AQ8IZ69 625 aaKnown RBP11.4□□□□□ -0.58
NFIA-213ENST00000493627 LPIN2Q92539 896 aa11.4□□□□□ -0.58
NFIA-213ENST00000493627 OPTNQ96CV9 577 aa11.4□□□□□ -0.58
NFIA-213ENST00000493627 ELP3Q9H9T3 547 aa11.4□□□□□ -0.58
NFIA-213ENST00000493627 SUGT1Q9Y2Z0 365 aa11.4□□□□□ -0.58
NFIA-213ENST00000493627 TNRC18O15417 2968 aaPredicted RBP11.39□□□□□ -0.59
NFIA-213ENST00000493627 HTTP42858 3142 aa11.39□□□□□ -0.59
NFIA-213ENST00000493627 CACNB3P54284 484 aa11.39□□□□□ -0.59
NFIA-213ENST00000493627 VGLL4Q14135 290 aa11.39□□□□□ -0.59
NFIA-213ENST00000493627 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.39□□□□□ -0.59
NFIA-213ENST00000493627 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.39□□□□□ -0.59
NFIA-213ENST00000493627 ZDHHC15Q96MV8 337 aa11.39□□□□□ -0.59
NFIA-213ENST00000493627 TMOD2Q9NZR1 351 aa11.39□□□□□ -0.59
NFIA-213ENST00000493627 TESPA1A2RU30 521 aaPredicted RBP11.38□□□□□ -0.59
NFIA-213ENST00000493627 CRHR2Q13324 411 aa11.38□□□□□ -0.59
NFIA-213ENST00000493627 OTUD7BQ6GQQ9 843 aa11.38□□□□□ -0.59
NFIA-213ENST00000493627 APOBEC3HQ6NTF7 200 aaKnown RBP11.38□□□□□ -0.59
NFIA-213ENST00000493627 ATG9AQ7Z3C6 839 aa11.38□□□□□ -0.59
NFIA-213ENST00000493627 API5Q9BZZ5 524 aaKnown RBP11.38□□□□□ -0.59
NFIA-213ENST00000493627 SIL1Q9H173 461 aa11.38□□□□□ -0.59
NFIA-213ENST00000493627 FBXO3Q9UK99 471 aa11.38□□□□□ -0.59
NFIA-213ENST00000493627 NOB1Q9ULX3 412 aaKnown RBP11.38□□□□□ -0.59
NFIA-213ENST00000493627 TRIM17Q9Y577 477 aa11.38□□□□□ -0.59
NFIA-213ENST00000493627 RPAP1Q9BWH6 1393 aaPredicted RBP11.38□□□□□ -0.59
NFIA-213ENST00000493627 CIAO1O76071 339 aa11.37□□□□□ -0.59
NFIA-213ENST00000493627 MAP3K9P80192 1104 aa11.37□□□□□ -0.59
NFIA-213ENST00000493627 ATP2B3Q16720 1220 aa11.37□□□□□ -0.59
NFIA-213ENST00000493627 FKBP1CQ5VVH2 108 aa11.37□□□□□ -0.59
NFIA-213ENST00000493627 HHIPL2Q6UWX4 724 aa11.37□□□□□ -0.59
NFIA-213ENST00000493627 FAM83AQ86UY5 434 aa11.37□□□□□ -0.59
NFIA-213ENST00000493627 WDR66Q8TBY9 1149 aa11.37□□□□□ -0.59
NFIA-213ENST00000493627 MS4A4AQ96JQ5 239 aa11.37□□□□□ -0.59
NFIA-213ENST00000493627 PTPN18Q99952 460 aa11.37□□□□□ -0.59
NFIA-213ENST00000493627 MRIQ9BWK5 157 aa11.37□□□□□ -0.59
NFIA-213ENST00000493627 CSADQ9Y600 493 aa11.37□□□□□ -0.59
NFIA-213ENST00000493627 LRRFIP2Q9Y608 721 aaKnown RBP11.37□□□□□ -0.59
NFIA-213ENST00000493627 CCL15-CCL14A0A0B4J2E2 113 aa11.36□□□□□ -0.59
NFIA-213ENST00000493627 SPDYE5A6NIY4 337 aa11.36□□□□□ -0.59
NFIA-213ENST00000493627 CCER2I3L3R5 266 aa11.36□□□□□ -0.59
NFIA-213ENST00000493627 GTF2A2P52657 109 aa11.36□□□□□ -0.59
NFIA-213ENST00000493627 CCL15Q16663 113 aa11.36□□□□□ -0.59
NFIA-213ENST00000493627 OTOP1Q7RTM1 612 aa11.36□□□□□ -0.59
NFIA-213ENST00000493627 BRI3BPQ8WY22 251 aa11.36□□□□□ -0.59
NFIA-213ENST00000493627 OTUD5Q96G74 571 aa11.36□□□□□ -0.59
NFIA-213ENST00000493627 ERO1AQ96HE7 468 aa11.36□□□□□ -0.59
NFIA-213ENST00000493627 WRNIP1Q96S55 665 aa11.36□□□□□ -0.59
NFIA-213ENST00000493627 MEIS3Q99687 375 aa11.36□□□□□ -0.59
NFIA-213ENST00000493627 RTN4Q9NQC3 1192 aaKnown RBP11.36□□□□□ -0.59
NFIA-213ENST00000493627 MYH13Q9UKX3 1938 aa11.35□□□□□ -0.59
NFIA-213ENST00000493627 PRDX5P30044 214 aa11.35□□□□□ -0.59
NFIA-213ENST00000493627 IL15P40933 162 aaPredicted RBP11.35□□□□□ -0.59
NFIA-213ENST00000493627 RARSP54136 660 aaKnown RBP11.35□□□□□ -0.59
NFIA-213ENST00000493627 DIXDC1Q155Q3 683 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms