RNA–Protein interactions for RNA: ENST00000491734.6

EXD3-212, Transcript of exonuclease 3'-5' domain containing 3, humanhuman

TSL 1 (best)

Gene EXD3, Length 2,176 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3-212ENST00000491734 RTL9Q8NET4 1388 aa21.17■□□□□ 0.98
EXD3-212ENST00000491734 VPS37CA5D8V6 355 aaPredicted RBP21.16■□□□□ 0.98
EXD3-212ENST00000491734 IDH1O75874 414 aaKnown RBP21.16■□□□□ 0.98
EXD3-212ENST00000491734 SLC5A1P13866 664 aa21.16■□□□□ 0.98
EXD3-212ENST00000491734 IGHMBP2P38935 993 aaKnown RBP21.16■□□□□ 0.98
EXD3-212ENST00000491734 HAND2P61296 217 aa21.16■□□□□ 0.98
EXD3-212ENST00000491734 MAP3K11Q16584 847 aa21.16■□□□□ 0.98
EXD3-212ENST00000491734 FEZ1Q99689 392 aa21.16■□□□□ 0.98
EXD3-212ENST00000491734 NARFQ9UHQ1 456 aa21.16■□□□□ 0.98
EXD3-212ENST00000491734 COL24A1Q17RW2 1714 aa21.16■□□□□ 0.98
EXD3-212ENST00000491734 GPAA1O43292 621 aa21.16■□□□□ 0.98
EXD3-212ENST00000491734 UQCRFS1P1P0C7P4 283 aa21.16■□□□□ 0.98
EXD3-212ENST00000491734 KRT85P78386 507 aa21.16■□□□□ 0.98
EXD3-212ENST00000491734 EXOSC10Q01780 885 aaKnown RBP21.16■□□□□ 0.98
EXD3-212ENST00000491734 TBC1D9BQ66K14 1250 aa21.16■□□□□ 0.98
EXD3-212ENST00000491734 RBM43Q6ZSC3 357 aaKnown RBP21.16■□□□□ 0.98
EXD3-212ENST00000491734 CHST3Q7LGC8 479 aa21.16■□□□□ 0.98
EXD3-212ENST00000491734 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.16■□□□□ 0.98
EXD3-212ENST00000491734 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.16■□□□□ 0.98
EXD3-212ENST00000491734 SRP68Q9UHB9 627 aaKnown RBP21.16■□□□□ 0.98
EXD3-212ENST00000491734 COL4A1P02462 1669 aa21.16■□□□□ 0.98
EXD3-212ENST00000491734 FGAP02671 866 aa21.15■□□□□ 0.98
EXD3-212ENST00000491734 HMGB1P09429 215 aaKnown RBP21.15■□□□□ 0.98
EXD3-212ENST00000491734 FGD1P98174 961 aa21.15■□□□□ 0.98
EXD3-212ENST00000491734 LARP1BQ659C4 914 aaKnown RBP21.15■□□□□ 0.98
EXD3-212ENST00000491734 GTF3C6Q969F1 213 aa21.15■□□□□ 0.98
EXD3-212ENST00000491734 MRVI1Q9Y6F6 885 aa21.15■□□□□ 0.98
EXD3-212ENST00000491734 C4AP0C0L4 1744 aa21.15■□□□□ 0.98
EXD3-212ENST00000491734 GNPATO15228 680 aa21.14■□□□□ 0.98
EXD3-212ENST00000491734 JAK2O60674 1132 aa21.14■□□□□ 0.98
EXD3-212ENST00000491734 CBX1P83916 185 aa21.14■□□□□ 0.98
EXD3-212ENST00000491734 TTF1Q15361 905 aaPredicted RBP21.14■□□□□ 0.98
EXD3-212ENST00000491734 NUP62CLQ9H1M0 184 aa21.14■□□□□ 0.98
EXD3-212ENST00000491734 WWC3Q9ULE0 1092 aa21.14■□□□□ 0.98
EXD3-212ENST00000491734 PDCP20941 246 aa21.14■□□□□ 0.97
EXD3-212ENST00000491734 PLCB2Q00722 1185 aa21.14■□□□□ 0.97
EXD3-212ENST00000491734 TYRO3Q06418 890 aa21.14■□□□□ 0.97
EXD3-212ENST00000491734 ARAP2Q8WZ64 1704 aa21.14■□□□□ 0.97
EXD3-212ENST00000491734 CHRNDQ07001 517 aa21.13■□□□□ 0.97
EXD3-212ENST00000491734 APOBRQ0VD83 1088 aa21.13■□□□□ 0.97
EXD3-212ENST00000491734 RASGRF1Q13972 1273 aa21.13■□□□□ 0.97
EXD3-212ENST00000491734 ZNF772Q68DY9 489 aaPredicted RBP21.13■□□□□ 0.97
EXD3-212ENST00000491734 TTC6Q86TZ1 520 aa21.13■□□□□ 0.97
EXD3-212ENST00000491734 AMIGO3Q86WK7 504 aa21.13■□□□□ 0.97
EXD3-212ENST00000491734 SPATA5Q8NB90 893 aa21.13■□□□□ 0.97
EXD3-212ENST00000491734 RTCBQ9Y3I0 505 aaKnown RBP21.13■□□□□ 0.97
EXD3-212ENST00000491734 ZNF532Q9HCE3 1301 aa21.13■□□□□ 0.97
EXD3-212ENST00000491734 AKAP11Q9UKA4 1901 aa21.13■□□□□ 0.97
EXD3-212ENST00000491734 BCAMP50895 628 aa21.13■□□□□ 0.97
EXD3-212ENST00000491734 ZSCAN25Q6NSZ9 544 aa21.13■□□□□ 0.97
EXD3-212ENST00000491734 CDC37L1Q7L3B6 337 aa21.13■□□□□ 0.97
EXD3-212ENST00000491734 CTNNA3Q9UI47 895 aa21.13■□□□□ 0.97
EXD3-212ENST00000491734 PDE6AP16499 860 aa21.12■□□□□ 0.97
EXD3-212ENST00000491734 SCRN1Q12765 414 aa21.12■□□□□ 0.97
EXD3-212ENST00000491734 WTIPA6NIX2 430 aaPredicted RBP21.12■□□□□ 0.97
EXD3-212ENST00000491734 TPRNQ4KMQ1 711 aa21.12■□□□□ 0.97
EXD3-212ENST00000491734 SPC24Q8NBT2 197 aa21.12■□□□□ 0.97
EXD3-212ENST00000491734 SCAND2PQ9GZW5 306 aaPredicted RBP21.12■□□□□ 0.97
EXD3-212ENST00000491734 DDX19AQ9NUU7 478 aaKnown RBP21.12■□□□□ 0.97
EXD3-212ENST00000491734 TCRBV5S4A2TA0A5A2 114 aa21.11■□□□□ 0.97
EXD3-212ENST00000491734 SMTNL1A8MU46 457 aa21.11■□□□□ 0.97
EXD3-212ENST00000491734 IMMTQ16891 758 aaKnown RBP21.11■□□□□ 0.97
EXD3-212ENST00000491734 FAM196AQ6ZSG2 479 aa21.11■□□□□ 0.97
EXD3-212ENST00000491734 PLA2G4DQ86XP0 818 aa21.11■□□□□ 0.97
EXD3-212ENST00000491734 EP400Q96L91 3159 aa21.1■□□□□ 0.97
EXD3-212ENST00000491734 PTGS1P23219 599 aa21.1■□□□□ 0.97
EXD3-212ENST00000491734 UBE3CQ15386 1083 aa21.1■□□□□ 0.97
EXD3-212ENST00000491734 KRT27Q7Z3Y8 459 aa21.1■□□□□ 0.97
EXD3-212ENST00000491734 FERMT3Q86UX7 667 aa21.1■□□□□ 0.97
EXD3-212ENST00000491734 TDRD7Q8NHU6 1098 aaKnown RBP21.1■□□□□ 0.97
EXD3-212ENST00000491734 AGXT2Q9BYV1 514 aa21.1■□□□□ 0.97
EXD3-212ENST00000491734 GPHNQ9NQX3 736 aaPredicted RBP21.1■□□□□ 0.97
EXD3-212ENST00000491734 CAVIN2O95810 425 aa21.1■□□□□ 0.97
EXD3-212ENST00000491734 CCDC24Q8N4L8 307 aa21.1■□□□□ 0.97
EXD3-212ENST00000491734 LRRC4BQ9NT99 713 aa21.1■□□□□ 0.97
EXD3-212ENST00000491734 PFKFB2O60825 505 aa21.09■□□□□ 0.97
EXD3-212ENST00000491734 GTF2E1P29083 439 aaPredicted RBP21.09■□□□□ 0.97
EXD3-212ENST00000491734 SF3B3Q15393 1217 aaKnown RBP21.09■□□□□ 0.97
EXD3-212ENST00000491734 ARHGEF1Q92888 912 aaKnown RBP21.09■□□□□ 0.97
EXD3-212ENST00000491734 DDX11Q96FC9 970 aa21.09■□□□□ 0.97
EXD3-212ENST00000491734 CDC5LQ99459 802 aaKnown RBP21.09■□□□□ 0.97
EXD3-212ENST00000491734 ZHX1Q9UKY1 873 aaPredicted RBP21.09■□□□□ 0.97
EXD3-212ENST00000491734 UBR3Q6ZT12 1888 aa21.09■□□□□ 0.97
EXD3-212ENST00000491734 ZPR1O75312 459 aa21.09■□□□□ 0.97
EXD3-212ENST00000491734 LIG1P18858 919 aa21.09■□□□□ 0.97
EXD3-212ENST00000491734 SLC10A5Q5PT55 438 aa21.09■□□□□ 0.97
EXD3-212ENST00000491734 FAM173BQ6P4H8 233 aa21.09■□□□□ 0.97
EXD3-212ENST00000491734 ANKRD18AQ8IVF6 992 aa21.09■□□□□ 0.97
EXD3-212ENST00000491734 CBX8Q9HC52 389 aa21.09■□□□□ 0.97
EXD3-212ENST00000491734 PAXBP1Q9Y5B6 917 aa21.09■□□□□ 0.97
EXD3-212ENST00000491734 CCT2P78371 535 aaKnown RBP21.08■□□□□ 0.97
EXD3-212ENST00000491734 TNMDQ9H2S6 317 aa21.08■□□□□ 0.97
EXD3-212ENST00000491734 NAP1L2Q9ULW6 460 aaPredicted RBP21.08■□□□□ 0.97
EXD3-212ENST00000491734 LAMA4Q16363 1823 aa21.08■□□□□ 0.96
EXD3-212ENST00000491734 ZNF213O14771 459 aa21.07■□□□□ 0.96
EXD3-212ENST00000491734 CDC25BP30305 580 aa21.07■□□□□ 0.96
EXD3-212ENST00000491734 ZNF75DP51815 510 aa21.07■□□□□ 0.96
EXD3-212ENST00000491734 NCBP1Q09161 790 aaKnown RBP21.07■□□□□ 0.96
EXD3-212ENST00000491734 MAGEB6Q8N7X4 407 aa21.07■□□□□ 0.96
EXD3-212ENST00000491734 NBPF3Q9H094 633 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms