RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 SCAF8Q9UPN6 1271 aaKnown RBP13.06□□□□□ -0.32
SCAMP4-208ENST00000489554 PPP2R3BQ9Y5P8 575 aa13.06□□□□□ -0.32
SCAMP4-208ENST00000489554 PAPPA2Q9BXP8 1791 aa13.06□□□□□ -0.32
SCAMP4-208ENST00000489554 PNMA6EA0A0J9YXQ4 647 aa13.05□□□□□ -0.32
SCAMP4-208ENST00000489554 FAM155AB1AL88 458 aaPredicted RBP13.05□□□□□ -0.32
SCAMP4-208ENST00000489554 SRGAP3O43295 1099 aa13.05□□□□□ -0.32
SCAMP4-208ENST00000489554 HSPA8P11142 646 aaKnown RBP13.05□□□□□ -0.32
SCAMP4-208ENST00000489554 CHAF1AQ13111 956 aaPredicted RBP13.05□□□□□ -0.32
SCAMP4-208ENST00000489554 ATP2B3Q16720 1220 aa13.05□□□□□ -0.32
SCAMP4-208ENST00000489554 TNS4Q8IZW8 715 aa13.05□□□□□ -0.32
SCAMP4-208ENST00000489554 PRMT6Q96LA8 375 aaPredicted RBP13.05□□□□□ -0.32
SCAMP4-208ENST00000489554 IQSEC3Q9UPP2 1182 aaPredicted RBP13.05□□□□□ -0.32
SCAMP4-208ENST00000489554 SUGT1Q9Y2Z0 365 aa13.05□□□□□ -0.32
SCAMP4-208ENST00000489554 SLC10A3P09131 477 aa13.04□□□□□ -0.32
SCAMP4-208ENST00000489554 LBX1P52954 281 aa13.04□□□□□ -0.32
SCAMP4-208ENST00000489554 ATP8B2P98198 1209 aa13.04□□□□□ -0.32
SCAMP4-208ENST00000489554 HDLBPQ00341 1268 aaKnown RBP13.04□□□□□ -0.32
SCAMP4-208ENST00000489554 HDAC1Q13547 482 aaPredicted RBP13.04□□□□□ -0.32
SCAMP4-208ENST00000489554 TTLL12Q14166 644 aaPredicted RBP13.04□□□□□ -0.32
SCAMP4-208ENST00000489554 POLA2Q14181 598 aa13.04□□□□□ -0.32
SCAMP4-208ENST00000489554 PRAMEF18Q5VWM3 479 aa13.04□□□□□ -0.32
SCAMP4-208ENST00000489554 RPAP2Q8IXW5 612 aaPredicted RBP13.04□□□□□ -0.32
SCAMP4-208ENST00000489554 SSH3Q8TE77 659 aa13.04□□□□□ -0.32
SCAMP4-208ENST00000489554 DEFB129Q9H1M3 183 aa13.04□□□□□ -0.32
SCAMP4-208ENST00000489554 GNL3LQ9NVN8 582 aaKnown RBP13.04□□□□□ -0.32
SCAMP4-208ENST00000489554 PA2G4Q9UQ80 394 aaKnown RBP13.04□□□□□ -0.32
SCAMP4-208ENST00000489554 MAST3O60307 1309 aa13.04□□□□□ -0.32
SCAMP4-208ENST00000489554 ARAP2Q8WZ64 1704 aa13.03□□□□□ -0.32
SCAMP4-208ENST00000489554 CLRN2A0PK11 232 aa13.03□□□□□ -0.32
SCAMP4-208ENST00000489554 CRKP46108 304 aa13.03□□□□□ -0.32
SCAMP4-208ENST00000489554 TNFAIP1Q13829 316 aa13.03□□□□□ -0.32
SCAMP4-208ENST00000489554 B4GALNT3Q6L9W6 998 aa13.03□□□□□ -0.32
SCAMP4-208ENST00000489554 ARMC9Q7Z3E5 817 aa13.03□□□□□ -0.32
SCAMP4-208ENST00000489554 REM2Q8IYK8 340 aaPredicted RBP13.03□□□□□ -0.32
SCAMP4-208ENST00000489554 WDR66Q8TBY9 1149 aa13.03□□□□□ -0.32
SCAMP4-208ENST00000489554 VEZTQ9HBM0 779 aa13.03□□□□□ -0.32
SCAMP4-208ENST00000489554 PCDHAC2Q9Y5I4 1007 aa13.03□□□□□ -0.32
SCAMP4-208ENST00000489554 UBE2Q2LH0YL09 131 aa13.02□□□□□ -0.33
SCAMP4-208ENST00000489554 ZBTB22O15209 634 aa13.02□□□□□ -0.33
SCAMP4-208ENST00000489554 KIF23Q02241 960 aaPredicted RBP13.02□□□□□ -0.33
SCAMP4-208ENST00000489554 SUPT20HL1Q3ZLR7 823 aa13.02□□□□□ -0.33
SCAMP4-208ENST00000489554 SPDYE2Q495Y8 402 aa13.02□□□□□ -0.33
SCAMP4-208ENST00000489554 RASAL3Q86YV0 1011 aa13.02□□□□□ -0.33
SCAMP4-208ENST00000489554 TEKT1Q969V4 418 aa13.02□□□□□ -0.33
SCAMP4-208ENST00000489554 MRIQ9BWK5 157 aa13.02□□□□□ -0.33
SCAMP4-208ENST00000489554 AKAP2Q9Y2D5 859 aa13.02□□□□□ -0.33
SCAMP4-208ENST00000489554 SEMA3EO15041 775 aa13.01□□□□□ -0.33
SCAMP4-208ENST00000489554 GRIK5Q16478 980 aa13.01□□□□□ -0.33
SCAMP4-208ENST00000489554 MOB2Q70IA6 237 aa13.01□□□□□ -0.33
SCAMP4-208ENST00000489554 ZIC5Q96T25 663 aa13.01□□□□□ -0.33
SCAMP4-208ENST00000489554 ZNF70Q9UC06 446 aaPredicted RBP13.01□□□□□ -0.33
SCAMP4-208ENST00000489554 ECM29Q5VYK3 1845 aa13□□□□□ -0.33
SCAMP4-208ENST00000489554 AOX1Q06278 1338 aa13□□□□□ -0.33
SCAMP4-208ENST00000489554 PPP1R12BO60237 982 aaPredicted RBP13□□□□□ -0.33
SCAMP4-208ENST00000489554 TNNI2P48788 182 aa13□□□□□ -0.33
SCAMP4-208ENST00000489554 RASA3Q14644 834 aa13□□□□□ -0.33
SCAMP4-208ENST00000489554 ZDHHC15Q96MV8 337 aa13□□□□□ -0.33
SCAMP4-208ENST00000489554 TDRD3Q9H7E2 651 aaKnown RBP13□□□□□ -0.33
SCAMP4-208ENST00000489554 SAGE1Q9NXZ1 904 aa13□□□□□ -0.33
SCAMP4-208ENST00000489554 DENND2AQ9ULE3 1009 aa13□□□□□ -0.33
SCAMP4-208ENST00000489554 SALL1Q9NSC2 1324 aa12.99□□□□□ -0.33
SCAMP4-208ENST00000489554 UNCXA6NJT0 531 aa12.99□□□□□ -0.33
SCAMP4-208ENST00000489554 PHKA1P46020 1223 aa12.99□□□□□ -0.33
SCAMP4-208ENST00000489554 TFCP2Q12800 502 aa12.99□□□□□ -0.33
SCAMP4-208ENST00000489554 G3BP1Q13283 466 aaKnown RBP eCLIP12.99□□□□□ -0.33
SCAMP4-208ENST00000489554 PRKG1Q13976 671 aa12.99□□□□□ -0.33
SCAMP4-208ENST00000489554 MAP3K11Q16584 847 aa12.99□□□□□ -0.33
SCAMP4-208ENST00000489554 LDLRAD1Q5T700 205 aa12.99□□□□□ -0.33
SCAMP4-208ENST00000489554 CCDC102BQ68D86 513 aa12.99□□□□□ -0.33
SCAMP4-208ENST00000489554 HHIPL2Q6UWX4 724 aa12.99□□□□□ -0.33
SCAMP4-208ENST00000489554 SMC5Q8IY18 1101 aa12.99□□□□□ -0.33
SCAMP4-208ENST00000489554 CCDC136Q96JN2 1154 aa12.99□□□□□ -0.33
SCAMP4-208ENST00000489554 DCTPP1Q9H773 170 aa12.99□□□□□ -0.33
SCAMP4-208ENST00000489554 ANGEL1Q9UNK9 670 aaKnown RBP12.99□□□□□ -0.33
SCAMP4-208ENST00000489554 PDS5AQ29RF7 1337 aaKnown RBP12.98□□□□□ -0.33
SCAMP4-208ENST00000489554 A0A1B0GUL7 405 aa12.98□□□□□ -0.33
SCAMP4-208ENST00000489554 ADORA1P30542 326 aa12.98□□□□□ -0.33
SCAMP4-208ENST00000489554 TIMM10P62072 90 aa12.98□□□□□ -0.33
SCAMP4-208ENST00000489554 NBPF12Q5TAG4 269 aaPredicted RBP12.98□□□□□ -0.33
SCAMP4-208ENST00000489554 ZGPATQ8N5A5 531 aaKnown RBP12.98□□□□□ -0.33
SCAMP4-208ENST00000489554 CSRNP1Q96S65 589 aa12.98□□□□□ -0.33
SCAMP4-208ENST00000489554 TMOD2Q9NZR1 351 aa12.98□□□□□ -0.33
SCAMP4-208ENST00000489554 TSKSQ9UJT2 592 aa12.98□□□□□ -0.33
SCAMP4-208ENST00000489554 NOP58Q9Y2X3 529 aaKnown RBP12.98□□□□□ -0.33
SCAMP4-208ENST00000489554 SSC5DA1L4H1 1573 aa12.98□□□□□ -0.33
SCAMP4-208ENST00000489554 TCP10L2B9ZVM9 353 aa12.97□□□□□ -0.33
SCAMP4-208ENST00000489554 LDHBP07195 334 aaKnown RBP12.97□□□□□ -0.33
SCAMP4-208ENST00000489554 IREB2P48200 963 aaKnown RBP12.97□□□□□ -0.33
SCAMP4-208ENST00000489554 FKBP1CQ5VVH2 108 aa12.97□□□□□ -0.33
SCAMP4-208ENST00000489554 APOBEC3HQ6NTF7 200 aaKnown RBP12.97□□□□□ -0.33
SCAMP4-208ENST00000489554 XAGE2Q96GT9 111 aa12.97□□□□□ -0.33
SCAMP4-208ENST00000489554 RWDD1Q9H446 243 aaPredicted RBP12.97□□□□□ -0.33
SCAMP4-208ENST00000489554 PRDX5P30044 214 aa12.96□□□□□ -0.33
SCAMP4-208ENST00000489554 SREBF2Q12772 1141 aa12.96□□□□□ -0.33
SCAMP4-208ENST00000489554 CENPQQ7L2Z9 268 aaPredicted RBP12.96□□□□□ -0.33
SCAMP4-208ENST00000489554 SLC10A4Q96EP9 437 aa12.96□□□□□ -0.33
SCAMP4-208ENST00000489554 NEUROD6Q96NK8 337 aa12.96□□□□□ -0.33
SCAMP4-208ENST00000489554 RNF186Q9NXI6 227 aa12.96□□□□□ -0.33
SCAMP4-208ENST00000489554 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.96□□□□□ -0.33
SCAMP4-208ENST00000489554 HMMRO75330 724 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms