RNA–Protein interactions for RNA: ENST00000489870.1

CCT3-213, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 827 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-213ENST00000489870 ANKRD13AQ8IZ07 590 aa11.94□□□□□ -0.5
CCT3-213ENST00000489870 ANKRD44Q8N8A2 993 aa11.94□□□□□ -0.5
CCT3-213ENST00000489870 VGLL2Q8N8G2 317 aa11.94□□□□□ -0.5
CCT3-213ENST00000489870 TSKSQ9UJT2 592 aa11.94□□□□□ -0.5
CCT3-213ENST00000489870 ANGEL1Q9UNK9 670 aaKnown RBP11.94□□□□□ -0.5
CCT3-213ENST00000489870 TTF2Q9UNY4 1162 aaKnown RBP11.94□□□□□ -0.5
CCT3-213ENST00000489870 PDE4DIPQ5VU43 2346 aa11.94□□□□□ -0.5
CCT3-213ENST00000489870 SNAP23O00161 211 aa11.93□□□□□ -0.5
CCT3-213ENST00000489870 EYA2O00167 538 aa11.93□□□□□ -0.5
CCT3-213ENST00000489870 RASA3Q14644 834 aa11.93□□□□□ -0.5
CCT3-213ENST00000489870 PUM3Q15397 648 aaKnown RBP11.93□□□□□ -0.5
CCT3-213ENST00000489870 METTL24Q5JXM2 366 aa11.93□□□□□ -0.5
CCT3-213ENST00000489870 FAM83AQ86UY5 434 aa11.93□□□□□ -0.5
CCT3-213ENST00000489870 DZIP1LQ8IYY4 767 aaKnown RBP11.93□□□□□ -0.5
CCT3-213ENST00000489870 WDR66Q8TBY9 1149 aa11.93□□□□□ -0.5
CCT3-213ENST00000489870 LPIN2Q92539 896 aa11.93□□□□□ -0.5
CCT3-213ENST00000489870 TESPA1A2RU30 521 aaPredicted RBP11.92□□□□□ -0.5
CCT3-213ENST00000489870 GPR25O00155 361 aa11.92□□□□□ -0.5
CCT3-213ENST00000489870 SEMA3EO15041 775 aa11.92□□□□□ -0.5
CCT3-213ENST00000489870 IPO8O15397 1037 aaKnown RBP11.92□□□□□ -0.5
CCT3-213ENST00000489870 FRAT2O75474 233 aaPredicted RBP11.92□□□□□ -0.5
CCT3-213ENST00000489870 USP2O75604 605 aaPredicted RBP11.92□□□□□ -0.5
CCT3-213ENST00000489870 FGFR2P21802 821 aa11.92□□□□□ -0.5
CCT3-213ENST00000489870 GYG1P46976 350 aa11.92□□□□□ -0.5
CCT3-213ENST00000489870 RBM5P52756 815 aaKnown RBP eCLIP11.92□□□□□ -0.5
CCT3-213ENST00000489870 ARHGEF6Q15052 776 aa11.92□□□□□ -0.5
CCT3-213ENST00000489870 PRAMEF18Q5VWM3 479 aa11.92□□□□□ -0.5
CCT3-213ENST00000489870 TEKT1Q969V4 418 aa11.92□□□□□ -0.5
CCT3-213ENST00000489870 ZDHHC15Q96MV8 337 aa11.92□□□□□ -0.5
CCT3-213ENST00000489870 PUS3Q9BZE2 481 aaKnown RBP11.92□□□□□ -0.5
CCT3-213ENST00000489870 GNL3LQ9NVN8 582 aaKnown RBP11.92□□□□□ -0.5
CCT3-213ENST00000489870 ZNF70Q9UC06 446 aaPredicted RBP11.92□□□□□ -0.5
CCT3-213ENST00000489870 LAMB1P07942 1786 aa11.92□□□□□ -0.5
CCT3-213ENST00000489870 FKTNO75072 461 aa11.91□□□□□ -0.5
CCT3-213ENST00000489870 UBTFL1P0CB47 393 aaPredicted RBP11.91□□□□□ -0.5
CCT3-213ENST00000489870 CRKP46108 304 aa11.91□□□□□ -0.5
CCT3-213ENST00000489870 MOB2Q70IA6 237 aa11.91□□□□□ -0.5
CCT3-213ENST00000489870 ZCCHC17Q9NP64 241 aaKnown RBP11.91□□□□□ -0.5
CCT3-213ENST00000489870 SMC4Q9NTJ3 1288 aa11.91□□□□□ -0.5
CCT3-213ENST00000489870 IGSF3O75054 1194 aa11.9□□□□□ -0.5
CCT3-213ENST00000489870 WDHD1O75717 1129 aaPredicted RBP11.9□□□□□ -0.5
CCT3-213ENST00000489870 GNAI3P08754 354 aa11.9□□□□□ -0.5
CCT3-213ENST00000489870 SLC5A1P13866 664 aa11.9□□□□□ -0.5
CCT3-213ENST00000489870 IL15P40933 162 aaPredicted RBP11.9□□□□□ -0.5
CCT3-213ENST00000489870 RFX5P48382 616 aaPredicted RBP11.9□□□□□ -0.5
CCT3-213ENST00000489870 LRRC24Q50LG9 513 aa11.9□□□□□ -0.5
CCT3-213ENST00000489870 FBXO46Q6PJ61 603 aaPredicted RBP11.9□□□□□ -0.5
CCT3-213ENST00000489870 CHRDL2Q6WN34 429 aa11.9□□□□□ -0.5
CCT3-213ENST00000489870 IFNL1Q8IU54 200 aa11.9□□□□□ -0.5
CCT3-213ENST00000489870 ZNF296Q8WUU4 475 aaPredicted RBP11.9□□□□□ -0.5
CCT3-213ENST00000489870 WNK4Q96J92 1243 aa11.9□□□□□ -0.5
CCT3-213ENST00000489870 COPRSQ9NQ92 184 aa11.9□□□□□ -0.5
CCT3-213ENST00000489870 TMOD2Q9NZR1 351 aa11.9□□□□□ -0.5
CCT3-213ENST00000489870 CEP126Q9P2H0 1117 aa11.9□□□□□ -0.5
CCT3-213ENST00000489870 F8W031 263 aaPredicted RBP11.89□□□□□ -0.51
CCT3-213ENST00000489870 MAP3K9P80192 1104 aa11.89□□□□□ -0.51
CCT3-213ENST00000489870 NBPF12Q5TAG4 269 aaPredicted RBP11.89□□□□□ -0.51
CCT3-213ENST00000489870 INTS3Q68E01 1043 aaKnown RBP11.89□□□□□ -0.51
CCT3-213ENST00000489870 ZGPATQ8N5A5 531 aaKnown RBP11.89□□□□□ -0.51
CCT3-213ENST00000489870 TEPSINQ96N21 525 aa11.89□□□□□ -0.51
CCT3-213ENST00000489870 VEZTQ9HBM0 779 aa11.89□□□□□ -0.51
CCT3-213ENST00000489870 PDS5AQ29RF7 1337 aaKnown RBP11.88□□□□□ -0.51
CCT3-213ENST00000489870 SALL1Q9NSC2 1324 aa11.88□□□□□ -0.51
CCT3-213ENST00000489870 MAP4K4O95819 1239 aaPredicted RBP11.88□□□□□ -0.51
CCT3-213ENST00000489870 BCAMP50895 628 aa11.88□□□□□ -0.51
CCT3-213ENST00000489870 GTF2A2P52657 109 aa11.88□□□□□ -0.51
CCT3-213ENST00000489870 MTX1Q13505 466 aa11.88□□□□□ -0.51
CCT3-213ENST00000489870 DCAF15Q66K64 600 aa11.88□□□□□ -0.51
CCT3-213ENST00000489870 ATG9AQ7Z3C6 839 aa11.88□□□□□ -0.51
CCT3-213ENST00000489870 SLF2Q8IX21 1173 aa11.88□□□□□ -0.51
CCT3-213ENST00000489870 TDRD3Q9H7E2 651 aaKnown RBP11.88□□□□□ -0.51
CCT3-213ENST00000489870 DENND2AQ9ULE3 1009 aa11.88□□□□□ -0.51
CCT3-213ENST00000489870 AKAP2Q9Y2D5 859 aa11.88□□□□□ -0.51
CCT3-213ENST00000489870 ARAP2Q8WZ64 1704 aa11.87□□□□□ -0.51
CCT3-213ENST00000489870 CLRN2A0PK11 232 aa11.87□□□□□ -0.51
CCT3-213ENST00000489870 TBC1D8O95759 1140 aa11.87□□□□□ -0.51
CCT3-213ENST00000489870 RARSP54136 660 aaKnown RBP11.87□□□□□ -0.51
CCT3-213ENST00000489870 CDCA7LQ96GN5 454 aa11.87□□□□□ -0.51
CCT3-213ENST00000489870 ERO1AQ96HE7 468 aa11.87□□□□□ -0.51
CCT3-213ENST00000489870 NOB1Q9ULX3 412 aaKnown RBP11.87□□□□□ -0.51
CCT3-213ENST00000489870 SCAF8Q9UPN6 1271 aaKnown RBP11.87□□□□□ -0.51
CCT3-213ENST00000489870 CSADQ9Y600 493 aa11.87□□□□□ -0.51
CCT3-213ENST00000489870 RPAP1Q9BWH6 1393 aaPredicted RBP11.87□□□□□ -0.51
CCT3-213ENST00000489870 GNRH1P01148 92 aa11.86□□□□□ -0.51
CCT3-213ENST00000489870 PRKG1Q13976 671 aa11.86□□□□□ -0.51
CCT3-213ENST00000489870 SPTY2D1Q68D10 685 aaPredicted RBP11.86□□□□□ -0.51
CCT3-213ENST00000489870 APOBEC3HQ6NTF7 200 aaKnown RBP11.86□□□□□ -0.51
CCT3-213ENST00000489870 ERO1BQ86YB8 467 aa11.86□□□□□ -0.51
CCT3-213ENST00000489870 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.86□□□□□ -0.51
CCT3-213ENST00000489870 FAM151AQ8WW52 585 aa11.86□□□□□ -0.51
CCT3-213ENST00000489870 FAM163AQ96GL9 167 aaPredicted RBP11.86□□□□□ -0.51
CCT3-213ENST00000489870 ATP2B3Q16720 1220 aa11.85□□□□□ -0.51
CCT3-213ENST00000489870 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.85□□□□□ -0.51
CCT3-213ENST00000489870 MS4A4AQ96JQ5 239 aa11.85□□□□□ -0.51
CCT3-213ENST00000489870 HPS5Q9UPZ3 1129 aa11.85□□□□□ -0.51
CCT3-213ENST00000489870 SSC5DA1L4H1 1573 aa11.84□□□□□ -0.51
CCT3-213ENST00000489870 SPDYE5A6NIY4 337 aa11.84□□□□□ -0.51
CCT3-213ENST00000489870 LDHBP07195 334 aaKnown RBP11.84□□□□□ -0.51
CCT3-213ENST00000489870 CETPP11597 493 aa11.84□□□□□ -0.51
CCT3-213ENST00000489870 SP3Q02447 781 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms