RNA–Protein interactions for RNA: ENST00000485441.5

SRRM1-213, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-213ENST00000485441 PDZD3Q86UT5 571 aa8.05□□□□□ -1.12
SRRM1-213ENST00000485441 CCDC84Q86UT8 332 aaPredicted RBP8.05□□□□□ -1.12
SRRM1-213ENST00000485441 VPS37DQ86XT2 251 aa8.05□□□□□ -1.12
SRRM1-213ENST00000485441 TRIM42Q8IWZ5 723 aa8.05□□□□□ -1.12
SRRM1-213ENST00000485441 SLC16A10Q8TF71 515 aa8.05□□□□□ -1.12
SRRM1-213ENST00000485441 SEC16BQ96JE7 1060 aa8.05□□□□□ -1.12
SRRM1-213ENST00000485441 BTBD6Q96KE9 485 aa8.05□□□□□ -1.12
SRRM1-213ENST00000485441 SOX17Q9H6I2 414 aaPredicted RBP8.05□□□□□ -1.12
SRRM1-213ENST00000485441 CACNA2D2Q9NY47 1150 aa8.05□□□□□ -1.12
SRRM1-213ENST00000485441 PPP1R1BQ9UD71 204 aaPredicted RBP8.05□□□□□ -1.12
SRRM1-213ENST00000485441 CYP8B1Q9UNU6 501 aa8.05□□□□□ -1.12
SRRM1-213ENST00000485441 SHROOM4Q9ULL8 1493 aa8.05□□□□□ -1.12
SRRM1-213ENST00000485441 FAM221AA4D161 298 aa8.04□□□□□ -1.12
SRRM1-213ENST00000485441 H3BRJ5 948 aa8.04□□□□□ -1.12
SRRM1-213ENST00000485441 OIP5O43482 229 aa8.04□□□□□ -1.12
SRRM1-213ENST00000485441 IKBKEQ14164 716 aa8.04□□□□□ -1.12
SRRM1-213ENST00000485441 KANK3Q6NY19 840 aa8.04□□□□□ -1.12
SRRM1-213ENST00000485441 C8orf86Q6ZUL3 223 aa8.04□□□□□ -1.12
SRRM1-213ENST00000485441 IL22RA1Q8N6P7 574 aa8.04□□□□□ -1.12
SRRM1-213ENST00000485441 GOLM1Q8NBJ4 401 aa8.04□□□□□ -1.12
SRRM1-213ENST00000485441 GRIN3AQ8TCU5 1115 aa8.04□□□□□ -1.12
SRRM1-213ENST00000485441 EDARADDQ8WWZ3 215 aa8.04□□□□□ -1.12
SRRM1-213ENST00000485441 DHX38Q92620 1227 aaKnown RBP8.04□□□□□ -1.12
SRRM1-213ENST00000485441 IRF7Q92985 503 aa8.04□□□□□ -1.12
SRRM1-213ENST00000485441 SPATA32Q96LK8 384 aa8.04□□□□□ -1.12
SRRM1-213ENST00000485441 NRSN2Q9GZP1 204 aa8.04□□□□□ -1.12
SRRM1-213ENST00000485441 PRDM6Q9NQX0 595 aa8.04□□□□□ -1.12
SRRM1-213ENST00000485441 LRRC4BQ9NT99 713 aa8.04□□□□□ -1.12
SRRM1-213ENST00000485441 SUPT16HQ9Y5B9 1047 aaKnown RBP8.04□□□□□ -1.12
SRRM1-213ENST00000485441 ROBO2Q9HCK4 1378 aa8.03□□□□□ -1.12
SRRM1-213ENST00000485441 CRKP46108 304 aa8.03□□□□□ -1.12
SRRM1-213ENST00000485441 FAM196AQ6ZSG2 479 aa8.03□□□□□ -1.12
SRRM1-213ENST00000485441 SLITRK4Q8IW52 837 aa8.03□□□□□ -1.12
SRRM1-213ENST00000485441 SULF2Q8IWU5 870 aa8.03□□□□□ -1.12
SRRM1-213ENST00000485441 GALNT6Q8NCL4 622 aa8.03□□□□□ -1.12
SRRM1-213ENST00000485441 JPH1Q9HDC5 661 aaPredicted RBP8.03□□□□□ -1.12
SRRM1-213ENST00000485441 UBP1Q9NZI7 540 aa8.03□□□□□ -1.12
SRRM1-213ENST00000485441 SHISA8B8ZZ34 492 aa8.02□□□□□ -1.13
SRRM1-213ENST00000485441 F13A1P00488 732 aa8.02□□□□□ -1.13
SRRM1-213ENST00000485441 HOXB4P17483 251 aaPredicted RBP8.02□□□□□ -1.13
SRRM1-213ENST00000485441 SOX9P48436 509 aa8.02□□□□□ -1.13
SRRM1-213ENST00000485441 SCARA3Q6AZY7 606 aa8.02□□□□□ -1.13
SRRM1-213ENST00000485441 MPRIPQ6WCQ1 1025 aa8.02□□□□□ -1.13
SRRM1-213ENST00000485441 BNC2Q6ZN30 1099 aaPredicted RBP8.02□□□□□ -1.13
SRRM1-213ENST00000485441 WNT8BQ93098 351 aa8.02□□□□□ -1.13
SRRM1-213ENST00000485441 LRRC3Q9BY71 257 aa8.02□□□□□ -1.13
SRRM1-213ENST00000485441 GINM1Q9NU53 330 aa8.02□□□□□ -1.13
SRRM1-213ENST00000485441 SAMM50Q9Y512 469 aa8.02□□□□□ -1.13
SRRM1-213ENST00000485441 PPME1Q9Y570 386 aa8.02□□□□□ -1.13
SRRM1-213ENST00000485441 M0R082 166 aa8.01□□□□□ -1.13
SRRM1-213ENST00000485441 PTPN11Q06124 597 aaPredicted RBP8.01□□□□□ -1.13
SRRM1-213ENST00000485441 CHSY3Q70JA7 882 aa8.01□□□□□ -1.13
SRRM1-213ENST00000485441 ZNF417Q8TAU3 575 aa8.01□□□□□ -1.13
SRRM1-213ENST00000485441 GATAD2BQ8WXI9 593 aa8.01□□□□□ -1.13
SRRM1-213ENST00000485441 GAL3ST3Q96A11 431 aa8.01□□□□□ -1.13
SRRM1-213ENST00000485441 ZNF587Q96SQ5 575 aaPredicted RBP8.01□□□□□ -1.13
SRRM1-213ENST00000485441 LINC01387J3KSC0 135 aa8□□□□□ -1.13
SRRM1-213ENST00000485441 LILRB5O75023 590 aa8□□□□□ -1.13
SRRM1-213ENST00000485441 CILPO75339 1184 aa8□□□□□ -1.13
SRRM1-213ENST00000485441 BCRP11274 1271 aa8□□□□□ -1.13
SRRM1-213ENST00000485441 SELPP16109 830 aa8□□□□□ -1.13
SRRM1-213ENST00000485441 NASPP49321 788 aaPredicted RBP8□□□□□ -1.13
SRRM1-213ENST00000485441 CABP4P57796 275 aa8□□□□□ -1.13
SRRM1-213ENST00000485441 PIP4K2BP78356 416 aa8□□□□□ -1.13
SRRM1-213ENST00000485441 COL9A2Q14055 689 aaPredicted RBP8□□□□□ -1.13
SRRM1-213ENST00000485441 LRRC14Q15048 493 aa8□□□□□ -1.13
SRRM1-213ENST00000485441 SNAP47Q5SQN1 464 aa8□□□□□ -1.13
SRRM1-213ENST00000485441 LYPD4Q6UWN0 246 aa8□□□□□ -1.13
SRRM1-213ENST00000485441 FBXO27Q8NI29 283 aa8□□□□□ -1.13
SRRM1-213ENST00000485441 EMILIN2Q9BXX0 1053 aa8□□□□□ -1.13
SRRM1-213ENST00000485441 OSGEPQ9NPF4 335 aa8□□□□□ -1.13
SRRM1-213ENST00000485441 EFR3BQ9Y2G0 817 aa8□□□□□ -1.13
SRRM1-213ENST00000485441 CELA2BP08218 269 aaPredicted RBP7.99□□□□□ -1.13
SRRM1-213ENST00000485441 NID1P14543 1247 aa7.99□□□□□ -1.13
SRRM1-213ENST00000485441 GTF2F1P35269 517 aaKnown RBP eCLIP7.99□□□□□ -1.13
SRRM1-213ENST00000485441 AP3B2Q13367 1082 aa7.99□□□□□ -1.13
SRRM1-213ENST00000485441 MSL1Q68DK7 614 aa7.99□□□□□ -1.13
SRRM1-213ENST00000485441 LLGL2Q6P1M3 1020 aa7.99□□□□□ -1.13
SRRM1-213ENST00000485441 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.99□□□□□ -1.134e-14■□□□□ 10.1
SRRM1-213ENST00000485441 MIR1-1HGQ9H1L0 117 aa7.99□□□□□ -1.13
SRRM1-213ENST00000485441 FSCN2O14926 492 aa7.98□□□□□ -1.13
SRRM1-213ENST00000485441 GSTP1P09211 210 aaKnown RBP7.98□□□□□ -1.13
SRRM1-213ENST00000485441 CDC25BP30305 580 aa7.98□□□□□ -1.13
SRRM1-213ENST00000485441 C19orf57Q0VDD7 668 aa7.98□□□□□ -1.13
SRRM1-213ENST00000485441 SEPT6Q14141 434 aa7.98□□□□□ -1.13
SRRM1-213ENST00000485441 SETDB1Q15047 1291 aa7.98□□□□□ -1.13
SRRM1-213ENST00000485441 TXNDC11Q6PKC3 985 aa7.98□□□□□ -1.13
SRRM1-213ENST00000485441 JARID2Q92833 1246 aaPredicted RBP7.98□□□□□ -1.13
SRRM1-213ENST00000485441 NKD1Q969G9 470 aa7.98□□□□□ -1.13
SRRM1-213ENST00000485441 KLHDC7BQ96G42 594 aa7.98□□□□□ -1.13
SRRM1-213ENST00000485441 DNAJC2Q99543 621 aaKnown RBP7.98□□□□□ -1.13
SRRM1-213ENST00000485441 TRIM37O94972 964 aa7.97□□□□□ -1.13
SRRM1-213ENST00000485441 ECEL1O95672 775 aa7.97□□□□□ -1.13
SRRM1-213ENST00000485441 GMPRP36959 345 aa7.97□□□□□ -1.13
SRRM1-213ENST00000485441 GSTM4Q03013 218 aa7.97□□□□□ -1.13
SRRM1-213ENST00000485441 APOBRQ0VD83 1088 aa7.97□□□□□ -1.13
SRRM1-213ENST00000485441 MPP2Q14168 576 aa7.97□□□□□ -1.13
SRRM1-213ENST00000485441 DPH6Q7L8W6 267 aa7.97□□□□□ -1.13
SRRM1-213ENST00000485441 GALNT11Q8NCW6 608 aa7.97□□□□□ -1.13
SRRM1-213ENST00000485441 DDX54Q8TDD1 881 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 180.9 ms