RNA–Protein interactions for RNA: ENST00000486790.2

RCC1-212, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 5

Gene RCC1, Length 481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-212ENST00000486790 MAST3O60307 1309 aa33.23■■■□□ 2.91
RCC1-212ENST00000486790 USP2O75604 605 aaPredicted RBP33.22■■■□□ 2.91
RCC1-212ENST00000486790 CHAF1AQ13111 956 aaPredicted RBP33.22■■■□□ 2.91
RCC1-212ENST00000486790 SSH1Q8WYL5 1049 aa33.22■■■□□ 2.91
RCC1-212ENST00000486790 TEKT1Q969V4 418 aa33.22■■■□□ 2.91
RCC1-212ENST00000486790 HDAC5Q9UQL6 1122 aa33.22■■■□□ 2.91
RCC1-212ENST00000486790 SUGT1Q9Y2Z0 365 aa33.22■■■□□ 2.91
RCC1-212ENST00000486790 KIF16BQ96L93 1317 aa33.22■■■□□ 2.91
RCC1-212ENST00000486790 PDE4DIPQ5VU43 2346 aa33.21■■■□□ 2.91
RCC1-212ENST00000486790 PUM3Q15397 648 aaKnown RBP33.21■■■□□ 2.91
RCC1-212ENST00000486790 LRRC24Q50LG9 513 aa33.21■■■□□ 2.91
RCC1-212ENST00000486790 ANKRD44Q8N8A2 993 aa33.21■■■□□ 2.91
RCC1-212ENST00000486790 HOOK2Q96ED9 719 aa33.21■■■□□ 2.91
RCC1-212ENST00000486790 LAMB1P07942 1786 aa33.19■■■□□ 2.9
RCC1-212ENST00000486790 SLFN5Q08AF3 891 aa33.19■■■□□ 2.9
RCC1-212ENST00000486790 MRIQ9BWK5 157 aa33.19■■■□□ 2.9
RCC1-212ENST00000486790 TCP10L2B9ZVM9 353 aa33.18■■■□□ 2.9
RCC1-212ENST00000486790 ERO1AQ96HE7 468 aa33.18■■■□□ 2.9
RCC1-212ENST00000486790 USP44Q9H0E7 712 aa33.18■■■□□ 2.9
RCC1-212ENST00000486790 IQSEC3Q9UPP2 1182 aaPredicted RBP33.18■■■□□ 2.9
RCC1-212ENST00000486790 CSADQ9Y600 493 aa33.18■■■□□ 2.9
RCC1-212ENST00000486790 VGLL2Q8N8G2 317 aa33.17■■■□□ 2.9
RCC1-212ENST00000486790 SMC4Q9NTJ3 1288 aa33.17■■■□□ 2.9
RCC1-212ENST00000486790 SLC5A1P13866 664 aa33.16■■■□□ 2.9
RCC1-212ENST00000486790 WDHD1O75717 1129 aaPredicted RBP33.15■■■□□ 2.9
RCC1-212ENST00000486790 CT47B1P0C2W7 299 aaPredicted RBP33.15■■■□□ 2.9
RCC1-212ENST00000486790 AOX1Q06278 1338 aa33.15■■■□□ 2.9
RCC1-212ENST00000486790 OPTNQ96CV9 577 aa33.15■■■□□ 2.9
RCC1-212ENST00000486790 IGF2BP3O00425 579 aaKnown RBP eCLIP33.14■■■□□ 2.9
RCC1-212ENST00000486790 MAP3K9P80192 1104 aa33.14■■■□□ 2.9
RCC1-212ENST00000486790 ZDHHC15Q96MV8 337 aa33.14■■■□□ 2.9
RCC1-212ENST00000486790 ELP3Q9H9T3 547 aa33.14■■■□□ 2.9
RCC1-212ENST00000486790 EYA2O00167 538 aa33.13■■■□□ 2.89
RCC1-212ENST00000486790 BCAMP50895 628 aa33.13■■■□□ 2.89
RCC1-212ENST00000486790 ARHGEF6Q15052 776 aa33.13■■■□□ 2.89
RCC1-212ENST00000486790 WDR66Q8TBY9 1149 aa33.13■■■□□ 2.89
RCC1-212ENST00000486790 LPIN2Q92539 896 aa33.13■■■□□ 2.89
RCC1-212ENST00000486790 TMEM39BQ9GZU3 492 aa33.13■■■□□ 2.89
RCC1-212ENST00000486790 R3HDMLQ9H3Y0 253 aa33.13■■■□□ 2.89
RCC1-212ENST00000486790 FBXO3Q9UK99 471 aa33.13■■■□□ 2.89
RCC1-212ENST00000486790 TRIM17Q9Y577 477 aa33.13■■■□□ 2.89
RCC1-212ENST00000486790 TNRC18O15417 2968 aaPredicted RBP33.12■■■□□ 2.89
RCC1-212ENST00000486790 TESPA1A2RU30 521 aaPredicted RBP33.12■■■□□ 2.89
RCC1-212ENST00000486790 GTF2A2P52657 109 aa33.12■■■□□ 2.89
RCC1-212ENST00000486790 FKBP1CQ5VVH2 108 aa33.12■■■□□ 2.89
RCC1-212ENST00000486790 KLHDC4Q8TBB5 520 aa33.12■■■□□ 2.89
RCC1-212ENST00000486790 TEPSINQ96N21 525 aa33.12■■■□□ 2.89
RCC1-212ENST00000486790 UBTFL1P0CB47 393 aaPredicted RBP33.11■■■□□ 2.89
RCC1-212ENST00000486790 FAM83AQ86UY5 434 aa33.11■■■□□ 2.89
RCC1-212ENST00000486790 GNL3LQ9NVN8 582 aaKnown RBP33.11■■■□□ 2.89
RCC1-212ENST00000486790 MYH13Q9UKX3 1938 aa33.1■■■□□ 2.89
RCC1-212ENST00000486790 INTS3Q68E01 1043 aaKnown RBP33.1■■■□□ 2.89
RCC1-212ENST00000486790 OTOFQ9HC10 1997 aa33.09■■■□□ 2.89
RCC1-212ENST00000486790 FGFR2P21802 821 aa33.09■■■□□ 2.89
RCC1-212ENST00000486790 CRHR2Q13324 411 aa33.09■■■□□ 2.89
RCC1-212ENST00000486790 HHIPL2Q6UWX4 724 aa33.09■■■□□ 2.89
RCC1-212ENST00000486790 GJA5P36382 358 aa33.08■■■□□ 2.89
RCC1-212ENST00000486790 DCAF15Q66K64 600 aa33.08■■■□□ 2.89
RCC1-212ENST00000486790 DDX55Q8NHQ9 600 aaKnown RBP eCLIP33.08■■■□□ 2.89
RCC1-212ENST00000486790 SP3Q02447 781 aa33.07■■■□□ 2.88
RCC1-212ENST00000486790 VGLL4Q14135 290 aa33.07■■■□□ 2.88
RCC1-212ENST00000486790 PPP1R3FQ6ZSY5 799 aaPredicted RBP33.07■■■□□ 2.88
RCC1-212ENST00000486790 OTOP1Q7RTM1 612 aa33.07■■■□□ 2.88
RCC1-212ENST00000486790 API5Q9BZZ5 524 aaKnown RBP33.07■■■□□ 2.88
RCC1-212ENST00000486790 ZFYVE28Q9HCC9 887 aa33.06■■■□□ 2.88
RCC1-212ENST00000486790 CEP126Q9P2H0 1117 aa33.06■■■□□ 2.88
RCC1-212ENST00000486790 CIAO1O76071 339 aa33.05■■■□□ 2.88
RCC1-212ENST00000486790 SLC34A2O95436 690 aa33.05■■■□□ 2.88
RCC1-212ENST00000486790 GRIK5Q16478 980 aa33.05■■■□□ 2.88
RCC1-212ENST00000486790 EFCC1Q9HA90 598 aa33.05■■■□□ 2.88
RCC1-212ENST00000486790 CCL15-CCL14A0A0B4J2E2 113 aa33.04■■■□□ 2.88
RCC1-212ENST00000486790 CCL15Q16663 113 aa33.04■■■□□ 2.88
RCC1-212ENST00000486790 OTUD5Q96G74 571 aa33.04■■■□□ 2.88
RCC1-212ENST00000486790 RFX5P48382 616 aaPredicted RBP33.03■■■□□ 2.88
RCC1-212ENST00000486790 MS4A4AQ96JQ5 239 aa33.03■■■□□ 2.88
RCC1-212ENST00000486790 PTPN18Q99952 460 aa33.03■■■□□ 2.88
RCC1-212ENST00000486790 RPAP1Q9BWH6 1393 aaPredicted RBP33.02■■■□□ 2.88
RCC1-212ENST00000486790 TAF1CQ15572 869 aaPredicted RBP33.02■■■□□ 2.88
RCC1-212ENST00000486790 APOBEC3HQ6NTF7 200 aaKnown RBP33.02■■■□□ 2.88
RCC1-212ENST00000486790 ERO1BQ86YB8 467 aa33.02■■■□□ 2.88
RCC1-212ENST00000486790 WRNIP1Q96S55 665 aa33.02■■■□□ 2.88
RCC1-212ENST00000486790 CETPP11597 493 aa33.01■■■□□ 2.87
RCC1-212ENST00000486790 CACNB3P54284 484 aa33.01■■■□□ 2.87
RCC1-212ENST00000486790 ATP2B3Q16720 1220 aa33.01■■■□□ 2.87
RCC1-212ENST00000486790 PRPF38BQ5VTL8 546 aaKnown RBP33.01■■■□□ 2.87
RCC1-212ENST00000486790 CDAN1Q8IWY9 1227 aa33.01■■■□□ 2.87
RCC1-212ENST00000486790 CD99L2Q8TCZ2 262 aa33.01■■■□□ 2.87
RCC1-212ENST00000486790 CDCA7LQ96GN5 454 aa33.01■■■□□ 2.87
RCC1-212ENST00000486790 ZCCHC17Q9NP64 241 aaKnown RBP33.01■■■□□ 2.87
RCC1-212ENST00000486790 NOB1Q9ULX3 412 aaKnown RBP33.01■■■□□ 2.87
RCC1-212ENST00000486790 SPDYE5A6NIY4 337 aa33■■■□□ 2.87
RCC1-212ENST00000486790 SEMA3EO15041 775 aa33■■■□□ 2.87
RCC1-212ENST00000486790 IL15P40933 162 aaPredicted RBP33■■■□□ 2.87
RCC1-212ENST00000486790 TRMT2AQ8IZ69 625 aaKnown RBP33■■■□□ 2.87
RCC1-212ENST00000486790 ZGPATQ8N5A5 531 aaKnown RBP33■■■□□ 2.87
RCC1-212ENST00000486790 SIL1Q9H173 461 aa33■■■□□ 2.87
RCC1-212ENST00000486790 PTPN22Q9Y2R2 807 aa33■■■□□ 2.87
RCC1-212ENST00000486790 AK9Q5TCS8 1911 aa32.99■■■□□ 2.87
RCC1-212ENST00000486790 SNAPC2Q13487 334 aa32.99■■■□□ 2.87
RCC1-212ENST00000486790 BRI3BPQ8WY22 251 aa32.99■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms