RNA–Protein interactions for RNA: ENST00000490692.1

PCSK9-202, Transcript of proprotein convertase subtilisin/kexin type 9, humanhuman

TSL 2

Gene PCSK9, Length 3,891 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9-202ENST00000490692 TMEM232C9JQI7 657 aa13.11□□□□□ -0.31
PCSK9-202ENST00000490692 N4BP1O75113 896 aaKnown RBP13.11□□□□□ -0.31
PCSK9-202ENST00000490692 ATP2B2Q01814 1243 aa13.11□□□□□ -0.31
PCSK9-202ENST00000490692 ZNF530Q6P9A1 599 aaPredicted RBP13.11□□□□□ -0.31
PCSK9-202ENST00000490692 MPRIPQ6WCQ1 1025 aa13.11□□□□□ -0.31
PCSK9-202ENST00000490692 PI4K2BQ8TCG2 481 aa13.11□□□□□ -0.31
PCSK9-202ENST00000490692 SSH3Q8TE77 659 aa13.11□□□□□ -0.31
PCSK9-202ENST00000490692 GEMIN8Q9NWZ8 242 aaKnown RBP13.11□□□□□ -0.31
PCSK9-202ENST00000490692 CLIC4Q9Y696 253 aa13.11□□□□□ -0.31
PCSK9-202ENST00000490692 PHLPP2Q6ZVD8 1323 aa13.11□□□□□ -0.31
PCSK9-202ENST00000490692 KIF24Q5T7B8 1368 aa13.11□□□□□ -0.31
PCSK9-202ENST00000490692 AKR1B15C9JRZ8 316 aaPredicted RBP13.11□□□□□ -0.31
PCSK9-202ENST00000490692 HMGB1P09429 215 aaKnown RBP13.11□□□□□ -0.31
PCSK9-202ENST00000490692 PSME1Q06323 249 aa13.11□□□□□ -0.31
PCSK9-202ENST00000490692 NAA25Q14CX7 972 aa13.11□□□□□ -0.31
PCSK9-202ENST00000490692 DHX40Q8IX18 779 aaKnown RBP13.11□□□□□ -0.31
PCSK9-202ENST00000490692 IGSF22Q8N9C0 903 aa13.11□□□□□ -0.31
PCSK9-202ENST00000490692 NCAPGQ9BPX3 1015 aa13.11□□□□□ -0.31
PCSK9-202ENST00000490692 SETBP1Q9Y6X0 1596 aa13.11□□□□□ -0.31
PCSK9-202ENST00000490692 CCDC151A5D8V7 595 aa13.11□□□□□ -0.31
PCSK9-202ENST00000490692 PIP4K2BP78356 416 aa13.11□□□□□ -0.31
PCSK9-202ENST00000490692 SCRN1Q12765 414 aa13.11□□□□□ -0.31
PCSK9-202ENST00000490692 RESTQ13127 1097 aa13.11□□□□□ -0.31
PCSK9-202ENST00000490692 DHX32Q7L7V1 743 aaKnown RBP13.11□□□□□ -0.31
PCSK9-202ENST00000490692 PUS7Q96PZ0 661 aaKnown RBP13.11□□□□□ -0.31
PCSK9-202ENST00000490692 RNF40O75150 1001 aa13.1□□□□□ -0.31
PCSK9-202ENST00000490692 ZNF589Q86UQ0 364 aaPredicted RBP13.1□□□□□ -0.31
PCSK9-202ENST00000490692 PSMB7Q99436 277 aa13.1□□□□□ -0.31
PCSK9-202ENST00000490692 TBC1D8O95759 1140 aa13.1□□□□□ -0.31
PCSK9-202ENST00000490692 PFKFB1P16118 471 aa13.1□□□□□ -0.31
PCSK9-202ENST00000490692 STIM1Q13586 685 aa13.1□□□□□ -0.31
PCSK9-202ENST00000490692 PPP2R5AQ15172 486 aa13.1□□□□□ -0.31
PCSK9-202ENST00000490692 FOXR1Q6PIV2 292 aa13.1□□□□□ -0.31
PCSK9-202ENST00000490692 ALG1Q9BT22 464 aa13.1□□□□□ -0.31
PCSK9-202ENST00000490692 ATP8B1O43520 1251 aa13.1□□□□□ -0.31
PCSK9-202ENST00000490692 NEBLO76041 1014 aa13.1□□□□□ -0.31
PCSK9-202ENST00000490692 PSEN1P49768 467 aa13.1□□□□□ -0.31
PCSK9-202ENST00000490692 SLF1Q9BQI6 1058 aa13.1□□□□□ -0.31
PCSK9-202ENST00000490692 GJB4Q9NTQ9 266 aa13.1□□□□□ -0.31
PCSK9-202ENST00000490692 AOX1Q06278 1338 aa13.1□□□□□ -0.31
PCSK9-202ENST00000490692 TNRQ92752 1358 aa13.1□□□□□ -0.31
PCSK9-202ENST00000490692 ATP1A2P50993 1020 aa13.09□□□□□ -0.31
PCSK9-202ENST00000490692 CASP8Q14790 479 aa13.09□□□□□ -0.31
PCSK9-202ENST00000490692 IMMTQ16891 758 aaKnown RBP13.09□□□□□ -0.31
PCSK9-202ENST00000490692 NAPGQ99747 312 aaPredicted RBP13.09□□□□□ -0.31
PCSK9-202ENST00000490692 ECM2O94769 699 aaPredicted RBP13.09□□□□□ -0.31
PCSK9-202ENST00000490692 TOGARAM2Q6ZUX3 1019 aa13.09□□□□□ -0.31
PCSK9-202ENST00000490692 MAATS1Q7Z4T9 603 aa13.09□□□□□ -0.31
PCSK9-202ENST00000490692 SRGAP1Q7Z6B7 1085 aa13.09□□□□□ -0.31
PCSK9-202ENST00000490692 MTMR7Q9Y216 660 aa13.09□□□□□ -0.31
PCSK9-202ENST00000490692 MYO5BQ9ULV0 1848 aa13.09□□□□□ -0.31
PCSK9-202ENST00000490692 SASH3O75995 380 aa13.09□□□□□ -0.31
PCSK9-202ENST00000490692 LTKP29376 864 aa13.09□□□□□ -0.31
PCSK9-202ENST00000490692 MCMDC2Q4G0Z9 681 aa13.09□□□□□ -0.31
PCSK9-202ENST00000490692 ANO1Q5XXA6 986 aa13.09□□□□□ -0.31
PCSK9-202ENST00000490692 SPECC1LQ69YQ0 1117 aa13.09□□□□□ -0.31
PCSK9-202ENST00000490692 CCDC114Q96M63 670 aa13.09□□□□□ -0.31
PCSK9-202ENST00000490692 BRMS1Q9HCU9 246 aa13.09□□□□□ -0.31
PCSK9-202ENST00000490692 TAF6LQ9Y6J9 622 aa13.09□□□□□ -0.31
PCSK9-202ENST00000490692 ENC1O14682 589 aa13.08□□□□□ -0.32
PCSK9-202ENST00000490692 COBLO75128 1261 aa13.08□□□□□ -0.32
PCSK9-202ENST00000490692 PIP4K2AP48426 406 aaPredicted RBP13.08□□□□□ -0.32
PCSK9-202ENST00000490692 HSPA2P54652 639 aa13.08□□□□□ -0.32
PCSK9-202ENST00000490692 GNGT1P63211 74 aa13.08□□□□□ -0.32
PCSK9-202ENST00000490692 ENOX2Q16206 610 aaKnown RBP13.08□□□□□ -0.32
PCSK9-202ENST00000490692 ADALQ6DHV7 355 aa13.08□□□□□ -0.32
PCSK9-202ENST00000490692 MCTP2Q6DN12 878 aa13.08□□□□□ -0.32
PCSK9-202ENST00000490692 EAF2Q96CJ1 260 aaPredicted RBP13.08□□□□□ -0.32
PCSK9-202ENST00000490692 MYD88Q99836 296 aa13.08□□□□□ -0.32
PCSK9-202ENST00000490692 TLR7Q9NYK1 1049 aaKnown RBP13.08□□□□□ -0.32
PCSK9-202ENST00000490692 ABTB2Q8N961 1025 aa13.08□□□□□ -0.32
PCSK9-202ENST00000490692 DPF2Q92785 391 aa13.08□□□□□ -0.32
PCSK9-202ENST00000490692 MAP4K1Q92918 833 aa13.08□□□□□ -0.32
PCSK9-202ENST00000490692 CLIC6Q96NY7 704 aa13.08□□□□□ -0.32
PCSK9-202ENST00000490692 MAGEC2Q9UBF1 373 aaPredicted RBP13.08□□□□□ -0.32
PCSK9-202ENST00000490692 MCM3P25205 808 aa13.08□□□□□ -0.32
PCSK9-202ENST00000490692 PDE6BP35913 854 aa13.08□□□□□ -0.32
PCSK9-202ENST00000490692 NECTIN1Q15223 517 aa13.08□□□□□ -0.32
PCSK9-202ENST00000490692 MMS22LQ6ZRQ5 1243 aa13.08□□□□□ -0.32
PCSK9-202ENST00000490692 TADA2BQ86TJ2 420 aa13.08□□□□□ -0.32
PCSK9-202ENST00000490692 SLC35F6Q8N357 371 aa13.08□□□□□ -0.32
PCSK9-202ENST00000490692 CDC5LQ99459 802 aaKnown RBP13.08□□□□□ -0.32
PCSK9-202ENST00000490692 VPS16Q9H269 839 aa13.08□□□□□ -0.32
PCSK9-202ENST00000490692 RCOR1Q9UKL0 485 aa13.08□□□□□ -0.32
PCSK9-202ENST00000490692 ATP10DQ9P241 1426 aa13.07□□□□□ -0.32
PCSK9-202ENST00000490692 SOWAHDA6NJG2 315 aa13.07□□□□□ -0.32
PCSK9-202ENST00000490692 YEATS4O95619 227 aa13.07□□□□□ -0.32
PCSK9-202ENST00000490692 ARID4AP29374 1257 aaPredicted RBP13.07□□□□□ -0.32
PCSK9-202ENST00000490692 MUM1L1Q5H9M0 696 aa13.07□□□□□ -0.32
PCSK9-202ENST00000490692 MICALCLQ6ZW33 695 aa13.07□□□□□ -0.32
PCSK9-202ENST00000490692 SND1Q7KZF4 910 aaKnown RBP eCLIP13.07□□□□□ -0.325e-10■■■■■ 30.3
PCSK9-202ENST00000490692 RPAINQ86UA6 219 aa13.07□□□□□ -0.32
PCSK9-202ENST00000490692 EFCAB13Q8IY85 973 aa13.07□□□□□ -0.32
PCSK9-202ENST00000490692 AMOTL2Q9Y2J4 779 aa13.07□□□□□ -0.32
PCSK9-202ENST00000490692 GOLGA6BA6NDN3 693 aa13.07□□□□□ -0.32
PCSK9-202ENST00000490692 ATP5J2-PTCD1G3V325 749 aa13.07□□□□□ -0.32
PCSK9-202ENST00000490692 H3BQF6 201 aa13.07□□□□□ -0.32
PCSK9-202ENST00000490692 PTCD1O75127 700 aaKnown RBP13.07□□□□□ -0.32
PCSK9-202ENST00000490692 CLSTN1O94985 981 aa13.07□□□□□ -0.32
PCSK9-202ENST00000490692 MRPS25P82663 173 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms