RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 HIBADHP31937 336 aaKnown RBP17.36■□□□□ 0.37
SAMM50-204ENST00000493161 SP3Q02447 781 aa17.36■□□□□ 0.37
SAMM50-204ENST00000493161 UBE4AQ14139 1066 aa17.36■□□□□ 0.37
SAMM50-204ENST00000493161 INTS3Q68E01 1043 aaKnown RBP17.36■□□□□ 0.37
SAMM50-204ENST00000493161 OTUD7BQ6GQQ9 843 aa17.36■□□□□ 0.37
SAMM50-204ENST00000493161 BRI3BPQ8WY22 251 aa17.36■□□□□ 0.37
SAMM50-204ENST00000493161 C9orf78Q9NZ63 289 aaPredicted RBP17.36■□□□□ 0.37
SAMM50-204ENST00000493161 IQSEC3Q9UPP2 1182 aaPredicted RBP17.36■□□□□ 0.37
SAMM50-204ENST00000493161 BRCA2P51587 3418 aa17.36■□□□□ 0.37
SAMM50-204ENST00000493161 CRKP46108 304 aa17.35■□□□□ 0.37
SAMM50-204ENST00000493161 TNFAIP1Q13829 316 aa17.35■□□□□ 0.37
SAMM50-204ENST00000493161 VGLL4Q14135 290 aa17.35■□□□□ 0.37
SAMM50-204ENST00000493161 SLC4A10Q6U841 1118 aa17.35■□□□□ 0.37
SAMM50-204ENST00000493161 ARMC5Q96C12 935 aa17.35■□□□□ 0.37
SAMM50-204ENST00000493161 MRS2Q9HD23 443 aa17.35■□□□□ 0.37
SAMM50-204ENST00000493161 NBPF7P0C2Y1 421 aaPredicted RBP17.34■□□□□ 0.37
SAMM50-204ENST00000493161 CACNB3P54284 484 aa17.34■□□□□ 0.37
SAMM50-204ENST00000493161 RIPOR2Q9Y4F9 1068 aa17.34■□□□□ 0.37
SAMM50-204ENST00000493161 RBBP6Q7Z6E9 1792 aaKnown RBP17.33■□□□□ 0.37
SAMM50-204ENST00000493161 ARAP2Q8WZ64 1704 aa17.33■□□□□ 0.37
SAMM50-204ENST00000493161 CCL15-CCL14A0A0B4J2E2 113 aa17.33■□□□□ 0.36
SAMM50-204ENST00000493161 ALDH1L1O75891 902 aa17.33■□□□□ 0.36
SAMM50-204ENST00000493161 MAP3K9P80192 1104 aa17.33■□□□□ 0.36
SAMM50-204ENST00000493161 CCL15Q16663 113 aa17.33■□□□□ 0.36
SAMM50-204ENST00000493161 HABP4Q5JVS0 413 aaKnown RBP17.33■□□□□ 0.36
SAMM50-204ENST00000493161 FAM43AQ8N2R8 423 aa17.33■□□□□ 0.36
SAMM50-204ENST00000493161 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.33■□□□□ 0.36
SAMM50-204ENST00000493161 SRCIN1Q9C0H9 1055 aa17.33■□□□□ 0.36
SAMM50-204ENST00000493161 CHAF1AQ13111 956 aaPredicted RBP17.32■□□□□ 0.36
SAMM50-204ENST00000493161 TAF1CQ15572 869 aaPredicted RBP17.32■□□□□ 0.36
SAMM50-204ENST00000493161 LRRC24Q50LG9 513 aa17.32■□□□□ 0.36
SAMM50-204ENST00000493161 FBXO33Q7Z6M2 555 aa17.32■□□□□ 0.36
SAMM50-204ENST00000493161 OTUD5Q96G74 571 aa17.32■□□□□ 0.36
SAMM50-204ENST00000493161 PTCH2Q9Y6C5 1203 aa17.32■□□□□ 0.36
SAMM50-204ENST00000493161 GCC1Q96CN9 775 aa17.31■□□□□ 0.36
SAMM50-204ENST00000493161 MROH5Q6ZUA9 1318 aa17.3■□□□□ 0.36
SAMM50-204ENST00000493161 GTF2A2P52657 109 aa17.3■□□□□ 0.36
SAMM50-204ENST00000493161 ANKRD44Q8N8A2 993 aa17.3■□□□□ 0.36
SAMM50-204ENST00000493161 ZNF333Q96JL9 665 aa17.3■□□□□ 0.36
SAMM50-204ENST00000493161 ARHGAP39Q9C0H5 1083 aa17.3■□□□□ 0.36
SAMM50-204ENST00000493161 BICC1Q9H694 974 aaKnown RBP17.3■□□□□ 0.36
SAMM50-204ENST00000493161 ZFYVE28Q9HCC9 887 aa17.3■□□□□ 0.36
SAMM50-204ENST00000493161 SNCAIPQ9Y6H5 919 aa17.3■□□□□ 0.36
SAMM50-204ENST00000493161 ZSWIM8A7E2V4 1837 aa17.3■□□□□ 0.36
SAMM50-204ENST00000493161 MYCP01106 439 aaPredicted RBP17.29■□□□□ 0.36
SAMM50-204ENST00000493161 TNNI2P48788 182 aa17.29■□□□□ 0.36
SAMM50-204ENST00000493161 VGLL2Q8N8G2 317 aa17.29■□□□□ 0.36
SAMM50-204ENST00000493161 KLHDC4Q8TBB5 520 aa17.29■□□□□ 0.36
SAMM50-204ENST00000493161 ZKSCAN4Q969J2 545 aaPredicted RBP17.29■□□□□ 0.36
SAMM50-204ENST00000493161 CSADQ9Y600 493 aa17.29■□□□□ 0.36
SAMM50-204ENST00000493161 UTYO14607 1347 aa17.28■□□□□ 0.36
SAMM50-204ENST00000493161 SPDYE5A6NIY4 337 aa17.28■□□□□ 0.36
SAMM50-204ENST00000493161 BCAMP50895 628 aa17.28■□□□□ 0.36
SAMM50-204ENST00000493161 VPS37DQ86XT2 251 aa17.28■□□□□ 0.36
SAMM50-204ENST00000493161 KIAA0100Q14667 2235 aaKnown RBP17.28■□□□□ 0.36
SAMM50-204ENST00000493161 BTBD19C9JJ37 291 aa17.27■□□□□ 0.36
SAMM50-204ENST00000493161 ECM2O94769 699 aaPredicted RBP17.27■□□□□ 0.36
SAMM50-204ENST00000493161 RABL6Q3YEC7 729 aaPredicted RBP17.27■□□□□ 0.36
SAMM50-204ENST00000493161 SLC9C1Q4G0N8 1177 aa17.27■□□□□ 0.36
SAMM50-204ENST00000493161 METTL24Q5JXM2 366 aa17.27■□□□□ 0.36
SAMM50-204ENST00000493161 APOBEC3HQ6NTF7 200 aaKnown RBP17.27■□□□□ 0.36
SAMM50-204ENST00000493161 TEKT1Q969V4 418 aa17.27■□□□□ 0.36
SAMM50-204ENST00000493161 TMEM106CQ9BVX2 250 aa17.27■□□□□ 0.36
SAMM50-204ENST00000493161 IRF6O14896 467 aa17.26■□□□□ 0.35
SAMM50-204ENST00000493161 FRAT2O75474 233 aaPredicted RBP17.26■□□□□ 0.35
SAMM50-204ENST00000493161 PDE8BO95263 885 aa17.26■□□□□ 0.35
SAMM50-204ENST00000493161 HDLBPQ00341 1268 aaKnown RBP17.26■□□□□ 0.35
SAMM50-204ENST00000493161 SH3TC2Q8TF17 1288 aa17.26■□□□□ 0.35
SAMM50-204ENST00000493161 ZDHHC15Q96MV8 337 aa17.26■□□□□ 0.35
SAMM50-204ENST00000493161 WRNIP1Q96S55 665 aa17.26■□□□□ 0.35
SAMM50-204ENST00000493161 TLR2O60603 784 aa17.25■□□□□ 0.35
SAMM50-204ENST00000493161 CETPP11597 493 aa17.25■□□□□ 0.35
SAMM50-204ENST00000493161 CAVIN4Q5BKX8 364 aa17.25■□□□□ 0.35
SAMM50-204ENST00000493161 MIGA2Q7L4E1 593 aa17.25■□□□□ 0.35
SAMM50-204ENST00000493161 ERO1BQ86YB8 467 aa17.25■□□□□ 0.35
SAMM50-204ENST00000493161 TBC1D22AQ8WUA7 517 aa17.25■□□□□ 0.35
SAMM50-204ENST00000493161 CTGFP29279 349 aa17.24■□□□□ 0.35
SAMM50-204ENST00000493161 LACTBP83111 547 aaPredicted RBP17.24■□□□□ 0.35
SAMM50-204ENST00000493161 SLC4A8Q2Y0W8 1093 aa17.24■□□□□ 0.35
SAMM50-204ENST00000493161 FGFR2P21802 821 aa17.23■□□□□ 0.35
SAMM50-204ENST00000493161 INPP5BP32019 993 aa17.23■□□□□ 0.35
SAMM50-204ENST00000493161 FXR1P51114 621 aaKnown RBP eCLIP17.23■□□□□ 0.35
SAMM50-204ENST00000493161 SNAPC2Q13487 334 aa17.23■□□□□ 0.35
SAMM50-204ENST00000493161 ARHGEF6Q15052 776 aa17.23■□□□□ 0.35
SAMM50-204ENST00000493161 NBPF11Q86T75 865 aa17.23■□□□□ 0.35
SAMM50-204ENST00000493161 FAM83AQ86UY5 434 aa17.23■□□□□ 0.35
SAMM50-204ENST00000493161 FAM9BQ8IZU0 186 aa17.23■□□□□ 0.35
SAMM50-204ENST00000493161 MRPL50Q8N5N7 158 aaKnown RBP17.23■□□□□ 0.35
SAMM50-204ENST00000493161 MRIQ9BWK5 157 aa17.23■□□□□ 0.35
SAMM50-204ENST00000493161 PPIL2Q13356 520 aa17.22■□□□□ 0.35
SAMM50-204ENST00000493161 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.22■□□□□ 0.35
SAMM50-204ENST00000493161 TMOD2Q9NZR1 351 aa17.22■□□□□ 0.35
SAMM50-204ENST00000493161 COLQQ9Y215 455 aaPredicted RBP17.22■□□□□ 0.35
SAMM50-204ENST00000493161 ANP32CO43423 234 aa17.21■□□□□ 0.35
SAMM50-204ENST00000493161 FKBP1CQ5VVH2 108 aa17.21■□□□□ 0.35
SAMM50-204ENST00000493161 HHIPL2Q6UWX4 724 aa17.21■□□□□ 0.35
SAMM50-204ENST00000493161 USP44Q9H0E7 712 aa17.21■□□□□ 0.35
SAMM50-204ENST00000493161 CPA4Q9UI42 421 aa17.21■□□□□ 0.35
SAMM50-204ENST00000493161 RFX5P48382 616 aaPredicted RBP17.2■□□□□ 0.34
SAMM50-204ENST00000493161 MTFR1Q15390 333 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms