RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 USP17L3A6NCW0 530 aa14.27□□□□□ -0.13
CTSA-209ENST00000493522 USP17L4A6NCW7 530 aa14.27□□□□□ -0.13
CTSA-209ENST00000493522 USP17L8P0C7I0 530 aa14.27□□□□□ -0.13
CTSA-209ENST00000493522 ADORA1P30542 326 aa14.27□□□□□ -0.13
CTSA-209ENST00000493522 USP17L1Q7RTZ2 530 aa14.27□□□□□ -0.13
CTSA-209ENST00000493522 FAM84BQ96KN1 310 aaPredicted RBP14.27□□□□□ -0.13
CTSA-209ENST00000493522 NEUROD6Q96NK8 337 aa14.27□□□□□ -0.13
CTSA-209ENST00000493522 MYOZ2Q9NPC6 264 aa14.27□□□□□ -0.13
CTSA-209ENST00000493522 IQSEC3Q9UPP2 1182 aaPredicted RBP14.27□□□□□ -0.13
CTSA-209ENST00000493522 PCDHB15Q9Y5E8 787 aa14.27□□□□□ -0.13
CTSA-209ENST00000493522 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.27□□□□□ -0.13
CTSA-209ENST00000493522 POLR2AP24928 1970 aaKnown RBP14.27□□□□□ -0.13
CTSA-209ENST00000493522 FRAT2O75474 233 aaPredicted RBP14.26□□□□□ -0.13
CTSA-209ENST00000493522 IL1R1P14778 569 aa14.26□□□□□ -0.13
CTSA-209ENST00000493522 AAMPQ13685 434 aa14.26□□□□□ -0.13
CTSA-209ENST00000493522 TNNI3KQ59H18 835 aa14.26□□□□□ -0.13
CTSA-209ENST00000493522 RASAL3Q86YV0 1011 aa14.26□□□□□ -0.13
CTSA-209ENST00000493522 CSRNP1Q96S65 589 aa14.26□□□□□ -0.13
CTSA-209ENST00000493522 BCL11AQ9H165 835 aa14.26□□□□□ -0.13
CTSA-209ENST00000493522 JAG2Q9Y219 1238 aa14.26□□□□□ -0.13
CTSA-209ENST00000493522 FPGT-TNNI3KV9GXZ4 949 aa14.26□□□□□ -0.13
CTSA-209ENST00000493522 COL1A1P02452 1464 aaPredicted RBP14.25□□□□□ -0.13
CTSA-209ENST00000493522 MYH7P12883 1935 aa14.25□□□□□ -0.13
CTSA-209ENST00000493522 MYH2Q9UKX2 1941 aa14.25□□□□□ -0.13
CTSA-209ENST00000493522 PAPPA2Q9BXP8 1791 aa14.25□□□□□ -0.13
CTSA-209ENST00000493522 BCAMP50895 628 aa14.25□□□□□ -0.13
CTSA-209ENST00000493522 GTF2IP78347 998 aa14.25□□□□□ -0.13
CTSA-209ENST00000493522 GORABQ5T7V8 394 aa14.25□□□□□ -0.13
CTSA-209ENST00000493522 FBXO33Q7Z6M2 555 aa14.25□□□□□ -0.13
CTSA-209ENST00000493522 XAGE2Q96GT9 111 aa14.25□□□□□ -0.13
CTSA-209ENST00000493522 GMLQ99445 158 aa14.25□□□□□ -0.13
CTSA-209ENST00000493522 DOCK2Q92608 1830 aa14.25□□□□□ -0.13
CTSA-209ENST00000493522 MYO3BQ8WXR4 1341 aa14.24□□□□□ -0.13
CTSA-209ENST00000493522 RAB11FIP3O75154 756 aa14.24□□□□□ -0.13
CTSA-209ENST00000493522 PHKA1P46020 1223 aa14.24□□□□□ -0.13
CTSA-209ENST00000493522 TIMM10P62072 90 aa14.24□□□□□ -0.13
CTSA-209ENST00000493522 CHAF1AQ13111 956 aaPredicted RBP14.24□□□□□ -0.13
CTSA-209ENST00000493522 DACT2Q5SW24 774 aa14.24□□□□□ -0.13
CTSA-209ENST00000493522 STRIP1Q5VSL9 837 aa14.24□□□□□ -0.13
CTSA-209ENST00000493522 TTLL5Q6EMB2 1281 aa14.24□□□□□ -0.13
CTSA-209ENST00000493522 CTU1Q7Z7A3 348 aaKnown RBP14.24□□□□□ -0.13
CTSA-209ENST00000493522 OGFOD1Q8N543 542 aa14.24□□□□□ -0.13
CTSA-209ENST00000493522 TDRD7Q8NHU6 1098 aaKnown RBP14.24□□□□□ -0.13
CTSA-209ENST00000493522 RHPN1Q8TCX5 695 aa14.24□□□□□ -0.13
CTSA-209ENST00000493522 CNKSR2Q8WXI2 1034 aa14.24□□□□□ -0.13
CTSA-209ENST00000493522 KIF1BPQ96EK5 621 aa14.24□□□□□ -0.13
CTSA-209ENST00000493522 MXD3Q9BW11 206 aa14.24□□□□□ -0.13
CTSA-209ENST00000493522 IL1RAPL2Q9NP60 686 aa14.24□□□□□ -0.13
CTSA-209ENST00000493522 GPR108Q9NPR9 543 aa14.24□□□□□ -0.13
CTSA-209ENST00000493522 GNL3LQ9NVN8 582 aaKnown RBP14.24□□□□□ -0.13
CTSA-209ENST00000493522 PDE4DIPQ5VU43 2346 aa14.23□□□□□ -0.13
CTSA-209ENST00000493522 AACSQ86V21 672 aa14.23□□□□□ -0.13
CTSA-209ENST00000493522 FAM205AQ6ZU69 1335 aa14.22□□□□□ -0.13
CTSA-209ENST00000493522 NF2P35240 595 aa14.22□□□□□ -0.13
CTSA-209ENST00000493522 SOX10P56693 466 aa14.22□□□□□ -0.13
CTSA-209ENST00000493522 CCDC102BQ68D86 513 aa14.22□□□□□ -0.13
CTSA-209ENST00000493522 DBNDD2Q9BQY9 259 aa14.22□□□□□ -0.13
CTSA-209ENST00000493522 AK9Q5TCS8 1911 aa14.21□□□□□ -0.13
CTSA-209ENST00000493522 MMP14P50281 582 aa14.21□□□□□ -0.13
CTSA-209ENST00000493522 TTLL12Q14166 644 aaPredicted RBP14.21□□□□□ -0.13
CTSA-209ENST00000493522 NBPF9Q3BBW0 867 aa14.21□□□□□ -0.13
CTSA-209ENST00000493522 MFSD14BQ5SR56 506 aa14.21□□□□□ -0.13
CTSA-209ENST00000493522 TTC39AQ5SRH9 613 aa14.21□□□□□ -0.13
CTSA-209ENST00000493522 CLASRPQ8N2M8 674 aaKnown RBP14.21□□□□□ -0.13
CTSA-209ENST00000493522 EAF2Q96CJ1 260 aaPredicted RBP14.21□□□□□ -0.13
CTSA-209ENST00000493522 LRRCC1Q9C099 1032 aa14.21□□□□□ -0.13
CTSA-209ENST00000493522 CCDC8Q9H0W5 538 aaPredicted RBP14.21□□□□□ -0.13
CTSA-209ENST00000493522 DCTPP1Q9H773 170 aa14.21□□□□□ -0.13
CTSA-209ENST00000493522 TLR7Q9NYK1 1049 aaKnown RBP14.21□□□□□ -0.13
CTSA-209ENST00000493522 DBNLQ9UJU6 430 aaKnown RBP14.21□□□□□ -0.13
CTSA-209ENST00000493522 F8W031 263 aaPredicted RBP14.2□□□□□ -0.14
CTSA-209ENST00000493522 SEMA3EO15041 775 aa14.2□□□□□ -0.14
CTSA-209ENST00000493522 NEFLP07196 543 aa14.2□□□□□ -0.14
CTSA-209ENST00000493522 PKN2Q16513 984 aaKnown RBP14.2□□□□□ -0.14
CTSA-209ENST00000493522 KIAA0825Q8IV33 1275 aa14.2□□□□□ -0.14
CTSA-209ENST00000493522 CERS5Q8N5B7 392 aa14.2□□□□□ -0.14
CTSA-209ENST00000493522 HDAC9Q9UKV0 1011 aa14.2□□□□□ -0.14
CTSA-209ENST00000493522 DENND2AQ9ULE3 1009 aa14.2□□□□□ -0.14
CTSA-209ENST00000493522 SCAF8Q9UPN6 1271 aaKnown RBP14.2□□□□□ -0.14
CTSA-209ENST00000493522 UBE2Q2LH0YL09 131 aa14.19□□□□□ -0.14
CTSA-209ENST00000493522 WNT10BO00744 389 aa14.19□□□□□ -0.14
CTSA-209ENST00000493522 SMARCA5O60264 1052 aaPredicted RBP14.19□□□□□ -0.14
CTSA-209ENST00000493522 IFIT2P09913 472 aaKnown RBP14.19□□□□□ -0.14
CTSA-209ENST00000493522 FKBP1AP62942 108 aaKnown RBP14.19□□□□□ -0.14
CTSA-209ENST00000493522 HDAC1Q13547 482 aaPredicted RBP14.19□□□□□ -0.14
CTSA-209ENST00000493522 RASGRF1Q13972 1273 aa14.19□□□□□ -0.14
CTSA-209ENST00000493522 CCDC158Q5M9N0 1113 aa14.19□□□□□ -0.14
CTSA-209ENST00000493522 MOB2Q70IA6 237 aa14.19□□□□□ -0.14
CTSA-209ENST00000493522 TBC1D22AQ8WUA7 517 aa14.19□□□□□ -0.14
CTSA-209ENST00000493522 UQCRFS1P1P0C7P4 283 aa14.18□□□□□ -0.14
CTSA-209ENST00000493522 ARID4AP29374 1257 aaPredicted RBP14.18□□□□□ -0.14
CTSA-209ENST00000493522 SREBF2Q12772 1141 aa14.18□□□□□ -0.14
CTSA-209ENST00000493522 PRAMEF18Q5VWM3 479 aa14.18□□□□□ -0.14
CTSA-209ENST00000493522 WDR66Q8TBY9 1149 aa14.18□□□□□ -0.14
CTSA-209ENST00000493522 ZNF296Q8WUU4 475 aaPredicted RBP14.18□□□□□ -0.14
CTSA-209ENST00000493522 RWDD1Q9H446 243 aaPredicted RBP14.18□□□□□ -0.14
CTSA-209ENST00000493522 ZBTB47Q9UFB7 747 aaPredicted RBP14.18□□□□□ -0.14
CTSA-209ENST00000493522 HPS5Q9UPZ3 1129 aa14.18□□□□□ -0.14
CTSA-209ENST00000493522 CDK5RAP2Q96SN8 1893 aa14.18□□□□□ -0.14
CTSA-209ENST00000493522 PDS5AQ29RF7 1337 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms