RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 NLRP12P59046 1061 aa7.02□□□□□ -1.29
VPS13A-211ENST00000484581 XPCQ01831 940 aaPredicted RBP7.02□□□□□ -1.29
VPS13A-211ENST00000484581 EHHADHQ08426 723 aa7.02□□□□□ -1.29
VPS13A-211ENST00000484581 SF3A1Q15459 793 aaKnown RBP7.02□□□□□ -1.29
VPS13A-211ENST00000484581 NAALADL2Q58DX5 795 aa7.02□□□□□ -1.29
VPS13A-211ENST00000484581 ZDHHC13Q8IUH4 622 aa7.02□□□□□ -1.29
VPS13A-211ENST00000484581 TMC1Q8TDI8 760 aa7.02□□□□□ -1.29
VPS13A-211ENST00000484581 FAM83CQ9BQN1 747 aa7.02□□□□□ -1.29
VPS13A-211ENST00000484581 RNF208Q9H0X6 261 aa7.02□□□□□ -1.29
VPS13A-211ENST00000484581 CCDC87Q9NVE4 849 aa7.02□□□□□ -1.29
VPS13A-211ENST00000484581 MZF1P28698 734 aaPredicted RBP7.01□□□□□ -1.29
VPS13A-211ENST00000484581 ERCC5P28715 1186 aaPredicted RBP7.01□□□□□ -1.29
VPS13A-211ENST00000484581 MAPK8P45983 427 aa7.01□□□□□ -1.29
VPS13A-211ENST00000484581 ATP2B2Q01814 1243 aa7.01□□□□□ -1.29
VPS13A-211ENST00000484581 PLCB3Q01970 1234 aa7.01□□□□□ -1.29
VPS13A-211ENST00000484581 AAMPQ13685 434 aa7.01□□□□□ -1.29
VPS13A-211ENST00000484581 FDX2Q6P4F2 183 aa7.01□□□□□ -1.29
VPS13A-211ENST00000484581 FAM20CQ8IXL6 584 aa7.01□□□□□ -1.29
VPS13A-211ENST00000484581 DBNDD2Q9BQY9 259 aa7.01□□□□□ -1.29
VPS13A-211ENST00000484581 RUSC1Q9BVN2 902 aa7.01□□□□□ -1.29
VPS13A-211ENST00000484581 GGNBP2Q9H3C7 697 aa7.01□□□□□ -1.29
VPS13A-211ENST00000484581 DZANK1Q9NVP4 752 aa7.01□□□□□ -1.29
VPS13A-211ENST00000484581 KIAA1324LA8MWY0 1029 aaPredicted RBP7□□□□□ -1.29
VPS13A-211ENST00000484581 PDGFAP04085 211 aa7□□□□□ -1.29
VPS13A-211ENST00000484581 ACPPP15309 386 aa7□□□□□ -1.29
VPS13A-211ENST00000484581 HDLBPQ00341 1268 aaKnown RBP7□□□□□ -1.29
VPS13A-211ENST00000484581 C19orf57Q0VDD7 668 aa7□□□□□ -1.29
VPS13A-211ENST00000484581 LDLRAD1Q5T700 205 aa7□□□□□ -1.29
VPS13A-211ENST00000484581 BEND4Q6ZU67 534 aa7□□□□□ -1.29
VPS13A-211ENST00000484581 TMC4Q7Z404 712 aa7□□□□□ -1.29
VPS13A-211ENST00000484581 MRS2Q9HD23 443 aa7□□□□□ -1.29
VPS13A-211ENST00000484581 PARP2Q9UGN5 583 aa7□□□□□ -1.29
VPS13A-211ENST00000484581 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7□□□□□ -1.29
VPS13A-211ENST00000484581 NFKBIEO00221 500 aa6.99□□□□□ -1.29
VPS13A-211ENST00000484581 GAS2O43903 313 aaKnown RBP6.99□□□□□ -1.29
VPS13A-211ENST00000484581 TRPA1O75762 1119 aa6.99□□□□□ -1.29
VPS13A-211ENST00000484581 GP2P55259 537 aaKnown RBP6.99□□□□□ -1.29
VPS13A-211ENST00000484581 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.99□□□□□ -1.29
VPS13A-211ENST00000484581 GJD3Q8N144 294 aa6.99□□□□□ -1.29
VPS13A-211ENST00000484581 UBXN4Q92575 508 aa6.99□□□□□ -1.29
VPS13A-211ENST00000484581 OSMRQ99650 979 aa6.99□□□□□ -1.29
VPS13A-211ENST00000484581 DUSP9Q99956 384 aaKnown RBP6.99□□□□□ -1.29
VPS13A-211ENST00000484581 HIF3AQ9Y2N7 669 aa6.99□□□□□ -1.29
VPS13A-211ENST00000484581 A6NHS1 94 aa6.98□□□□□ -1.29
VPS13A-211ENST00000484581 SORBS3O60504 671 aa6.98□□□□□ -1.29
VPS13A-211ENST00000484581 USP5P45974 858 aa6.98□□□□□ -1.29
VPS13A-211ENST00000484581 PREPP48147 710 aa6.98□□□□□ -1.29
VPS13A-211ENST00000484581 DAB2P98082 770 aa6.98□□□□□ -1.29
VPS13A-211ENST00000484581 IKBKEQ14164 716 aa6.98□□□□□ -1.29
VPS13A-211ENST00000484581 TMEM102Q8N9M5 508 aaPredicted RBP6.98□□□□□ -1.29
VPS13A-211ENST00000484581 GIMAP7Q8NHV1 300 aa6.98□□□□□ -1.29
VPS13A-211ENST00000484581 SHKBP1Q8TBC3 707 aa6.98□□□□□ -1.29
VPS13A-211ENST00000484581 BSNDQ8WZ55 320 aa6.98□□□□□ -1.29
VPS13A-211ENST00000484581 METTL5Q9NRN9 209 aaKnown RBP6.98□□□□□ -1.29
VPS13A-211ENST00000484581 OAS3Q9Y6K5 1087 aaKnown RBP6.98□□□□□ -1.29
VPS13A-211ENST00000484581 ARID1BQ8NFD5 2236 aaPredicted RBP6.97□□□□□ -1.29
VPS13A-211ENST00000484581 MEGF11A6BM72 1044 aa6.97□□□□□ -1.29
VPS13A-211ENST00000484581 PHACTR2O75167 634 aa6.97□□□□□ -1.29
VPS13A-211ENST00000484581 EDN3P14138 238 aa6.97□□□□□ -1.29
VPS13A-211ENST00000484581 TAL1P17542 331 aaPredicted RBP6.97□□□□□ -1.29
VPS13A-211ENST00000484581 PSMD2Q13200 908 aa6.97□□□□□ -1.29
VPS13A-211ENST00000484581 ENOX2Q16206 610 aaKnown RBP6.97□□□□□ -1.29
VPS13A-211ENST00000484581 NUTM2GQ5VZR2 741 aa6.97□□□□□ -1.29
VPS13A-211ENST00000484581 ALG1LQ6GMV1 187 aa6.97□□□□□ -1.29
VPS13A-211ENST00000484581 C12orf50Q8NA57 414 aaPredicted RBP6.97□□□□□ -1.29
VPS13A-211ENST00000484581 TMEM87AQ8NBN3 555 aa6.97□□□□□ -1.29
VPS13A-211ENST00000484581 NXPE3Q969Y0 559 aa6.97□□□□□ -1.29
VPS13A-211ENST00000484581 HHIPQ96QV1 700 aa6.97□□□□□ -1.29
VPS13A-211ENST00000484581 SOX13Q9UN79 622 aa6.97□□□□□ -1.29
VPS13A-211ENST00000484581 POLIQ9UNA4 740 aa6.97□□□□□ -1.29
VPS13A-211ENST00000484581 PRR19A6NJB7 356 aa6.96□□□□□ -1.3
VPS13A-211ENST00000484581 WDR64B1ANS9 1081 aa6.96□□□□□ -1.3
VPS13A-211ENST00000484581 WNT11O96014 354 aa6.96□□□□□ -1.3
VPS13A-211ENST00000484581 RXRBP28702 533 aa6.96□□□□□ -1.3
VPS13A-211ENST00000484581 RAD51AP2Q09MP3 1159 aa6.96□□□□□ -1.3
VPS13A-211ENST00000484581 FAM161BQ96MY7 647 aa6.96□□□□□ -1.3
VPS13A-211ENST00000484581 CHRDQ9H2X0 955 aa6.96□□□□□ -1.3
VPS13A-211ENST00000484581 VTI1BQ9UEU0 232 aa6.96□□□□□ -1.3
VPS13A-211ENST00000484581 PNMA6FA0A0J9YX94 578 aa6.95□□□□□ -1.3
VPS13A-211ENST00000484581 SOX1O00570 391 aaPredicted RBP6.95□□□□□ -1.3
VPS13A-211ENST00000484581 HMGB1P09429 215 aaKnown RBP6.95□□□□□ -1.3
VPS13A-211ENST00000484581 MAP4P27816 1152 aaKnown RBP6.95□□□□□ -1.3
VPS13A-211ENST00000484581 FANCCQ00597 558 aa6.95□□□□□ -1.3
VPS13A-211ENST00000484581 FZD5Q13467 585 aa6.95□□□□□ -1.3
VPS13A-211ENST00000484581 METTL16Q86W50 562 aaKnown RBP6.95□□□□□ -1.3
VPS13A-211ENST00000484581 DTX1Q86Y01 620 aa6.95□□□□□ -1.3
VPS13A-211ENST00000484581 ASAP3Q8TDY4 903 aa6.95□□□□□ -1.3
VPS13A-211ENST00000484581 FBF1Q8TES7 1133 aa6.95□□□□□ -1.3
VPS13A-211ENST00000484581 USP26Q9BXU7 913 aa6.95□□□□□ -1.3
VPS13A-211ENST00000484581 NIF3L1Q9GZT8 377 aa6.95□□□□□ -1.3
VPS13A-211ENST00000484581 CYP4F12Q9HCS2 524 aa6.95□□□□□ -1.3
VPS13A-211ENST00000484581 ATG3Q9NT62 314 aa6.95□□□□□ -1.3
VPS13A-211ENST00000484581 WWC3Q9ULE0 1092 aa6.95□□□□□ -1.3
VPS13A-211ENST00000484581 RNF114Q9Y508 228 aa6.95□□□□□ -1.3
VPS13A-211ENST00000484581 EREGO14944 169 aa6.94□□□□□ -1.3
VPS13A-211ENST00000484581 TNFRSF21O75509 655 aa6.94□□□□□ -1.3
VPS13A-211ENST00000484581 SPINK2P20155 84 aa6.94□□□□□ -1.3
VPS13A-211ENST00000484581 GNA15P30679 374 aa6.94□□□□□ -1.3
VPS13A-211ENST00000484581 HGSNATQ68CP4 663 aa6.94□□□□□ -1.3
VPS13A-211ENST00000484581 RNF34Q969K3 372 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms