RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 SPDYE2Q495Y8 402 aa31.02■■■□□ 2.56
HMGN1-217ENST00000489072 RASAL3Q86YV0 1011 aa31.02■■■□□ 2.56
HMGN1-217ENST00000489072 TDRD3Q9H7E2 651 aaKnown RBP31.02■■■□□ 2.56
HMGN1-217ENST00000489072 ZNF70Q9UC06 446 aaPredicted RBP31.02■■■□□ 2.56
HMGN1-217ENST00000489072 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP31.02■■■□□ 2.56
HMGN1-217ENST00000489072 PHKA1P46020 1223 aa31.01■■■□□ 2.55
HMGN1-217ENST00000489072 ITPRIPQ8IWB1 547 aa31.01■■■□□ 2.55
HMGN1-217ENST00000489072 PPP2R3BQ9Y5P8 575 aa31.01■■■□□ 2.55
HMGN1-217ENST00000489072 HDLBPQ00341 1268 aaKnown RBP31■■■□□ 2.55
HMGN1-217ENST00000489072 KIF23Q02241 960 aaPredicted RBP31■■■□□ 2.55
HMGN1-217ENST00000489072 PRKG1Q13976 671 aa31■■■□□ 2.55
HMGN1-217ENST00000489072 TNS4Q8IZW8 715 aa31■■■□□ 2.55
HMGN1-217ENST00000489072 C1orf115Q9H7X2 142 aa31■■■□□ 2.55
HMGN1-217ENST00000489072 TIMM10P62072 90 aa30.99■■■□□ 2.55
HMGN1-217ENST00000489072 WDR66Q8TBY9 1149 aa30.99■■■□□ 2.55
HMGN1-217ENST00000489072 TSKSQ9UJT2 592 aa30.99■■■□□ 2.55
HMGN1-217ENST00000489072 FZD1Q9UP38 647 aa30.99■■■□□ 2.55
HMGN1-217ENST00000489072 SUGT1Q9Y2Z0 365 aa30.99■■■□□ 2.55
HMGN1-217ENST00000489072 ZBTB7BO15156 539 aaPredicted RBP30.98■■■□□ 2.55
HMGN1-217ENST00000489072 GNL3LQ9NVN8 582 aaKnown RBP30.98■■■□□ 2.55
HMGN1-217ENST00000489072 POLA2Q14181 598 aa30.97■■■□□ 2.55
HMGN1-217ENST00000489072 RASA3Q14644 834 aa30.97■■■□□ 2.55
HMGN1-217ENST00000489072 CCDC102BQ68D86 513 aa30.97■■■□□ 2.55
HMGN1-217ENST00000489072 TEKT1Q969V4 418 aa30.97■■■□□ 2.55
HMGN1-217ENST00000489072 A0A1B0GUL7 405 aa30.96■■■□□ 2.55
HMGN1-217ENST00000489072 NBPF12Q5TAG4 269 aaPredicted RBP30.96■■■□□ 2.55
HMGN1-217ENST00000489072 ARMC9Q7Z3E5 817 aa30.96■■■□□ 2.55
HMGN1-217ENST00000489072 PANK1Q8TE04 598 aa30.96■■■□□ 2.55
HMGN1-217ENST00000489072 MRIQ9BWK5 157 aa30.96■■■□□ 2.55
HMGN1-217ENST00000489072 ATP8B2P98198 1209 aa30.95■■■□□ 2.55
HMGN1-217ENST00000489072 ANGEL1Q9UNK9 670 aaKnown RBP30.95■■■□□ 2.55
HMGN1-217ENST00000489072 AKAP2Q9Y2D5 859 aa30.95■■■□□ 2.55
HMGN1-217ENST00000489072 MAST3O60307 1309 aa30.95■■■□□ 2.54
HMGN1-217ENST00000489072 AKAP11Q9UKA4 1901 aa30.94■■■□□ 2.54
HMGN1-217ENST00000489072 SEMA3EO15041 775 aa30.94■■■□□ 2.54
HMGN1-217ENST00000489072 CA12O43570 354 aa30.94■■■□□ 2.54
HMGN1-217ENST00000489072 LDLRAD1Q5T700 205 aa30.94■■■□□ 2.54
HMGN1-217ENST00000489072 SSH3Q8TE77 659 aa30.94■■■□□ 2.54
HMGN1-217ENST00000489072 XAGE2Q96GT9 111 aa30.94■■■□□ 2.54
HMGN1-217ENST00000489072 ZDHHC15Q96MV8 337 aa30.94■■■□□ 2.54
HMGN1-217ENST00000489072 DENND2AQ9ULE3 1009 aa30.94■■■□□ 2.54
HMGN1-217ENST00000489072 TCP10L2B9ZVM9 353 aa30.93■■■□□ 2.54
HMGN1-217ENST00000489072 ZBTB22O15209 634 aa30.93■■■□□ 2.54
HMGN1-217ENST00000489072 G3BP1Q13283 466 aaKnown RBP eCLIP30.93■■■□□ 2.54
HMGN1-217ENST00000489072 TNFAIP1Q13829 316 aa30.93■■■□□ 2.54
HMGN1-217ENST00000489072 APOBEC3HQ6NTF7 200 aaKnown RBP30.93■■■□□ 2.54
HMGN1-217ENST00000489072 CSRNP1Q96S65 589 aa30.93■■■□□ 2.54
HMGN1-217ENST00000489072 PRDX5P30044 214 aa30.92■■■□□ 2.54
HMGN1-217ENST00000489072 MAP3K11Q16584 847 aa30.92■■■□□ 2.54
HMGN1-217ENST00000489072 SUPT20HL1Q3ZLR7 823 aa30.92■■■□□ 2.54
HMGN1-217ENST00000489072 HHIPL2Q6UWX4 724 aa30.92■■■□□ 2.54
HMGN1-217ENST00000489072 CDAN1Q8IWY9 1227 aa30.92■■■□□ 2.54
HMGN1-217ENST00000489072 SALL1Q9NSC2 1324 aa30.92■■■□□ 2.54
HMGN1-217ENST00000489072 CACNB3P54284 484 aa30.91■■■□□ 2.54
HMGN1-217ENST00000489072 RASGRF1Q13972 1273 aa30.91■■■□□ 2.54
HMGN1-217ENST00000489072 TEPSINQ96N21 525 aa30.91■■■□□ 2.54
HMGN1-217ENST00000489072 NEUROD6Q96NK8 337 aa30.9■■■□□ 2.54
HMGN1-217ENST00000489072 CASP8AP2Q9UKL3 1982 aa30.9■■■□□ 2.54
HMGN1-217ENST00000489072 PPP1R12BO60237 982 aaPredicted RBP30.89■■■□□ 2.54
HMGN1-217ENST00000489072 DIXDC1Q155Q3 683 aa30.89■■■□□ 2.54
HMGN1-217ENST00000489072 TMEM39BQ9GZU3 492 aa30.89■■■□□ 2.54
HMGN1-217ENST00000489072 LDHBP07195 334 aaKnown RBP30.88■■■□□ 2.53
HMGN1-217ENST00000489072 MVPQ14764 893 aaKnown RBP30.88■■■□□ 2.53
HMGN1-217ENST00000489072 RCAN3Q9UKA8 241 aa30.88■■■□□ 2.53
HMGN1-217ENST00000489072 OTOFQ9HC10 1997 aa30.88■■■□□ 2.53
HMGN1-217ENST00000489072 USP2O75604 605 aaPredicted RBP30.87■■■□□ 2.53
HMGN1-217ENST00000489072 CLMNQ96JQ2 1002 aa30.87■■■□□ 2.53
HMGN1-217ENST00000489072 RNF186Q9NXI6 227 aa30.87■■■□□ 2.53
HMGN1-217ENST00000489072 DAGLAQ9Y4D2 1042 aa30.87■■■□□ 2.53
HMGN1-217ENST00000489072 PDS5AQ29RF7 1337 aaKnown RBP30.87■■■□□ 2.53
HMGN1-217ENST00000489072 MYH2Q9UKX2 1941 aa30.86■■■□□ 2.53
HMGN1-217ENST00000489072 TNNI2P48788 182 aa30.86■■■□□ 2.53
HMGN1-217ENST00000489072 MKRN3Q13064 507 aaKnown RBP30.86■■■□□ 2.53
HMGN1-217ENST00000489072 SURF6O75683 361 aaKnown RBP30.85■■■□□ 2.53
HMGN1-217ENST00000489072 CEP85Q6P2H3 762 aa30.85■■■□□ 2.53
HMGN1-217ENST00000489072 SAGE1Q9NXZ1 904 aa30.85■■■□□ 2.53
HMGN1-217ENST00000489072 TRPA1O75762 1119 aa30.84■■■□□ 2.53
HMGN1-217ENST00000489072 MS4A1P11836 297 aa30.84■■■□□ 2.53
HMGN1-217ENST00000489072 REM2Q8IYK8 340 aaPredicted RBP30.84■■■□□ 2.53
HMGN1-217ENST00000489072 TMOD2Q9NZR1 351 aa30.84■■■□□ 2.53
HMGN1-217ENST00000489072 NOP58Q9Y2X3 529 aaKnown RBP30.84■■■□□ 2.53
HMGN1-217ENST00000489072 IREB2P48200 963 aaKnown RBP30.83■■■□□ 2.53
HMGN1-217ENST00000489072 OS9Q13438 667 aaPredicted RBP30.83■■■□□ 2.53
HMGN1-217ENST00000489072 FKBP1CQ5VVH2 108 aa30.83■■■□□ 2.53
HMGN1-217ENST00000489072 SPRYD7Q5W111 196 aa30.83■■■□□ 2.53
HMGN1-217ENST00000489072 ZBTB4Q9P1Z0 1013 aaPredicted RBP30.83■■■□□ 2.53
HMGN1-217ENST00000489072 GORABQ5T7V8 394 aa30.82■■■□□ 2.52
HMGN1-217ENST00000489072 FAM83AQ86UY5 434 aa30.82■■■□□ 2.52
HMGN1-217ENST00000489072 ZGPATQ8N5A5 531 aaKnown RBP30.82■■■□□ 2.52
HMGN1-217ENST00000489072 SLC10A4Q96EP9 437 aa30.82■■■□□ 2.52
HMGN1-217ENST00000489072 GPR108Q9NPR9 543 aa30.82■■■□□ 2.52
HMGN1-217ENST00000489072 HMG20BQ9P0W2 317 aa30.82■■■□□ 2.52
HMGN1-217ENST00000489072 ARID4AP29374 1257 aaPredicted RBP30.81■■■□□ 2.52
HMGN1-217ENST00000489072 TNNI3KQ59H18 835 aa30.81■■■□□ 2.52
HMGN1-217ENST00000489072 CDC42EP5Q6NZY7 148 aa30.81■■■□□ 2.52
HMGN1-217ENST00000489072 PI16Q6UXB8 463 aa30.81■■■□□ 2.52
HMGN1-217ENST00000489072 ABCF2Q9UG63 623 aa30.81■■■□□ 2.52
HMGN1-217ENST00000489072 FPGT-TNNI3KV9GXZ4 949 aa30.81■■■□□ 2.52
HMGN1-217ENST00000489072 LAMB1P07942 1786 aa30.8■■■□□ 2.52
HMGN1-217ENST00000489072 UNCXA6NJT0 531 aa30.8■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms