RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 ATG9AQ7Z3C6 839 aa11.78□□□□□ -0.52
NUP50-215ENST00000484186 LPIN2Q92539 896 aa11.78□□□□□ -0.52
NUP50-215ENST00000484186 ARHGAP45Q92619 1136 aa11.78□□□□□ -0.52
NUP50-215ENST00000484186 MRIQ9BWK5 157 aa11.78□□□□□ -0.52
NUP50-215ENST00000484186 USP2O75604 605 aaPredicted RBP11.77□□□□□ -0.53
NUP50-215ENST00000484186 CIAO1O76071 339 aa11.77□□□□□ -0.53
NUP50-215ENST00000484186 TBC1D8O95759 1140 aa11.77□□□□□ -0.53
NUP50-215ENST00000484186 IREB2P48200 963 aaKnown RBP11.77□□□□□ -0.53
NUP50-215ENST00000484186 SUGT1Q9Y2Z0 365 aa11.77□□□□□ -0.53
NUP50-215ENST00000484186 LRRFIP2Q9Y608 721 aaKnown RBP11.77□□□□□ -0.53
NUP50-215ENST00000484186 ECM29Q5VYK3 1845 aa11.76□□□□□ -0.53
NUP50-215ENST00000484186 SSC5DA1L4H1 1573 aa11.76□□□□□ -0.53
NUP50-215ENST00000484186 MANSC4A6NHS7 340 aaPredicted RBP11.76□□□□□ -0.53
NUP50-215ENST00000484186 TCP10L2B9ZVM9 353 aa11.76□□□□□ -0.53
NUP50-215ENST00000484186 TNNI2P48788 182 aa11.76□□□□□ -0.53
NUP50-215ENST00000484186 INHBEP58166 350 aa11.76□□□□□ -0.53
NUP50-215ENST00000484186 INTS3Q68E01 1043 aaKnown RBP11.76□□□□□ -0.53
NUP50-215ENST00000484186 TEKT1Q969V4 418 aa11.76□□□□□ -0.53
NUP50-215ENST00000484186 CLMNQ96JQ2 1002 aa11.76□□□□□ -0.53
NUP50-215ENST00000484186 SIL1Q9H173 461 aa11.76□□□□□ -0.53
NUP50-215ENST00000484186 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.76□□□□□ -0.53
NUP50-215ENST00000484186 CEP126Q9P2H0 1117 aa11.76□□□□□ -0.53
NUP50-215ENST00000484186 IPO8O15397 1037 aaKnown RBP11.75□□□□□ -0.53
NUP50-215ENST00000484186 ZBTB48P10074 688 aaPredicted RBP11.75□□□□□ -0.53
NUP50-215ENST00000484186 IL15P40933 162 aaPredicted RBP11.75□□□□□ -0.53
NUP50-215ENST00000484186 CTU1Q7Z7A3 348 aaKnown RBP11.75□□□□□ -0.53
NUP50-215ENST00000484186 ANKRD13AQ8IZ07 590 aa11.75□□□□□ -0.53
NUP50-215ENST00000484186 WDR66Q8TBY9 1149 aa11.75□□□□□ -0.53
NUP50-215ENST00000484186 WNK4Q96J92 1243 aa11.75□□□□□ -0.53
NUP50-215ENST00000484186 ZDHHC15Q96MV8 337 aa11.75□□□□□ -0.53
NUP50-215ENST00000484186 TEPSINQ96N21 525 aa11.75□□□□□ -0.53
NUP50-215ENST00000484186 MEIS3Q99687 375 aa11.75□□□□□ -0.53
NUP50-215ENST00000484186 CFHR5Q9BXR6 569 aa11.75□□□□□ -0.53
NUP50-215ENST00000484186 PA2G4Q9UQ80 394 aaKnown RBP11.75□□□□□ -0.53
NUP50-215ENST00000484186 GPR25O00155 361 aa11.74□□□□□ -0.53
NUP50-215ENST00000484186 ALDH1A1P00352 501 aa11.74□□□□□ -0.53
NUP50-215ENST00000484186 GNAI3P08754 354 aa11.74□□□□□ -0.53
NUP50-215ENST00000484186 RGS19P49795 217 aa11.74□□□□□ -0.53
NUP50-215ENST00000484186 ATP2B3Q16720 1220 aa11.74□□□□□ -0.53
NUP50-215ENST00000484186 NOM1Q5C9Z4 860 aaKnown RBP11.74□□□□□ -0.53
NUP50-215ENST00000484186 HHIPL2Q6UWX4 724 aa11.74□□□□□ -0.53
NUP50-215ENST00000484186 ZNF296Q8WUU4 475 aaPredicted RBP11.74□□□□□ -0.53
NUP50-215ENST00000484186 TMEM39BQ9GZU3 492 aa11.74□□□□□ -0.53
NUP50-215ENST00000484186 COPRSQ9NQ92 184 aa11.74□□□□□ -0.53
NUP50-215ENST00000484186 GNL3LQ9NVN8 582 aaKnown RBP11.74□□□□□ -0.53
NUP50-215ENST00000484186 MAST3O60307 1309 aa11.74□□□□□ -0.53
NUP50-215ENST00000484186 BCAR3O75815 825 aa11.73□□□□□ -0.53
NUP50-215ENST00000484186 APOBEC3HQ6NTF7 200 aaKnown RBP11.73□□□□□ -0.53
NUP50-215ENST00000484186 IFNL1Q8IU54 200 aa11.73□□□□□ -0.53
NUP50-215ENST00000484186 CDAN1Q8IWY9 1227 aa11.73□□□□□ -0.53
NUP50-215ENST00000484186 ARAP2Q8WZ64 1704 aa11.73□□□□□ -0.53
NUP50-215ENST00000484186 TMOD2Q9NZR1 351 aa11.73□□□□□ -0.53
NUP50-215ENST00000484186 TRIM27P14373 513 aa11.72□□□□□ -0.53
NUP50-215ENST00000484186 GJA5P36382 358 aa11.72□□□□□ -0.53
NUP50-215ENST00000484186 CACNB3P54284 484 aa11.72□□□□□ -0.53
NUP50-215ENST00000484186 MAP3K9P80192 1104 aa11.72□□□□□ -0.53
NUP50-215ENST00000484186 MTX1Q13505 466 aa11.72□□□□□ -0.53
NUP50-215ENST00000484186 PKN2Q16513 984 aaKnown RBP11.72□□□□□ -0.53
NUP50-215ENST00000484186 FKBP1CQ5VVH2 108 aa11.72□□□□□ -0.53
NUP50-215ENST00000484186 ATF7IPQ6VMQ6 1270 aa11.72□□□□□ -0.53
NUP50-215ENST00000484186 FAM83AQ86UY5 434 aa11.72□□□□□ -0.53
NUP50-215ENST00000484186 MIER1Q8N108 512 aa11.72□□□□□ -0.53
NUP50-215ENST00000484186 FRAT1Q92837 279 aaPredicted RBP11.72□□□□□ -0.53
NUP50-215ENST00000484186 R3HDMLQ9H3Y0 253 aa11.72□□□□□ -0.53
NUP50-215ENST00000484186 DENND2AQ9ULE3 1009 aa11.72□□□□□ -0.53
NUP50-215ENST00000484186 IGF2BP3O00425 579 aaKnown RBP eCLIP11.71□□□□□ -0.53
NUP50-215ENST00000484186 SEMA3EO15041 775 aa11.71□□□□□ -0.53
NUP50-215ENST00000484186 ZBTB22O15209 634 aa11.71□□□□□ -0.53
NUP50-215ENST00000484186 SRGAP3O43295 1099 aa11.71□□□□□ -0.53
NUP50-215ENST00000484186 FKTNO75072 461 aa11.71□□□□□ -0.53
NUP50-215ENST00000484186 PHKA1P46020 1223 aa11.71□□□□□ -0.53
NUP50-215ENST00000484186 OTUD7BQ6GQQ9 843 aa11.71□□□□□ -0.53
NUP50-215ENST00000484186 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.71□□□□□ -0.53
NUP50-215ENST00000484186 OPTNQ96CV9 577 aa11.71□□□□□ -0.53
NUP50-215ENST00000484186 HOOK2Q96ED9 719 aa11.71□□□□□ -0.53
NUP50-215ENST00000484186 ELP3Q9H9T3 547 aa11.71□□□□□ -0.53
NUP50-215ENST00000484186 TNNQ9UQP3 1299 aa11.71□□□□□ -0.53
NUP50-215ENST00000484186 SALL1Q9NSC2 1324 aa11.7□□□□□ -0.54
NUP50-215ENST00000484186 TESPA1A2RU30 521 aaPredicted RBP11.7□□□□□ -0.54
NUP50-215ENST00000484186 GNAI2P04899 355 aa11.7□□□□□ -0.54
NUP50-215ENST00000484186 LDHBP07195 334 aaKnown RBP11.7□□□□□ -0.54
NUP50-215ENST00000484186 PRDX5P30044 214 aa11.7□□□□□ -0.54
NUP50-215ENST00000484186 ADORA1P30542 326 aa11.7□□□□□ -0.54
NUP50-215ENST00000484186 TIMM10P62072 90 aa11.7□□□□□ -0.54
NUP50-215ENST00000484186 HNRNPUQ00839 825 aaKnown RBP eCLIP11.7□□□□□ -0.54
NUP50-215ENST00000484186 MLLT1Q03111 559 aaPredicted RBP11.7□□□□□ -0.54
NUP50-215ENST00000484186 VGLL4Q14135 290 aa11.7□□□□□ -0.54
NUP50-215ENST00000484186 DIEXFQ68CQ4 756 aaKnown RBP11.7□□□□□ -0.54
NUP50-215ENST00000484186 CCDC102BQ68D86 513 aa11.7□□□□□ -0.54
NUP50-215ENST00000484186 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.7□□□□□ -0.54
NUP50-215ENST00000484186 CLUAP1Q96AJ1 413 aa11.7□□□□□ -0.54
NUP50-215ENST00000484186 AKAP2Q9Y2D5 859 aa11.7□□□□□ -0.54
NUP50-215ENST00000484186 CSADQ9Y600 493 aa11.7□□□□□ -0.54
NUP50-215ENST00000484186 TFCP2Q12800 502 aa11.69□□□□□ -0.54
NUP50-215ENST00000484186 DIXDC1Q155Q3 683 aa11.69□□□□□ -0.54
NUP50-215ENST00000484186 ZKSCAN2Q63HK3 967 aa11.69□□□□□ -0.54
NUP50-215ENST00000484186 FAM151AQ8WW52 585 aa11.69□□□□□ -0.54
NUP50-215ENST00000484186 MS4A4AQ96JQ5 239 aa11.69□□□□□ -0.54
NUP50-215ENST00000484186 PTPN18Q99952 460 aa11.69□□□□□ -0.54
NUP50-215ENST00000484186 DAGLAQ9Y4D2 1042 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms